RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 PABPC4Q13310 644 aaKnown RBP eCLIP12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 IRF5Q13568 498 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 CCL14Q16627 93 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 ZNF589Q86UQ0 364 aaPredicted RBP12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 GPRC5AQ8NFJ5 357 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 USP6NLQ92738 828 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 FBXO28Q9NVF7 368 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 TMX2Q9Y320 296 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 ROBO3Q96MS0 1386 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 TRIOBPQ9H2D6 2365 aa12.25□□□□□ -0.45
LCLAT1-209ENST00000478015 INHAP05111 366 aa12.25□□□□□ -0.45
LCLAT1-209ENST00000478015 CHD1LQ86WJ1 897 aa12.25□□□□□ -0.45
LCLAT1-209ENST00000478015 TRIB2Q92519 343 aa12.25□□□□□ -0.45
LCLAT1-209ENST00000478015 ARPP21Q9UBL0 812 aaPredicted RBP12.25□□□□□ -0.45
LCLAT1-209ENST00000478015 A0A0G2JMZ2 1700 aa12.25□□□□□ -0.45
LCLAT1-209ENST00000478015 APPP05067 770 aa12.25□□□□□ -0.45
LCLAT1-209ENST00000478015 CYP2B6P20813 491 aa12.25□□□□□ -0.45
LCLAT1-209ENST00000478015 PDE4AP27815 886 aa12.25□□□□□ -0.45
LCLAT1-209ENST00000478015 GIMAP6Q6P9H5 292 aa12.25□□□□□ -0.45
LCLAT1-209ENST00000478015 GPR142Q7Z601 462 aa12.25□□□□□ -0.45
LCLAT1-209ENST00000478015 UBE2Q1Q7Z7E8 422 aa12.25□□□□□ -0.45
LCLAT1-209ENST00000478015 NUP88Q99567 741 aaPredicted RBP12.25□□□□□ -0.45
LCLAT1-209ENST00000478015 RNF208Q9H0X6 261 aa12.25□□□□□ -0.45
LCLAT1-209ENST00000478015 MYH4Q9Y623 1939 aa12.25□□□□□ -0.45
LCLAT1-209ENST00000478015 IGKV6D-41A0A0C4DH26 115 aa12.24□□□□□ -0.45
LCLAT1-209ENST00000478015 USP14P54578 494 aa12.24□□□□□ -0.45
LCLAT1-209ENST00000478015 MORN1Q5T089 497 aa12.24□□□□□ -0.45
LCLAT1-209ENST00000478015 LBX2Q6XYB7 198 aa12.24□□□□□ -0.45
LCLAT1-209ENST00000478015 SLAIN1Q8ND83 568 aa12.24□□□□□ -0.45
LCLAT1-209ENST00000478015 PXYLP1Q8TE99 480 aa12.24□□□□□ -0.45
LCLAT1-209ENST00000478015 COA7Q96BR5 231 aa12.24□□□□□ -0.45
LCLAT1-209ENST00000478015 TMEM106CQ9BVX2 250 aa12.24□□□□□ -0.45
LCLAT1-209ENST00000478015 IL25Q9H293 177 aa12.24□□□□□ -0.45
LCLAT1-209ENST00000478015 RWDD1Q9H446 243 aaPredicted RBP12.24□□□□□ -0.45
LCLAT1-209ENST00000478015 VCPKMTQ9H867 229 aa12.24□□□□□ -0.45
LCLAT1-209ENST00000478015 FLRT1Q9NZU1 646 aa12.24□□□□□ -0.45
LCLAT1-209ENST00000478015 PCDH10Q9P2E7 1040 aa12.24□□□□□ -0.45
LCLAT1-209ENST00000478015 BIN2Q9UBW5 565 aaPredicted RBP12.24□□□□□ -0.45
LCLAT1-209ENST00000478015 TDO2P48775 406 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 ATP2B2Q01814 1243 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 CTDSPL2Q05D32 466 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 FAM47AQ5JRC9 791 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 RASGRP2Q7LDG7 609 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 EVI5LQ96CN4 794 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 ATG4CQ96DT6 458 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 CCDC17Q96LX7 622 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 TANGO6Q9C0B7 1094 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 RABGAP1Q9Y3P9 1069 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 SMCHD1A6NHR9 2005 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 NMT2O60551 498 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 GJB1P08034 283 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 GJA8P48165 433 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 NMIQ13287 307 aaPredicted RBP12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 COG2Q14746 738 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 U2AF1L4Q8WU68 220 aaKnown RBP12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 CEP95Q96GE4 821 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 NBPF3Q9H094 633 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 KANSL2Q9H9L4 492 aa12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 PAK6Q9NQU5 681 aaPredicted RBP12.23□□□□□ -0.45
LCLAT1-209ENST00000478015 ZNFX1Q9P2E3 1918 aaKnown RBP12.22□□□□□ -0.45
LCLAT1-209ENST00000478015 GNAT2P19087 354 aa12.22□□□□□ -0.45
LCLAT1-209ENST00000478015 PPARAQ07869 468 aa12.22□□□□□ -0.45
LCLAT1-209ENST00000478015 AAMPQ13685 434 aa12.22□□□□□ -0.45
LCLAT1-209ENST00000478015 SAMD1Q6SPF0 538 aaPredicted RBP12.22□□□□□ -0.45
LCLAT1-209ENST00000478015 CHMP4CQ96CF2 233 aa12.22□□□□□ -0.45
LCLAT1-209ENST00000478015 DDRGK1Q96HY6 314 aa12.22□□□□□ -0.45
LCLAT1-209ENST00000478015 DEFB118Q96PH6 123 aa12.22□□□□□ -0.45
LCLAT1-209ENST00000478015 MOV10L1Q9BXT6 1211 aaKnown RBP12.22□□□□□ -0.45
LCLAT1-209ENST00000478015 OSBPL3Q9H4L5 887 aa12.22□□□□□ -0.45
LCLAT1-209ENST00000478015 IL17RBQ9NRM6 502 aa12.22□□□□□ -0.45
LCLAT1-209ENST00000478015 FLOT1O75955 427 aa12.21□□□□□ -0.45
LCLAT1-209ENST00000478015 IGHA2P01877 340 aa12.21□□□□□ -0.45
LCLAT1-209ENST00000478015 DSG3P32926 999 aa12.21□□□□□ -0.45
LCLAT1-209ENST00000478015 MNX1P50219 401 aaPredicted RBP12.21□□□□□ -0.45
LCLAT1-209ENST00000478015 TMEM132BQ14DG7 1078 aa12.21□□□□□ -0.45
LCLAT1-209ENST00000478015 FAM83BQ5T0W9 1011 aa12.21□□□□□ -0.45
LCLAT1-209ENST00000478015 MKNK2Q9HBH9 465 aa12.21□□□□□ -0.45
LCLAT1-209ENST00000478015 ADAMTS5Q9UNA0 930 aa12.21□□□□□ -0.45
LCLAT1-209ENST00000478015 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.21□□□□□ -0.45
LCLAT1-209ENST00000478015 FGAP02671 866 aa12.21□□□□□ -0.46
LCLAT1-209ENST00000478015 MAP3K21Q5TCX8 1036 aa12.21□□□□□ -0.46
LCLAT1-209ENST00000478015 PLEKHH3Q7Z736 793 aa12.21□□□□□ -0.46
LCLAT1-209ENST00000478015 SKAP1Q86WV1 359 aa12.21□□□□□ -0.46
LCLAT1-209ENST00000478015 NPLOC4Q8TAT6 608 aa12.21□□□□□ -0.46
LCLAT1-209ENST00000478015 DIS3LQ8TF46 1054 aaKnown RBP12.21□□□□□ -0.46
LCLAT1-209ENST00000478015 LPAR1Q92633 364 aa12.21□□□□□ -0.46
LCLAT1-209ENST00000478015 RILPL2Q969X0 211 aa12.21□□□□□ -0.46
LCLAT1-209ENST00000478015 NAPBQ9H115 298 aa12.21□□□□□ -0.46
LCLAT1-209ENST00000478015 ARHGEF10LQ9HCE6 1279 aa12.21□□□□□ -0.46
LCLAT1-209ENST00000478015 MTMR4Q9NYA4 1195 aa12.21□□□□□ -0.46
LCLAT1-209ENST00000478015 CLIP2Q9UDT6 1046 aa12.21□□□□□ -0.46
LCLAT1-209ENST00000478015 ALPK3Q96L96 1907 aa12.21□□□□□ -0.46
LCLAT1-209ENST00000478015 TRIM6-TRIM34B2RNG4 842 aa12.2□□□□□ -0.46
LCLAT1-209ENST00000478015 F5H6K3 240 aa12.2□□□□□ -0.46
LCLAT1-209ENST00000478015 SGPL1O95470 568 aa12.2□□□□□ -0.46
LCLAT1-209ENST00000478015 NDUFB10O96000 172 aa12.2□□□□□ -0.46
LCLAT1-209ENST00000478015 HMGCRP04035 888 aa12.2□□□□□ -0.46
LCLAT1-209ENST00000478015 HSPD1P10809 573 aaKnown RBP12.2□□□□□ -0.46
LCLAT1-209ENST00000478015 GSPT1P15170 499 aaKnown RBP12.2□□□□□ -0.46
LCLAT1-209ENST00000478015 ERCC3P19447 782 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms