RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 CWC27Q6UX04 472 aaKnown RBP27.07■■□□□ 1.92
TRAF4-211ENST00000478021 ARMC5Q96C12 935 aa27.07■■□□□ 1.92
TRAF4-211ENST00000478021 TANGO6Q9C0B7 1094 aa27.07■■□□□ 1.92
TRAF4-211ENST00000478021 VCPKMTQ9H867 229 aa27.07■■□□□ 1.92
TRAF4-211ENST00000478021 MYH4Q9Y623 1939 aa27.07■■□□□ 1.92
TRAF4-211ENST00000478021 MYCP01106 439 aaPredicted RBP27.06■■□□□ 1.92
TRAF4-211ENST00000478021 HSPD1P10809 573 aaKnown RBP27.06■■□□□ 1.92
TRAF4-211ENST00000478021 GPRC5AQ8NFJ5 357 aa27.06■■□□□ 1.92
TRAF4-211ENST00000478021 INCENPQ9NQS7 918 aa27.06■■□□□ 1.92
TRAF4-211ENST00000478021 RAD21O60216 631 aa27.05■■□□□ 1.92
TRAF4-211ENST00000478021 ERVK-9P63128 1117 aa27.05■■□□□ 1.92
TRAF4-211ENST00000478021 ERVK-24P63145 666 aa27.05■■□□□ 1.92
TRAF4-211ENST00000478021 ALX1Q15699 326 aa27.05■■□□□ 1.92
TRAF4-211ENST00000478021 Q3C1V9 767 aa27.05■■□□□ 1.92
TRAF4-211ENST00000478021 FAM47AQ5JRC9 791 aa27.05■■□□□ 1.92
TRAF4-211ENST00000478021 GTF3C2Q8WUA4 911 aaPredicted RBP27.05■■□□□ 1.92
TRAF4-211ENST00000478021 COA7Q96BR5 231 aa27.05■■□□□ 1.92
TRAF4-211ENST00000478021 RLFQ13129 1914 aa27.04■■□□□ 1.92
TRAF4-211ENST00000478021 SPDYE16A6NNV3 312 aaPredicted RBP27.04■■□□□ 1.92
TRAF4-211ENST00000478021 FGAP02671 866 aa27.04■■□□□ 1.92
TRAF4-211ENST00000478021 FLT3LGP49771 235 aa27.04■■□□□ 1.92
TRAF4-211ENST00000478021 NBPF11Q86T75 865 aa27.04■■□□□ 1.92
TRAF4-211ENST00000478021 LPAR1Q92633 364 aa27.04■■□□□ 1.92
TRAF4-211ENST00000478021 ZNF333Q96JL9 665 aa27.04■■□□□ 1.92
TRAF4-211ENST00000478021 TACC3Q9Y6A5 838 aa27.04■■□□□ 1.92
TRAF4-211ENST00000478021 PARP14Q460N5 1801 aa27.04■■□□□ 1.92
TRAF4-211ENST00000478021 IGKV6D-41A0A0C4DH26 115 aa27.03■■□□□ 1.92
TRAF4-211ENST00000478021 CNMDO75829 334 aa27.03■■□□□ 1.92
TRAF4-211ENST00000478021 SAMD1Q6SPF0 538 aaPredicted RBP27.03■■□□□ 1.92
TRAF4-211ENST00000478021 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.03■■□□□ 1.92
TRAF4-211ENST00000478021 PLXNB2O15031 1838 aa27.02■■□□□ 1.92
TRAF4-211ENST00000478021 HIP1O00291 1037 aa27.02■■□□□ 1.92
TRAF4-211ENST00000478021 TSPY3P0CV98 308 aa27.02■■□□□ 1.92
TRAF4-211ENST00000478021 TSPY8P0CW00 308 aa27.02■■□□□ 1.92
TRAF4-211ENST00000478021 GRK4P32298 578 aa27.02■■□□□ 1.92
TRAF4-211ENST00000478021 MFAP1P55081 439 aaKnown RBP27.02■■□□□ 1.92
TRAF4-211ENST00000478021 CEP95Q96GE4 821 aa27.02■■□□□ 1.92
TRAF4-211ENST00000478021 GOPCQ9HD26 462 aa27.02■■□□□ 1.92
TRAF4-211ENST00000478021 NYAP2Q9P242 653 aa27.02■■□□□ 1.92
TRAF4-211ENST00000478021 CLIP2Q9UDT6 1046 aa27.02■■□□□ 1.92
TRAF4-211ENST00000478021 RABGAP1Q9Y3P9 1069 aa27.02■■□□□ 1.92
TRAF4-211ENST00000478021 WDR46O15213 610 aaKnown RBP27.01■■□□□ 1.91
TRAF4-211ENST00000478021 RGS19P49795 217 aa27.01■■□□□ 1.91
TRAF4-211ENST00000478021 TFAP4Q01664 338 aa27.01■■□□□ 1.91
TRAF4-211ENST00000478021 PORCNQ9H237 461 aa27.01■■□□□ 1.91
TRAF4-211ENST00000478021 BTBD7Q9P203 1132 aa27.01■■□□□ 1.91
TRAF4-211ENST00000478021 ANAPC4Q9UJX5 808 aa27.01■■□□□ 1.91
TRAF4-211ENST00000478021 PLIN4Q96Q06 1357 aa27■■□□□ 1.91
TRAF4-211ENST00000478021 RBBP6Q7Z6E9 1792 aaKnown RBP27■■□□□ 1.91
TRAF4-211ENST00000478021 A0A0G2JMZ2 1700 aa27■■□□□ 1.91
TRAF4-211ENST00000478021 POTEFA5A3E0 1075 aa27■■□□□ 1.91
TRAF4-211ENST00000478021 FLOT1O75955 427 aa27■■□□□ 1.91
TRAF4-211ENST00000478021 HAND2P61296 217 aa27■■□□□ 1.91
TRAF4-211ENST00000478021 COG2Q14746 738 aa27■■□□□ 1.91
TRAF4-211ENST00000478021 LBX2Q6XYB7 198 aa27■■□□□ 1.91
TRAF4-211ENST00000478021 NEDD1Q8NHV4 660 aa27■■□□□ 1.91
TRAF4-211ENST00000478021 ZMYM6O95789 1325 aa26.99■■□□□ 1.91
TRAF4-211ENST00000478021 ADCY3O60266 1144 aa26.99■■□□□ 1.91
TRAF4-211ENST00000478021 ELNP15502 786 aa26.99■■□□□ 1.91
TRAF4-211ENST00000478021 CCAR1Q8IX12 1150 aaKnown RBP26.99■■□□□ 1.91
TRAF4-211ENST00000478021 TOMM22Q9NS69 142 aa26.99■■□□□ 1.91
TRAF4-211ENST00000478021 MTMR4Q9NYA4 1195 aa26.99■■□□□ 1.91
TRAF4-211ENST00000478021 BIN2Q9UBW5 565 aaPredicted RBP26.99■■□□□ 1.91
TRAF4-211ENST00000478021 TSPY2A6NKD2 308 aa26.98■■□□□ 1.91
TRAF4-211ENST00000478021 DSG3P32926 999 aa26.98■■□□□ 1.91
TRAF4-211ENST00000478021 FAM83BQ5T0W9 1011 aa26.98■■□□□ 1.91
TRAF4-211ENST00000478021 LRRC47Q8N1G4 583 aaKnown RBP26.98■■□□□ 1.91
TRAF4-211ENST00000478021 ATG4CQ96DT6 458 aa26.98■■□□□ 1.91
TRAF4-211ENST00000478021 NUP88Q99567 741 aaPredicted RBP26.98■■□□□ 1.91
TRAF4-211ENST00000478021 IL25Q9H293 177 aa26.98■■□□□ 1.91
TRAF4-211ENST00000478021 HOXC10Q9NYD6 342 aa26.98■■□□□ 1.91
TRAF4-211ENST00000478021 LAMA4Q16363 1823 aa26.97■■□□□ 1.91
TRAF4-211ENST00000478021 RANBP6O60518 1105 aaKnown RBP26.97■■□□□ 1.91
TRAF4-211ENST00000478021 MAPK4P31152 587 aa26.97■■□□□ 1.91
TRAF4-211ENST00000478021 IRF5Q13568 498 aa26.97■■□□□ 1.91
TRAF4-211ENST00000478021 RRP12Q5JTH9 1297 aaKnown RBP26.97■■□□□ 1.91
TRAF4-211ENST00000478021 SKAP1Q86WV1 359 aa26.97■■□□□ 1.91
TRAF4-211ENST00000478021 SLAIN1Q8ND83 568 aa26.97■■□□□ 1.91
TRAF4-211ENST00000478021 CWC22Q9HCG8 908 aaKnown RBP26.97■■□□□ 1.91
TRAF4-211ENST00000478021 FBXO28Q9NVF7 368 aa26.97■■□□□ 1.91
TRAF4-211ENST00000478021 GJD2Q9UKL4 321 aa26.97■■□□□ 1.91
TRAF4-211ENST00000478021 COL11A1P12107 1806 aaPredicted RBP26.97■■□□□ 1.91
TRAF4-211ENST00000478021 F5H6K3 240 aa26.96■■□□□ 1.91
TRAF4-211ENST00000478021 TTLL1O95922 423 aa26.96■■□□□ 1.91
TRAF4-211ENST00000478021 MLLT1Q03111 559 aaPredicted RBP26.96■■□□□ 1.91
TRAF4-211ENST00000478021 KLRC3Q07444 240 aa26.96■■□□□ 1.91
TRAF4-211ENST00000478021 MTFR1Q15390 333 aa26.96■■□□□ 1.91
TRAF4-211ENST00000478021 WDR78Q5VTH9 848 aa26.96■■□□□ 1.91
TRAF4-211ENST00000478021 CENPQQ7L2Z9 268 aaPredicted RBP26.96■■□□□ 1.91
TRAF4-211ENST00000478021 GPR142Q7Z601 462 aa26.96■■□□□ 1.91
TRAF4-211ENST00000478021 TMEM106CQ9BVX2 250 aa26.96■■□□□ 1.91
TRAF4-211ENST00000478021 NBPF3Q9H094 633 aa26.96■■□□□ 1.91
TRAF4-211ENST00000478021 ORC4O43929 436 aa26.95■■□□□ 1.9
TRAF4-211ENST00000478021 NMT2O60551 498 aa26.95■■□□□ 1.9
TRAF4-211ENST00000478021 NDUFB10O96000 172 aa26.95■■□□□ 1.9
TRAF4-211ENST00000478021 CCNA1P78396 465 aa26.95■■□□□ 1.9
TRAF4-211ENST00000478021 PLEKHH3Q7Z736 793 aa26.94■■□□□ 1.9
TRAF4-211ENST00000478021 TBC1D10CQ8IV04 446 aa26.94■■□□□ 1.9
TRAF4-211ENST00000478021 MKL1Q969V6 931 aa26.94■■□□□ 1.9
TRAF4-211ENST00000478021 CENPFP49454 3210 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms