RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 PNMA5Q96PV4 448 aa8.77□□□□□ -1.01
USP33-208ENST00000477949 CRAMP1Q96RY5 1269 aa8.77□□□□□ -1.01
USP33-208ENST00000477949 DNAJB12Q9NXW2 375 aaKnown RBP8.77□□□□□ -1.01
USP33-208ENST00000477949 TFIP11Q9UBB9 837 aaKnown RBP8.77□□□□□ -1.01
USP33-208ENST00000477949 CNOT7Q9UIV1 285 aaKnown RBP8.77□□□□□ -1.01
USP33-208ENST00000477949 CEMIPQ8WUJ3 1361 aa8.76□□□□□ -1.01
USP33-208ENST00000477949 IBTKQ9P2D0 1353 aaPredicted RBP8.76□□□□□ -1.01
USP33-208ENST00000477949 MUC3AQ02505 3323 aa8.76□□□□□ -1.01
USP33-208ENST00000477949 NUP98P52948 1817 aa8.76□□□□□ -1.01
USP33-208ENST00000477949 RGS9O75916 674 aaPredicted RBP8.76□□□□□ -1.01
USP33-208ENST00000477949 RAD17O75943 681 aa8.76□□□□□ -1.01
USP33-208ENST00000477949 AFF1P51825 1210 aaKnown RBP8.76□□□□□ -1.01
USP33-208ENST00000477949 RTN1Q16799 776 aa8.76□□□□□ -1.01
USP33-208ENST00000477949 ARTNQ5T4W7 220 aa8.76□□□□□ -1.01
USP33-208ENST00000477949 PSAPL1Q6NUJ1 521 aa8.76□□□□□ -1.01
USP33-208ENST00000477949 TXNRD3Q86VQ6 643 aa8.76□□□□□ -1.01
USP33-208ENST00000477949 C2orf69Q8N8R5 385 aa8.76□□□□□ -1.01
USP33-208ENST00000477949 R3HDMLQ9H3Y0 253 aa8.76□□□□□ -1.01
USP33-208ENST00000477949 HDAC9Q9UKV0 1011 aa8.76□□□□□ -1.01
USP33-208ENST00000477949 ZNF652Q9Y2D9 606 aa8.76□□□□□ -1.01
USP33-208ENST00000477949 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.76□□□□□ -1.01
USP33-208ENST00000477949 LRRC37AA6NMS7 1700 aa8.75□□□□□ -1.01
USP33-208ENST00000477949 FAM177BA6PVY3 158 aa8.75□□□□□ -1.01
USP33-208ENST00000477949 KIAA2012Q0VF49 1180 aa8.75□□□□□ -1.01
USP33-208ENST00000477949 FMNL2Q96PY5 1086 aa8.75□□□□□ -1.01
USP33-208ENST00000477949 HINFPQ9BQA5 517 aa8.75□□□□□ -1.01
USP33-208ENST00000477949 ZFP64Q9NPA5 681 aa8.75□□□□□ -1.01
USP33-208ENST00000477949 UBN2Q6ZU65 1347 aa8.75□□□□□ -1.01
USP33-208ENST00000477949 TGFBR3LH3BV60 316 aa8.74□□□□□ -1.01
USP33-208ENST00000477949 HMOX1P09601 288 aa8.74□□□□□ -1.01
USP33-208ENST00000477949 PCSK7Q16549 785 aa8.74□□□□□ -1.01
USP33-208ENST00000477949 DMRTC2Q8IXT2 367 aaPredicted RBP8.74□□□□□ -1.01
USP33-208ENST00000477949 DPF2Q92785 391 aa8.74□□□□□ -1.01
USP33-208ENST00000477949 PRO3102Q9H379 93 aa8.74□□□□□ -1.01
USP33-208ENST00000477949 DMGDHQ9UI17 866 aaKnown RBP8.74□□□□□ -1.01
USP33-208ENST00000477949 ATP6V0A2Q9Y487 856 aa8.74□□□□□ -1.01
USP33-208ENST00000477949 ASTN2O75129 1339 aaPredicted RBP8.74□□□□□ -1.01
USP33-208ENST00000477949 LAMB2P55268 1798 aa8.73□□□□□ -1.01
USP33-208ENST00000477949 KDM3BQ7LBC6 1761 aa8.73□□□□□ -1.01
USP33-208ENST00000477949 EN2P19622 333 aaPredicted RBP8.73□□□□□ -1.01
USP33-208ENST00000477949 NFKB1P19838 968 aa8.73□□□□□ -1.01
USP33-208ENST00000477949 TM4SF4P48230 202 aa8.73□□□□□ -1.01
USP33-208ENST00000477949 TNIP1Q15025 636 aa8.73□□□□□ -1.01
USP33-208ENST00000477949 TBC1D10BQ4KMP7 808 aaPredicted RBP8.73□□□□□ -1.01
USP33-208ENST00000477949 SHISA2Q6UWI4 295 aa8.73□□□□□ -1.01
USP33-208ENST00000477949 CDCA5Q96FF9 252 aa8.73□□□□□ -1.01
USP33-208ENST00000477949 BCL2L13Q9BXK5 485 aa8.73□□□□□ -1.01
USP33-208ENST00000477949 SCN9AQ15858 1988 aa8.73□□□□□ -1.01
USP33-208ENST00000477949 LAMB4A4D0S4 1761 aa8.73□□□□□ -1.01
USP33-208ENST00000477949 LAMB1P07942 1786 aa8.73□□□□□ -1.01
USP33-208ENST00000477949 H0YGN5 161 aa8.72□□□□□ -1.01
USP33-208ENST00000477949 H7C1D1 291 aa8.72□□□□□ -1.01
USP33-208ENST00000477949 TCERG1O14776 1098 aaKnown RBP8.72□□□□□ -1.01
USP33-208ENST00000477949 FKTNO75072 461 aa8.72□□□□□ -1.01
USP33-208ENST00000477949 NTSR2O95665 410 aa8.72□□□□□ -1.01
USP33-208ENST00000477949 EPB42P16452 691 aa8.72□□□□□ -1.01
USP33-208ENST00000477949 INTS3Q68E01 1043 aaKnown RBP8.72□□□□□ -1.01
USP33-208ENST00000477949 OTOP1Q7RTM1 612 aa8.72□□□□□ -1.01
USP33-208ENST00000477949 FMR1NBQ8N0W7 255 aaPredicted RBP8.72□□□□□ -1.01
USP33-208ENST00000477949 RPGRQ92834 1020 aaKnown RBP8.72□□□□□ -1.01
USP33-208ENST00000477949 ARMC5Q96C12 935 aa8.72□□□□□ -1.01
USP33-208ENST00000477949 GGA3Q9NZ52 723 aa8.72□□□□□ -1.01
USP33-208ENST00000477949 MAFBQ9Y5Q3 323 aaPredicted RBP8.72□□□□□ -1.01
USP33-208ENST00000477949 RTL9Q8NET4 1388 aa8.72□□□□□ -1.01
USP33-208ENST00000477949 LAMA3Q16787 3333 aa8.72□□□□□ -1.01
USP33-208ENST00000477949 ZNF609O15014 1411 aa8.71□□□□□ -1.01
USP33-208ENST00000477949 TTC28Q96AY4 2481 aa8.71□□□□□ -1.01
USP33-208ENST00000477949 PSMD14O00487 310 aa8.71□□□□□ -1.02
USP33-208ENST00000477949 MAP3K6O95382 1288 aa8.71□□□□□ -1.02
USP33-208ENST00000477949 PRKCSHP14314 528 aaPredicted RBP8.71□□□□□ -1.02
USP33-208ENST00000477949 IGFBP4P22692 258 aa8.71□□□□□ -1.02
USP33-208ENST00000477949 FKBP1BP68106 108 aa8.71□□□□□ -1.02
USP33-208ENST00000477949 CAP1Q01518 475 aa8.71□□□□□ -1.02
USP33-208ENST00000477949 TEFQ10587 303 aa8.71□□□□□ -1.02
USP33-208ENST00000477949 MOB2Q70IA6 237 aa8.71□□□□□ -1.02
USP33-208ENST00000477949 NPM2Q86SE8 214 aaKnown RBP8.71□□□□□ -1.02
USP33-208ENST00000477949 SUPT20HQ8NEM7 779 aa8.71□□□□□ -1.02
USP33-208ENST00000477949 RBM17Q96I25 401 aaKnown RBP8.71□□□□□ -1.02
USP33-208ENST00000477949 NYXQ9GZU5 481 aa8.71□□□□□ -1.02
USP33-208ENST00000477949 C11orf16Q9NQ32 467 aa8.71□□□□□ -1.02
USP33-208ENST00000477949 NAGPAQ9UK23 515 aa8.71□□□□□ -1.02
USP33-208ENST00000477949 ABCC4O15439 1325 aa8.71□□□□□ -1.02
USP33-208ENST00000477949 LAMA2P24043 3122 aaKnown RBP8.71□□□□□ -1.02
USP33-208ENST00000477949 ANKRD36CQ5JPF3 1778 aa8.71□□□□□ -1.02
USP33-208ENST00000477949 COL3A1P02461 1466 aaPredicted RBP8.7□□□□□ -1.02
USP33-208ENST00000477949 COL4A1P02462 1669 aa8.7□□□□□ -1.02
USP33-208ENST00000477949 INPP5BP32019 993 aa8.7□□□□□ -1.02
USP33-208ENST00000477949 SUSD4Q5VX71 490 aa8.7□□□□□ -1.02
USP33-208ENST00000477949 FAM35AQ86V20 835 aa8.7□□□□□ -1.02
USP33-208ENST00000477949 DTWD1Q8N5C7 304 aa8.7□□□□□ -1.02
USP33-208ENST00000477949 GLMNQ92990 594 aa8.7□□□□□ -1.02
USP33-208ENST00000477949 TP53INP1Q96A56 240 aa8.7□□□□□ -1.02
USP33-208ENST00000477949 DCPSQ96C86 337 aaKnown RBP8.7□□□□□ -1.02
USP33-208ENST00000477949 SNX27Q96L92 541 aa8.7□□□□□ -1.02
USP33-208ENST00000477949 DDX60Q8IY21 1712 aaKnown RBP8.7□□□□□ -1.02
USP33-208ENST00000477949 TAF1P21675 1872 aa8.7□□□□□ -1.02
USP33-208ENST00000477949 GNAT3A8MTJ3 354 aa8.69□□□□□ -1.02
USP33-208ENST00000477949 ERVV-1B6SEH8 477 aa8.69□□□□□ -1.02
USP33-208ENST00000477949 DPYDQ12882 1025 aa8.69□□□□□ -1.02
USP33-208ENST00000477949 PTK7Q13308 1070 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms