RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 YARSP54577 528 aaKnown RBP7.87□□□□□ -1.15
CCDC171-207ENST00000478913 RBM6P78332 1123 aaKnown RBP7.87□□□□□ -1.15
CCDC171-207ENST00000478913 ARID5AQ03989 594 aa7.87□□□□□ -1.15
CCDC171-207ENST00000478913 NFIAQ12857 509 aa7.87□□□□□ -1.15
CCDC171-207ENST00000478913 ARTNQ5T4W7 220 aa7.87□□□□□ -1.15
CCDC171-207ENST00000478913 PRAMEF13Q5VWM6 474 aa7.87□□□□□ -1.15
CCDC171-207ENST00000478913 CCDC81Q6ZN84 652 aa7.87□□□□□ -1.15
CCDC171-207ENST00000478913 GIMAP7Q8NHV1 300 aa7.87□□□□□ -1.15
CCDC171-207ENST00000478913 MFSD14AQ96MC6 490 aa7.87□□□□□ -1.15
CCDC171-207ENST00000478913 DPH2Q9BQC3 489 aaPredicted RBP7.87□□□□□ -1.15
CCDC171-207ENST00000478913 DBNDD2Q9BQY9 259 aa7.87□□□□□ -1.15
CCDC171-207ENST00000478913 GOLGA2P5Q9HBQ8 144 aa7.87□□□□□ -1.15
CCDC171-207ENST00000478913 ZNRF3Q9ULT6 936 aa7.87□□□□□ -1.15
CCDC171-207ENST00000478913 CST3P01034 146 aaPredicted RBP7.86□□□□□ -1.15
CCDC171-207ENST00000478913 LRRFIP1Q32MZ4 808 aaKnown RBP7.86□□□□□ -1.15
CCDC171-207ENST00000478913 ZAR1Q86SH2 424 aa7.86□□□□□ -1.15
CCDC171-207ENST00000478913 FBXL6Q8N531 539 aa7.86□□□□□ -1.15
CCDC171-207ENST00000478913 MFSD2AQ8NA29 543 aa7.86□□□□□ -1.15
CCDC171-207ENST00000478913 CPLX3Q8WVH0 158 aa7.86□□□□□ -1.15
CCDC171-207ENST00000478913 GMIPQ9P107 970 aa7.86□□□□□ -1.15
CCDC171-207ENST00000478913 ARHGEF40Q8TER5 1519 aa7.86□□□□□ -1.15
CCDC171-207ENST00000478913 ARHGEF12Q9NZN5 1544 aa7.85□□□□□ -1.15
CCDC171-207ENST00000478913 UPK3BL1B0FP48 263 aa7.85□□□□□ -1.15
CCDC171-207ENST00000478913 UPK3BL2E5RIL1 263 aa7.85□□□□□ -1.15
CCDC171-207ENST00000478913 IGLV1-40P01703 118 aa7.85□□□□□ -1.15
CCDC171-207ENST00000478913 OVOS1Q6IE37 1185 aa7.85□□□□□ -1.15
CCDC171-207ENST00000478913 TOP6BLQ8N6T0 577 aa7.85□□□□□ -1.15
CCDC171-207ENST00000478913 XAGE3Q8WTP9 111 aa7.85□□□□□ -1.15
CCDC171-207ENST00000478913 CRBNQ96SW2 442 aa7.85□□□□□ -1.15
CCDC171-207ENST00000478913 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.85□□□□□ -1.15
CCDC171-207ENST00000478913 SRRTQ9BXP5 876 aaKnown RBP7.85□□□□□ -1.15
CCDC171-207ENST00000478913 ZFP64Q9NPA5 681 aa7.85□□□□□ -1.15
CCDC171-207ENST00000478913 PRDM10Q9NQV6 1147 aa7.85□□□□□ -1.15
CCDC171-207ENST00000478913 STRIP2Q9ULQ0 834 aa7.85□□□□□ -1.15
CCDC171-207ENST00000478913 SIGLEC1Q9BZZ2 1709 aa7.85□□□□□ -1.15
CCDC171-207ENST00000478913 AFF2P51816 1311 aa7.84□□□□□ -1.15
CCDC171-207ENST00000478913 SLC22A31A6NKX4 558 aa7.84□□□□□ -1.15
CCDC171-207ENST00000478913 CHURC1-FNTBB4DL54 471 aa7.84□□□□□ -1.15
CCDC171-207ENST00000478913 DNAJA2O60884 412 aa7.84□□□□□ -1.15
CCDC171-207ENST00000478913 SSBP05455 408 aaKnown RBP eCLIP7.84□□□□□ -1.15
CCDC171-207ENST00000478913 FAM87AP0C7U9 286 aa7.84□□□□□ -1.15
CCDC171-207ENST00000478913 ADMP35318 185 aa7.84□□□□□ -1.15
CCDC171-207ENST00000478913 SLFN12Q8IYM2 578 aa7.84□□□□□ -1.15
CCDC171-207ENST00000478913 TMEM40Q8WWA1 233 aa7.84□□□□□ -1.15
CCDC171-207ENST00000478913 GATA6Q92908 595 aa7.84□□□□□ -1.15
CCDC171-207ENST00000478913 MIPEPQ99797 713 aa7.84□□□□□ -1.15
CCDC171-207ENST00000478913 ABCA5Q8WWZ7 1642 aa7.84□□□□□ -1.15
CCDC171-207ENST00000478913 JCADQ9P266 1359 aa7.84□□□□□ -1.16
CCDC171-207ENST00000478913 RUSC2Q8N2Y8 1516 aa7.83□□□□□ -1.16
CCDC171-207ENST00000478913 MEIS3P2A8K0S8 358 aa7.83□□□□□ -1.16
CCDC171-207ENST00000478913 F13BP05160 661 aa7.83□□□□□ -1.16
CCDC171-207ENST00000478913 EIF6P56537 245 aaKnown RBP7.83□□□□□ -1.16
CCDC171-207ENST00000478913 CYP27A1Q02318 531 aa7.83□□□□□ -1.16
CCDC171-207ENST00000478913 ARSHQ5FYA8 562 aa7.83□□□□□ -1.16
CCDC171-207ENST00000478913 PHACTR4Q8IZ21 702 aa7.83□□□□□ -1.16
CCDC171-207ENST00000478913 SHKBP1Q8TBC3 707 aa7.83□□□□□ -1.16
CCDC171-207ENST00000478913 DUSP23Q9BVJ7 150 aa7.83□□□□□ -1.16
CCDC171-207ENST00000478913 ANTXR1Q9H6X2 564 aa7.83□□□□□ -1.16
CCDC171-207ENST00000478913 FRMPD1Q5SYB0 1578 aa7.83□□□□□ -1.16
CCDC171-207ENST00000478913 LRP6O75581 1613 aa7.82□□□□□ -1.16
CCDC171-207ENST00000478913 FAM170BA6NMN3 283 aa7.82□□□□□ -1.16
CCDC171-207ENST00000478913 WDR64B1ANS9 1081 aa7.82□□□□□ -1.16
CCDC171-207ENST00000478913 FGRP09769 529 aa7.82□□□□□ -1.16
CCDC171-207ENST00000478913 RAG1P15918 1043 aa7.82□□□□□ -1.16
CCDC171-207ENST00000478913 FAM135BQ49AJ0 1406 aa7.82□□□□□ -1.16
CCDC171-207ENST00000478913 CYP27C1Q4G0S4 372 aa7.82□□□□□ -1.16
CCDC171-207ENST00000478913 LCE1DQ5T752 114 aa7.82□□□□□ -1.16
CCDC171-207ENST00000478913 OGFOD3Q6PK18 319 aa7.82□□□□□ -1.16
CCDC171-207ENST00000478913 NLRC3Q7RTR2 1065 aa7.82□□□□□ -1.16
CCDC171-207ENST00000478913 SLC51AQ86UW1 340 aa7.82□□□□□ -1.16
CCDC171-207ENST00000478913 CYB5D2Q8WUJ1 264 aa7.82□□□□□ -1.16
CCDC171-207ENST00000478913 GMLQ99445 158 aa7.82□□□□□ -1.16
CCDC171-207ENST00000478913 METTL22Q9BUU2 404 aaPredicted RBP7.82□□□□□ -1.16
CCDC171-207ENST00000478913 OSBPL1AQ9BXW6 950 aa7.82□□□□□ -1.16
CCDC171-207ENST00000478913 ATG3Q9NT62 314 aa7.82□□□□□ -1.16
CCDC171-207ENST00000478913 NHSL1Q5SYE7 1610 aa7.81□□□□□ -1.16
CCDC171-207ENST00000478913 ZCCHC11Q5TAX3 1644 aaKnown RBP7.81□□□□□ -1.16
CCDC171-207ENST00000478913 LEFTY1O75610 366 aa7.81□□□□□ -1.16
CCDC171-207ENST00000478913 SLITRK5O94991 958 aa7.81□□□□□ -1.16
CCDC171-207ENST00000478913 R3HDM1Q15032 1099 aaKnown RBP7.81□□□□□ -1.16
CCDC171-207ENST00000478913 PRSS36Q5K4E3 855 aa7.81□□□□□ -1.16
CCDC171-207ENST00000478913 CDCP2Q5VXM1 449 aa7.81□□□□□ -1.16
CCDC171-207ENST00000478913 DUSP27Q5VZP5 1158 aa7.81□□□□□ -1.16
CCDC171-207ENST00000478913 LETMD1Q6P1Q0 360 aa7.81□□□□□ -1.16
CCDC171-207ENST00000478913 ZNF765Q7L2R6 523 aa7.81□□□□□ -1.16
CCDC171-207ENST00000478913 LSRQ86X29 649 aaPredicted RBP7.81□□□□□ -1.16
CCDC171-207ENST00000478913 MCF2L2Q86YR7 1114 aa7.81□□□□□ -1.16
CCDC171-207ENST00000478913 SHISA5Q8N114 240 aa7.81□□□□□ -1.16
CCDC171-207ENST00000478913 RBBP8NLQ8NC74 664 aaPredicted RBP7.81□□□□□ -1.16
CCDC171-207ENST00000478913 ATG4CQ96DT6 458 aa7.81□□□□□ -1.16
CCDC171-207ENST00000478913 TANGO6Q9C0B7 1094 aa7.81□□□□□ -1.16
CCDC171-207ENST00000478913 CNNM2Q9H8M5 875 aa7.81□□□□□ -1.16
CCDC171-207ENST00000478913 ABCA10Q8WWZ4 1543 aa7.8□□□□□ -1.16
CCDC171-207ENST00000478913 NME1P15531 152 aaKnown RBP7.8□□□□□ -1.16
CCDC171-207ENST00000478913 HSPA6P17066 643 aa7.8□□□□□ -1.16
CCDC171-207ENST00000478913 GIPRP48546 466 aa7.8□□□□□ -1.16
CCDC171-207ENST00000478913 OR6P1Q8NGX9 317 aa7.8□□□□□ -1.16
CCDC171-207ENST00000478913 ANAPC16Q96DE5 110 aa7.8□□□□□ -1.16
CCDC171-207ENST00000478913 SHDQ96IW2 340 aa7.8□□□□□ -1.16
CCDC171-207ENST00000478913 CCDC74BQ96LY2 380 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms