RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 HERVK_113P62684 666 aa11.84□□□□□ -0.51
SCAMP3-206ENST00000478737 IRX3P78415 501 aaPredicted RBP11.84□□□□□ -0.51
SCAMP3-206ENST00000478737 KIAA1755Q5JYT7 1200 aa11.84□□□□□ -0.51
SCAMP3-206ENST00000478737 CWC27Q6UX04 472 aaKnown RBP11.84□□□□□ -0.51
SCAMP3-206ENST00000478737 NEDD1Q8NHV4 660 aa11.84□□□□□ -0.51
SCAMP3-206ENST00000478737 ARMC5Q96C12 935 aa11.84□□□□□ -0.51
SCAMP3-206ENST00000478737 SH2D4AQ9H788 454 aa11.84□□□□□ -0.51
SCAMP3-206ENST00000478737 VCPKMTQ9H867 229 aa11.84□□□□□ -0.51
SCAMP3-206ENST00000478737 HOXC10Q9NYD6 342 aa11.84□□□□□ -0.51
SCAMP3-206ENST00000478737 SRRDQ9UH36 339 aa11.84□□□□□ -0.51
SCAMP3-206ENST00000478737 TACC3Q9Y6A5 838 aa11.84□□□□□ -0.51
SCAMP3-206ENST00000478737 PRDM1O75626 825 aa11.83□□□□□ -0.52
SCAMP3-206ENST00000478737 NOVP48745 357 aa11.83□□□□□ -0.52
SCAMP3-206ENST00000478737 FCGRTP55899 365 aa11.83□□□□□ -0.52
SCAMP3-206ENST00000478737 COG2Q14746 738 aa11.83□□□□□ -0.52
SCAMP3-206ENST00000478737 CLEC10AQ8IUN9 316 aa11.83□□□□□ -0.52
SCAMP3-206ENST00000478737 GPRC5AQ8NFJ5 357 aa11.83□□□□□ -0.52
SCAMP3-206ENST00000478737 TXNRD2Q9NNW7 524 aa11.83□□□□□ -0.52
SCAMP3-206ENST00000478737 MTMR4Q9NYA4 1195 aa11.83□□□□□ -0.52
SCAMP3-206ENST00000478737 PLIN4Q96Q06 1357 aa11.82□□□□□ -0.52
SCAMP3-206ENST00000478737 CDC45O75419 566 aa11.82□□□□□ -0.52
SCAMP3-206ENST00000478737 FMNL1O95466 1100 aaPredicted RBP11.82□□□□□ -0.52
SCAMP3-206ENST00000478737 PCP11498 1178 aaKnown RBP11.82□□□□□ -0.52
SCAMP3-206ENST00000478737 CHMLP26374 656 aa11.82□□□□□ -0.52
SCAMP3-206ENST00000478737 RGS19P49795 217 aa11.82□□□□□ -0.52
SCAMP3-206ENST00000478737 NT5C2P49902 561 aa11.82□□□□□ -0.52
SCAMP3-206ENST00000478737 ZYXQ15942 572 aaKnown RBP11.82□□□□□ -0.52
SCAMP3-206ENST00000478737 Q3C1V9 767 aa11.82□□□□□ -0.52
SCAMP3-206ENST00000478737 RUFY2Q8WXA3 655 aa11.82□□□□□ -0.52
SCAMP3-206ENST00000478737 DSCC1Q9BVC3 393 aa11.82□□□□□ -0.52
SCAMP3-206ENST00000478737 IL25Q9H293 177 aa11.82□□□□□ -0.52
SCAMP3-206ENST00000478737 RPAP3Q9H6T3 665 aaPredicted RBP11.82□□□□□ -0.52
SCAMP3-206ENST00000478737 INCENPQ9NQS7 918 aa11.82□□□□□ -0.52
SCAMP3-206ENST00000478737 ADAMTS5Q9UNA0 930 aa11.82□□□□□ -0.52
SCAMP3-206ENST00000478737 RABGAP1Q9Y3P9 1069 aa11.82□□□□□ -0.52
SCAMP3-206ENST00000478737 CCDC85CA6NKD9 419 aa11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 WDR46O15213 610 aaKnown RBP11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 CNMDO75829 334 aa11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 TTLL1O95922 423 aa11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 DSG3P32926 999 aa11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 TFAP4Q01664 338 aa11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 CTDSPL2Q05D32 466 aa11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 IRF5Q13568 498 aa11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 PPP4R3BQ5MIZ7 849 aa11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 CASC1Q6TDU7 716 aa11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 STK11IPQ8N1F8 1099 aa11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 CEP95Q96GE4 821 aa11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 NBPF3Q9H094 633 aa11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 IL17RBQ9NRM6 502 aa11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 GJD2Q9UKL4 321 aa11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 PTCH2Q9Y6C5 1203 aa11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 LOC285556D6RIA3 1793 aa11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 MYPNQ86TC9 1320 aa11.81□□□□□ -0.52
SCAMP3-206ENST00000478737 HTTP42858 3142 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 SPDYE16A6NNV3 312 aaPredicted RBP11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 F5H6K3 240 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 TNPO2O14787 897 aaKnown RBP11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 TSPY3P0CV98 308 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 TSPY8P0CW00 308 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 ERVK-9P63128 1117 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 ERVK-24P63145 666 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 KLRC3Q07444 240 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 C8orf34Q49A92 452 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 FAM47AQ5JRC9 791 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 AKNAD1Q5T1N1 836 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 SPICE1Q8N0Z3 855 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 MB21D1Q8N884 522 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 GMCL1P1Q8NEA9 526 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 PXYLP1Q8TE99 480 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 STAG1Q8WVM7 1258 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 GOPCQ9HD26 462 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 TCP11L1Q9NUJ3 509 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 CLIP2Q9UDT6 1046 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 CTNNA3Q9UI47 895 aa11.8□□□□□ -0.52
SCAMP3-206ENST00000478737 ZNF213O14771 459 aa11.79□□□□□ -0.52
SCAMP3-206ENST00000478737 SGSM2O43147 1006 aa11.79□□□□□ -0.52
SCAMP3-206ENST00000478737 PEX10O60683 326 aa11.79□□□□□ -0.52
SCAMP3-206ENST00000478737 MAPK4P31152 587 aa11.79□□□□□ -0.52
SCAMP3-206ENST00000478737 FLT3LGP49771 235 aa11.79□□□□□ -0.52
SCAMP3-206ENST00000478737 ATP2B2Q01814 1243 aa11.79□□□□□ -0.52
SCAMP3-206ENST00000478737 PRKCZQ05513 592 aa11.79□□□□□ -0.52
SCAMP3-206ENST00000478737 NBPF11Q86T75 865 aa11.79□□□□□ -0.52
SCAMP3-206ENST00000478737 COA7Q96BR5 231 aa11.79□□□□□ -0.52
SCAMP3-206ENST00000478737 ZNF333Q96JL9 665 aa11.79□□□□□ -0.52
SCAMP3-206ENST00000478737 ESYT1Q9BSJ8 1104 aa11.79□□□□□ -0.52
SCAMP3-206ENST00000478737 BTBD7Q9P203 1132 aa11.79□□□□□ -0.52
SCAMP3-206ENST00000478737 GABRQQ9UN88 632 aa11.79□□□□□ -0.52
SCAMP3-206ENST00000478737 TSPY2A6NKD2 308 aa11.78□□□□□ -0.52
SCAMP3-206ENST00000478737 CAPN15O75808 1086 aa11.78□□□□□ -0.52
SCAMP3-206ENST00000478737 NDUFB10O96000 172 aa11.78□□□□□ -0.52
SCAMP3-206ENST00000478737 CCNA1P78396 465 aa11.78□□□□□ -0.52
SCAMP3-206ENST00000478737 MFSD6Q6ZSS7 791 aa11.78□□□□□ -0.52
SCAMP3-206ENST00000478737 TBC1D10CQ8IV04 446 aa11.78□□□□□ -0.52
SCAMP3-206ENST00000478737 USP6NLQ92738 828 aa11.78□□□□□ -0.52
SCAMP3-206ENST00000478737 TTC14Q96N46 770 aa11.78□□□□□ -0.52
SCAMP3-206ENST00000478737 TANGO6Q9C0B7 1094 aa11.78□□□□□ -0.52
SCAMP3-206ENST00000478737 RNF41Q9H4P4 317 aaPredicted RBP11.78□□□□□ -0.52
SCAMP3-206ENST00000478737 PARP14Q460N5 1801 aa11.78□□□□□ -0.52
SCAMP3-206ENST00000478737 RANBP6O60518 1105 aaKnown RBP11.77□□□□□ -0.53
SCAMP3-206ENST00000478737 NMT2O60551 498 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms