RNA–Protein interactions for RNA: ENST00000478843.5

PRKCD-205, Transcript of protein kinase C delta, humanhuman

TSL 4

Gene PRKCD, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-205ENST00000478843 ABCB5Q2M3G0 1257 aa11.65□□□□□ -0.54
PRKCD-205ENST00000478843 SLC39A5Q6ZMH5 540 aa11.65□□□□□ -0.54
PRKCD-205ENST00000478843 MYLIPQ8WY64 445 aa11.65□□□□□ -0.54
PRKCD-205ENST00000478843 MOV10L1Q9BXT6 1211 aaKnown RBP11.65□□□□□ -0.54
PRKCD-205ENST00000478843 SEMA6BQ9H3T3 888 aa11.65□□□□□ -0.54
PRKCD-205ENST00000478843 KBTBD13C9JR72 458 aa11.64□□□□□ -0.55
PRKCD-205ENST00000478843 SEPT4O43236 478 aa11.64□□□□□ -0.55
PRKCD-205ENST00000478843 USP5P45974 858 aa11.64□□□□□ -0.55
PRKCD-205ENST00000478843 GABPAQ06546 454 aa11.64□□□□□ -0.55
PRKCD-205ENST00000478843 CERKLQ49MI3 558 aaPredicted RBP11.64□□□□□ -0.55
PRKCD-205ENST00000478843 ANO1Q5XXA6 986 aa11.64□□□□□ -0.55
PRKCD-205ENST00000478843 SH3RF1Q7Z6J0 888 aa11.64□□□□□ -0.55
PRKCD-205ENST00000478843 CERS3Q8IU89 383 aa11.64□□□□□ -0.55
PRKCD-205ENST00000478843 SHCBP1Q8NEM2 672 aa11.64□□□□□ -0.55
PRKCD-205ENST00000478843 SSH3Q8TE77 659 aa11.64□□□□□ -0.55
PRKCD-205ENST00000478843 BADQ92934 168 aa11.64□□□□□ -0.55
PRKCD-205ENST00000478843 PRDM5Q9NQX1 630 aaPredicted RBP11.64□□□□□ -0.55
PRKCD-205ENST00000478843 MYH7P12883 1935 aa11.64□□□□□ -0.55
PRKCD-205ENST00000478843 GREB1LQ9C091 1923 aaPredicted RBP11.64□□□□□ -0.55
PRKCD-205ENST00000478843 A0A1W2PRG0 241 aa11.63□□□□□ -0.55
PRKCD-205ENST00000478843 TRIM43BA6NCK2 446 aa11.63□□□□□ -0.55
PRKCD-205ENST00000478843 COBLO75128 1261 aa11.63□□□□□ -0.55
PRKCD-205ENST00000478843 IDH1O75874 414 aaKnown RBP11.63□□□□□ -0.55
PRKCD-205ENST00000478843 PLCD1P51178 756 aa11.63□□□□□ -0.55
PRKCD-205ENST00000478843 EVX2Q03828 476 aa11.63□□□□□ -0.55
PRKCD-205ENST00000478843 SEPT2Q15019 361 aa11.63□□□□□ -0.55
PRKCD-205ENST00000478843 LRRC41Q15345 812 aa11.63□□□□□ -0.55
PRKCD-205ENST00000478843 FAM47AQ5JRC9 791 aa11.63□□□□□ -0.55
PRKCD-205ENST00000478843 C1orf53Q5VUE5 145 aa11.63□□□□□ -0.55
PRKCD-205ENST00000478843 MAGEB6Q8N7X4 407 aa11.63□□□□□ -0.55
PRKCD-205ENST00000478843 ARRDC4Q8NCT1 418 aa11.63□□□□□ -0.55
PRKCD-205ENST00000478843 TRIM43Q96BQ3 446 aaPredicted RBP11.63□□□□□ -0.55
PRKCD-205ENST00000478843 RIOK1Q9BRS2 568 aaKnown RBP11.63□□□□□ -0.55
PRKCD-205ENST00000478843 SPATC1LQ9H0A9 340 aa11.63□□□□□ -0.55
PRKCD-205ENST00000478843 PRDM6Q9NQX0 595 aa11.63□□□□□ -0.55
PRKCD-205ENST00000478843 TRANK1O15050 2925 aa11.63□□□□□ -0.55
PRKCD-205ENST00000478843 TMEM265A0A087WTH1 108 aa11.62□□□□□ -0.55
PRKCD-205ENST00000478843 STRNO43815 780 aa11.62□□□□□ -0.55
PRKCD-205ENST00000478843 FOSL2P15408 326 aa11.62□□□□□ -0.55
PRKCD-205ENST00000478843 ERCC3P19447 782 aa11.62□□□□□ -0.55
PRKCD-205ENST00000478843 ITGB8P26012 769 aa11.62□□□□□ -0.55
PRKCD-205ENST00000478843 ADCYAP1R1P41586 468 aa11.62□□□□□ -0.55
PRKCD-205ENST00000478843 OS9Q13438 667 aaPredicted RBP11.62□□□□□ -0.55
PRKCD-205ENST00000478843 KIAA1755Q5JYT7 1200 aa11.62□□□□□ -0.55
PRKCD-205ENST00000478843 DPP9Q86TI2 863 aa11.62□□□□□ -0.55
PRKCD-205ENST00000478843 TTC6Q86TZ1 520 aa11.62□□□□□ -0.55
PRKCD-205ENST00000478843 ANTXR1Q9H6X2 564 aa11.62□□□□□ -0.55
PRKCD-205ENST00000478843 CABP5Q9NP86 173 aa11.62□□□□□ -0.55
PRKCD-205ENST00000478843 PHF24Q9UPV7 400 aa11.62□□□□□ -0.55
PRKCD-205ENST00000478843 NOP58Q9Y2X3 529 aaKnown RBP11.62□□□□□ -0.55
PRKCD-205ENST00000478843 GBF1Q92538 1859 aa11.61□□□□□ -0.55
PRKCD-205ENST00000478843 NCOR1O75376 2440 aa11.61□□□□□ -0.55
PRKCD-205ENST00000478843 EPHB4P54760 987 aa11.61□□□□□ -0.55
PRKCD-205ENST00000478843 COG2Q14746 738 aa11.61□□□□□ -0.55
PRKCD-205ENST00000478843 TMED8Q6PL24 325 aaPredicted RBP11.61□□□□□ -0.55
PRKCD-205ENST00000478843 ABRAQ8N0Z2 381 aa11.61□□□□□ -0.55
PRKCD-205ENST00000478843 TMEM57Q8N5G2 664 aa11.61□□□□□ -0.55
PRKCD-205ENST00000478843 FERMT2Q96AC1 680 aa11.61□□□□□ -0.55
PRKCD-205ENST00000478843 CLUAP1Q96AJ1 413 aa11.61□□□□□ -0.55
PRKCD-205ENST00000478843 EAF2Q96CJ1 260 aaPredicted RBP11.61□□□□□ -0.55
PRKCD-205ENST00000478843 MAML3Q96JK9 1138 aa11.61□□□□□ -0.55
PRKCD-205ENST00000478843 TANGO6Q9C0B7 1094 aa11.61□□□□□ -0.55
PRKCD-205ENST00000478843 CCDC8Q9H0W5 538 aaPredicted RBP11.61□□□□□ -0.55
PRKCD-205ENST00000478843 MCM3APO60318 1980 aa11.6□□□□□ -0.55
PRKCD-205ENST00000478843 IPO8O15397 1037 aaKnown RBP11.6□□□□□ -0.55
PRKCD-205ENST00000478843 SURF6O75683 361 aaKnown RBP11.6□□□□□ -0.55
PRKCD-205ENST00000478843 BCAR3O75815 825 aa11.6□□□□□ -0.55
PRKCD-205ENST00000478843 ATP8B2P98198 1209 aa11.6□□□□□ -0.55
PRKCD-205ENST00000478843 TLE2Q04725 743 aa11.6□□□□□ -0.55
PRKCD-205ENST00000478843 PRAMEF19Q5SWL8 479 aa11.6□□□□□ -0.55
PRKCD-205ENST00000478843 CLEC10AQ8IUN9 316 aa11.6□□□□□ -0.55
PRKCD-205ENST00000478843 MB21D1Q8N884 522 aa11.6□□□□□ -0.55
PRKCD-205ENST00000478843 USP38Q8NB14 1042 aa11.6□□□□□ -0.55
PRKCD-205ENST00000478843 FRAT1Q92837 279 aaPredicted RBP11.6□□□□□ -0.55
PRKCD-205ENST00000478843 ATG4CQ96DT6 458 aa11.6□□□□□ -0.55
PRKCD-205ENST00000478843 RNPC3Q96LT9 517 aaKnown RBP11.6□□□□□ -0.55
PRKCD-205ENST00000478843 MROH8Q9H579 483 aa11.6□□□□□ -0.55
PRKCD-205ENST00000478843 C1orf115Q9H7X2 142 aa11.6□□□□□ -0.55
PRKCD-205ENST00000478843 XIRP2A4UGR9 3374 aa11.6□□□□□ -0.55
PRKCD-205ENST00000478843 LRRC37A2A6NM11 1700 aa11.6□□□□□ -0.55
PRKCD-205ENST00000478843 KIAA0355O15063 1070 aa11.59□□□□□ -0.55
PRKCD-205ENST00000478843 MYCNP04198 464 aaPredicted RBP11.59□□□□□ -0.55
PRKCD-205ENST00000478843 CLTBP09497 229 aa11.59□□□□□ -0.55
PRKCD-205ENST00000478843 DSG3P32926 999 aa11.59□□□□□ -0.55
PRKCD-205ENST00000478843 MAP3K12Q12852 859 aa11.59□□□□□ -0.55
PRKCD-205ENST00000478843 SLC44A5Q8NCS7 719 aa11.59□□□□□ -0.55
PRKCD-205ENST00000478843 YTHDC1Q96MU7 727 aaKnown RBP11.59□□□□□ -0.55
PRKCD-205ENST00000478843 XPNPEP3Q9NQH7 507 aa11.59□□□□□ -0.55
PRKCD-205ENST00000478843 HOXC10Q9NYD6 342 aa11.59□□□□□ -0.55
PRKCD-205ENST00000478843 NRBP1Q9UHY1 535 aa11.59□□□□□ -0.55
PRKCD-205ENST00000478843 A0A1W2PQ45 241 aaPredicted RBP11.58□□□□□ -0.56
PRKCD-205ENST00000478843 A0A1W2PQY0 241 aa11.58□□□□□ -0.56
PRKCD-205ENST00000478843 MPHOSPH10O00566 681 aaKnown RBP11.58□□□□□ -0.56
PRKCD-205ENST00000478843 FLOT1O75955 427 aa11.58□□□□□ -0.56
PRKCD-205ENST00000478843 TMEM132BQ14DG7 1078 aa11.58□□□□□ -0.56
PRKCD-205ENST00000478843 TMEM179Q6ZVK1 233 aa11.58□□□□□ -0.56
PRKCD-205ENST00000478843 NCAPG2Q86XI2 1143 aa11.58□□□□□ -0.56
PRKCD-205ENST00000478843 LENG1Q96BZ8 264 aaPredicted RBP11.58□□□□□ -0.56
PRKCD-205ENST00000478843 SLC5A4Q9NY91 659 aa11.58□□□□□ -0.56
PRKCD-205ENST00000478843 TACC3Q9Y6A5 838 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms