RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ZFYP08048 801 aaPredicted RBP17.34■□□□□ 0.37
SMARCE1-209ENST00000478349 PTPREP23469 700 aa17.34■□□□□ 0.37
SMARCE1-209ENST00000478349 ATP2B2Q01814 1243 aa17.34■□□□□ 0.37
SMARCE1-209ENST00000478349 TRIM32Q13049 653 aa17.34■□□□□ 0.37
SMARCE1-209ENST00000478349 C12orf60Q5U649 245 aa17.34■□□□□ 0.37
SMARCE1-209ENST00000478349 C16orf86Q6ZW13 317 aa17.34■□□□□ 0.37
SMARCE1-209ENST00000478349 SHCBP1Q8NEM2 672 aa17.34■□□□□ 0.37
SMARCE1-209ENST00000478349 KANSL2Q9H9L4 492 aa17.34■□□□□ 0.37
SMARCE1-209ENST00000478349 ZNF287Q9HBT7 754 aa17.34■□□□□ 0.37
SMARCE1-209ENST00000478349 USP17L12C9JPN9 530 aa17.33■□□□□ 0.36
SMARCE1-209ENST00000478349 USP17L21D6R901 530 aa17.33■□□□□ 0.36
SMARCE1-209ENST00000478349 WDR46O15213 610 aaKnown RBP17.33■□□□□ 0.36
SMARCE1-209ENST00000478349 PEX10O60683 326 aa17.33■□□□□ 0.36
SMARCE1-209ENST00000478349 CNMDO75829 334 aa17.33■□□□□ 0.36
SMARCE1-209ENST00000478349 FLOT1O75955 427 aa17.33■□□□□ 0.36
SMARCE1-209ENST00000478349 HOXC6P09630 235 aa17.33■□□□□ 0.36
SMARCE1-209ENST00000478349 CYP2D6P10635 497 aa17.33■□□□□ 0.36
SMARCE1-209ENST00000478349 CACNB2Q08289 660 aaPredicted RBP17.33■□□□□ 0.36
SMARCE1-209ENST00000478349 GRB14Q14449 540 aa17.33■□□□□ 0.36
SMARCE1-209ENST00000478349 C20orf194Q5TEA3 1177 aa17.33■□□□□ 0.36
SMARCE1-209ENST00000478349 GIMAP6Q6P9H5 292 aa17.33■□□□□ 0.36
SMARCE1-209ENST00000478349 SLC44A5Q8NCS7 719 aa17.33■□□□□ 0.36
SMARCE1-209ENST00000478349 VCPKMTQ9H867 229 aa17.33■□□□□ 0.36
SMARCE1-209ENST00000478349 GOPCQ9HD26 462 aa17.33■□□□□ 0.36
SMARCE1-209ENST00000478349 ZBTB47Q9UFB7 747 aaPredicted RBP17.33■□□□□ 0.36
SMARCE1-209ENST00000478349 TMX2Q9Y320 296 aa17.33■□□□□ 0.36
SMARCE1-209ENST00000478349 ERC2O15083 957 aa17.32■□□□□ 0.36
SMARCE1-209ENST00000478349 PRKAB2O43741 272 aa17.32■□□□□ 0.36
SMARCE1-209ENST00000478349 GNAT2P19087 354 aa17.32■□□□□ 0.36
SMARCE1-209ENST00000478349 CDK8P49336 464 aa17.32■□□□□ 0.36
SMARCE1-209ENST00000478349 DPP9Q86TI2 863 aa17.32■□□□□ 0.36
SMARCE1-209ENST00000478349 KBTBD3Q8NAB2 608 aa17.32■□□□□ 0.36
SMARCE1-209ENST00000478349 DIS3LQ8TF46 1054 aaKnown RBP17.32■□□□□ 0.36
SMARCE1-209ENST00000478349 DYNLL2Q96FJ2 89 aa17.32■□□□□ 0.36
SMARCE1-209ENST00000478349 SPATC1LQ9H0A9 340 aa17.32■□□□□ 0.36
SMARCE1-209ENST00000478349 MROH8Q9H579 483 aa17.32■□□□□ 0.36
SMARCE1-209ENST00000478349 DCTPP1Q9H773 170 aa17.32■□□□□ 0.36
SMARCE1-209ENST00000478349 BTBD7Q9P203 1132 aa17.32■□□□□ 0.36
SMARCE1-209ENST00000478349 RBM27Q9P2N5 1060 aaKnown RBP17.32■□□□□ 0.36
SMARCE1-209ENST00000478349 CEP290O15078 2479 aa17.32■□□□□ 0.36
SMARCE1-209ENST00000478349 A0A1W2PRG0 241 aa17.31■□□□□ 0.36
SMARCE1-209ENST00000478349 AKR1B1P15121 316 aa17.31■□□□□ 0.36
SMARCE1-209ENST00000478349 COPB2P35606 906 aa17.31■□□□□ 0.36
SMARCE1-209ENST00000478349 C7orf61Q8IZ16 206 aa17.31■□□□□ 0.36
SMARCE1-209ENST00000478349 ABRAQ8N0Z2 381 aa17.31■□□□□ 0.36
SMARCE1-209ENST00000478349 APPBP2Q92624 585 aa17.31■□□□□ 0.36
SMARCE1-209ENST00000478349 SMARCA5O60264 1052 aaPredicted RBP17.3■□□□□ 0.36
SMARCE1-209ENST00000478349 PLS1Q14651 629 aa17.3■□□□□ 0.36
SMARCE1-209ENST00000478349 CCL14Q16627 93 aa17.3■□□□□ 0.36
SMARCE1-209ENST00000478349 MOV10L1Q9BXT6 1211 aaKnown RBP17.3■□□□□ 0.36
SMARCE1-209ENST00000478349 PUS7LQ9H0K6 701 aaKnown RBP17.3■□□□□ 0.36
SMARCE1-209ENST00000478349 TTC41PQ6P2S7 1318 aa17.29■□□□□ 0.36
SMARCE1-209ENST00000478349 SLC25A27O95847 323 aa17.29■□□□□ 0.36
SMARCE1-209ENST00000478349 ADORA2AP29274 412 aa17.29■□□□□ 0.36
SMARCE1-209ENST00000478349 CNGA1P29973 690 aa17.29■□□□□ 0.36
SMARCE1-209ENST00000478349 DSG3P32926 999 aa17.29■□□□□ 0.36
SMARCE1-209ENST00000478349 SBK1Q52WX2 424 aa17.29■□□□□ 0.36
SMARCE1-209ENST00000478349 OLFML2BQ68BL8 750 aa17.29■□□□□ 0.36
SMARCE1-209ENST00000478349 CTR9Q6PD62 1173 aa17.29■□□□□ 0.36
SMARCE1-209ENST00000478349 POTEEQ6S8J3 1075 aa17.29■□□□□ 0.36
SMARCE1-209ENST00000478349 SPICE1Q8N0Z3 855 aa17.29■□□□□ 0.36
SMARCE1-209ENST00000478349 NACAP1Q9BZK3 213 aa17.29■□□□□ 0.36
SMARCE1-209ENST00000478349 MKNK2Q9HBH9 465 aa17.29■□□□□ 0.36
SMARCE1-209ENST00000478349 DDX20Q9UHI6 824 aaKnown RBP17.29■□□□□ 0.36
SMARCE1-209ENST00000478349 RNF113AO15541 343 aaKnown RBP17.28■□□□□ 0.36
SMARCE1-209ENST00000478349 ERCC3P19447 782 aa17.28■□□□□ 0.36
SMARCE1-209ENST00000478349 CCND3P30281 292 aaPredicted RBP17.28■□□□□ 0.36
SMARCE1-209ENST00000478349 TDO2P48775 406 aa17.28■□□□□ 0.36
SMARCE1-209ENST00000478349 NCAPG2Q86XI2 1143 aa17.28■□□□□ 0.36
SMARCE1-209ENST00000478349 STRBPQ96SI9 672 aaKnown RBP17.28■□□□□ 0.36
SMARCE1-209ENST00000478349 CYP2D7A0A087X1C5 515 aa17.27■□□□□ 0.36
SMARCE1-209ENST00000478349 RAD21O60216 631 aa17.27■□□□□ 0.36
SMARCE1-209ENST00000478349 SLC3A2P08195 630 aaKnown RBP17.27■□□□□ 0.36
SMARCE1-209ENST00000478349 FCER1AP12319 257 aa17.27■□□□□ 0.36
SMARCE1-209ENST00000478349 EEF2P13639 858 aaKnown RBP17.27■□□□□ 0.36
SMARCE1-209ENST00000478349 EVX2Q03828 476 aa17.27■□□□□ 0.36
SMARCE1-209ENST00000478349 SLFNL1Q499Z3 407 aa17.27■□□□□ 0.36
SMARCE1-209ENST00000478349 PRO3102Q9H379 93 aa17.27■□□□□ 0.36
SMARCE1-209ENST00000478349 ROBO3Q96MS0 1386 aa17.27■□□□□ 0.35
SMARCE1-209ENST00000478349 APPP05067 770 aa17.26■□□□□ 0.35
SMARCE1-209ENST00000478349 KCTD2Q14681 263 aa17.26■□□□□ 0.35
SMARCE1-209ENST00000478349 LHX8Q68G74 356 aa17.26■□□□□ 0.35
SMARCE1-209ENST00000478349 SAMD1Q6SPF0 538 aaPredicted RBP17.26■□□□□ 0.35
SMARCE1-209ENST00000478349 CLEC10AQ8IUN9 316 aa17.26■□□□□ 0.35
SMARCE1-209ENST00000478349 ATG4CQ96DT6 458 aa17.26■□□□□ 0.35
SMARCE1-209ENST00000478349 PLXNB2O15031 1838 aa17.26■□□□□ 0.35
SMARCE1-209ENST00000478349 TRIOBPQ9H2D6 2365 aa17.25■□□□□ 0.35
SMARCE1-209ENST00000478349 MINDY4BA8MYZ0 360 aa17.25■□□□□ 0.35
SMARCE1-209ENST00000478349 DNM1LO00429 736 aa17.25■□□□□ 0.35
SMARCE1-209ENST00000478349 GPAA1O43292 621 aa17.25■□□□□ 0.35
SMARCE1-209ENST00000478349 COL6A1P12109 1028 aa17.25■□□□□ 0.35
SMARCE1-209ENST00000478349 BMP8BP34820 402 aa17.25■□□□□ 0.35
SMARCE1-209ENST00000478349 MNX1P50219 401 aaPredicted RBP17.25■□□□□ 0.35
SMARCE1-209ENST00000478349 PPP4R3BQ5MIZ7 849 aa17.25■□□□□ 0.35
SMARCE1-209ENST00000478349 ARRDC4Q8NCT1 418 aa17.25■□□□□ 0.35
SMARCE1-209ENST00000478349 NRBP1Q9UHY1 535 aa17.25■□□□□ 0.35
SMARCE1-209ENST00000478349 SYNPO2Q9UMS6 1093 aa17.25■□□□□ 0.35
SMARCE1-209ENST00000478349 CTDP1Q9Y5B0 961 aaPredicted RBP17.25■□□□□ 0.35
SMARCE1-209ENST00000478349 ZNF236Q9UL36 1845 aa17.25■□□□□ 0.35
SMARCE1-209ENST00000478349 DOCK3Q8IZD9 2030 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms