RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 CATSPERGQ6ZRH7 1159 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 ZNF365Q70YC5 407 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 ANKRD33Q7Z3H0 272 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 TEX11Q8IYF3 940 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 CRACR2BQ8N4Y2 399 aaPredicted RBP12□□□□□ -0.49
SMARCB1-206ENST00000477836 ZNF384Q8TF68 577 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 TOX2Q96NM4 488 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 TRIM34Q9BYJ4 488 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 DNAJC18Q9H819 358 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 CEP126Q9P2H0 1117 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 YBX2Q9Y2T7 364 aaKnown RBP12□□□□□ -0.49
SMARCB1-206ENST00000477836 IL16Q14005 1332 aa12□□□□□ -0.49
SMARCB1-206ENST00000477836 COBLO75128 1261 aa11.99□□□□□ -0.49
SMARCB1-206ENST00000477836 CSF2RAP15509 400 aa11.99□□□□□ -0.49
SMARCB1-206ENST00000477836 PSRC1Q6PGN9 363 aaPredicted RBP11.99□□□□□ -0.49
SMARCB1-206ENST00000477836 TMEM199Q8N511 208 aa11.99□□□□□ -0.49
SMARCB1-206ENST00000477836 FEZ1Q99689 392 aa11.99□□□□□ -0.49
SMARCB1-206ENST00000477836 DHX36Q9H2U1 1008 aaKnown RBP11.99□□□□□ -0.49
SMARCB1-206ENST00000477836 STARD7Q9NQZ5 370 aa11.99□□□□□ -0.49
SMARCB1-206ENST00000477836 GINM1Q9NU53 330 aa11.99□□□□□ -0.49
SMARCB1-206ENST00000477836 TBX21Q9UL17 535 aa11.99□□□□□ -0.49
SMARCB1-206ENST00000477836 ZNF236Q9UL36 1845 aa11.99□□□□□ -0.49
SMARCB1-206ENST00000477836 PI4K2BG5E9Z4 385 aa11.98□□□□□ -0.49
SMARCB1-206ENST00000477836 STRNO43815 780 aa11.98□□□□□ -0.49
SMARCB1-206ENST00000477836 LDHCP07864 332 aa11.98□□□□□ -0.49
SMARCB1-206ENST00000477836 GSTO1P78417 241 aa11.98□□□□□ -0.49
SMARCB1-206ENST00000477836 NHLH1Q02575 133 aa11.98□□□□□ -0.49
SMARCB1-206ENST00000477836 PPP2R2DQ66LE6 453 aa11.98□□□□□ -0.49
SMARCB1-206ENST00000477836 LBX2Q6XYB7 198 aa11.98□□□□□ -0.49
SMARCB1-206ENST00000477836 SH3RF3Q8TEJ3 882 aaPredicted RBP11.98□□□□□ -0.49
SMARCB1-206ENST00000477836 NSUN4Q96CB9 384 aaKnown RBP11.98□□□□□ -0.49
SMARCB1-206ENST00000477836 C12orf42Q96LP6 360 aa11.98□□□□□ -0.49
SMARCB1-206ENST00000477836 UIMC1Q96RL1 719 aa11.98□□□□□ -0.49
SMARCB1-206ENST00000477836 MOV10L1Q9BXT6 1211 aaKnown RBP11.98□□□□□ -0.49
SMARCB1-206ENST00000477836 SLC5A4Q9NY91 659 aa11.98□□□□□ -0.49
SMARCB1-206ENST00000477836 COG5Q9UP83 839 aa11.98□□□□□ -0.49
SMARCB1-206ENST00000477836 CFAP54Q96N23 3096 aa11.98□□□□□ -0.49
SMARCB1-206ENST00000477836 SMCHD1A6NHR9 2005 aa11.98□□□□□ -0.49
SMARCB1-206ENST00000477836 PDS5AQ29RF7 1337 aaKnown RBP11.97□□□□□ -0.49
SMARCB1-206ENST00000477836 SPDYE16A6NNV3 312 aaPredicted RBP11.97□□□□□ -0.49
SMARCB1-206ENST00000477836 PRR33A8MZF0 331 aa11.97□□□□□ -0.49
SMARCB1-206ENST00000477836 ZBTB22O15209 634 aa11.97□□□□□ -0.49
SMARCB1-206ENST00000477836 GH2P01242 217 aa11.97□□□□□ -0.49
SMARCB1-206ENST00000477836 VCAM1P19320 739 aa11.97□□□□□ -0.49
SMARCB1-206ENST00000477836 ACLYP53396 1101 aa11.97□□□□□ -0.49
SMARCB1-206ENST00000477836 RABGGTBP53611 331 aa11.97□□□□□ -0.49
SMARCB1-206ENST00000477836 FOXP4Q8IVH2 680 aaPredicted RBP11.97□□□□□ -0.49
SMARCB1-206ENST00000477836 NUP133Q8WUM0 1156 aa11.97□□□□□ -0.49
SMARCB1-206ENST00000477836 MAML3Q96JK9 1138 aa11.97□□□□□ -0.49
SMARCB1-206ENST00000477836 PPP1R12CQ9BZL4 782 aa11.97□□□□□ -0.49
SMARCB1-206ENST00000477836 ZNF521Q96K83 1311 aa11.96□□□□□ -0.49
SMARCB1-206ENST00000477836 RFXAPO00287 272 aa11.96□□□□□ -0.49
SMARCB1-206ENST00000477836 GTPBP6O43824 516 aaPredicted RBP11.96□□□□□ -0.49
SMARCB1-206ENST00000477836 MYOGP15173 224 aa11.96□□□□□ -0.49
SMARCB1-206ENST00000477836 ERCC3P19447 782 aa11.96□□□□□ -0.49
SMARCB1-206ENST00000477836 USP14P54578 494 aa11.96□□□□□ -0.49
SMARCB1-206ENST00000477836 MAPKAPK5Q8IW41 473 aa11.96□□□□□ -0.49
SMARCB1-206ENST00000477836 LENG1Q96BZ8 264 aaPredicted RBP11.96□□□□□ -0.49
SMARCB1-206ENST00000477836 MTIF3Q9H2K0 278 aaKnown RBP11.96□□□□□ -0.49
SMARCB1-206ENST00000477836 RPAP3Q9H6T3 665 aaPredicted RBP11.96□□□□□ -0.49
SMARCB1-206ENST00000477836 RAI14Q9P0K7 980 aa11.96□□□□□ -0.49
SMARCB1-206ENST00000477836 MTCH2Q9Y6C9 303 aa11.96□□□□□ -0.49
SMARCB1-206ENST00000477836 CIAO1O76071 339 aa11.95□□□□□ -0.5
SMARCB1-206ENST00000477836 FGBP02675 491 aa11.95□□□□□ -0.5
SMARCB1-206ENST00000477836 TIMM10P62072 90 aa11.95□□□□□ -0.5
SMARCB1-206ENST00000477836 TBC1D9Q6ZT07 1266 aa11.95□□□□□ -0.5
SMARCB1-206ENST00000477836 METTL16Q86W50 562 aaKnown RBP11.95□□□□□ -0.5
SMARCB1-206ENST00000477836 TGFBRAP1Q8WUH2 860 aa11.95□□□□□ -0.5
SMARCB1-206ENST00000477836 HLA-CQ95604 372 aa11.95□□□□□ -0.5
SMARCB1-206ENST00000477836 NOL10Q9BSC4 688 aaKnown RBP11.95□□□□□ -0.5
SMARCB1-206ENST00000477836 TSEN34Q9BSV6 310 aaKnown RBP11.95□□□□□ -0.5
SMARCB1-206ENST00000477836 SPATC1LQ9H0A9 340 aa11.95□□□□□ -0.5
SMARCB1-206ENST00000477836 CD320Q9NPF0 282 aa11.95□□□□□ -0.5
SMARCB1-206ENST00000477836 IL23AQ9NPF7 189 aa11.95□□□□□ -0.5
SMARCB1-206ENST00000477836 PALD1Q9ULE6 856 aa11.95□□□□□ -0.5
SMARCB1-206ENST00000477836 SALL2Q9Y467 1007 aaPredicted RBP11.95□□□□□ -0.5
SMARCB1-206ENST00000477836 FLT1P17948 1338 aa11.94□□□□□ -0.5
SMARCB1-206ENST00000477836 MROH7Q68CQ1 1323 aa11.94□□□□□ -0.5
SMARCB1-206ENST00000477836 ADAMTS4O75173 837 aa11.94□□□□□ -0.5
SMARCB1-206ENST00000477836 TAL1P17542 331 aaPredicted RBP11.94□□□□□ -0.5
SMARCB1-206ENST00000477836 RAB3GAP1Q15042 981 aa11.94□□□□□ -0.5
SMARCB1-206ENST00000477836 OTOP2Q7RTS6 562 aa11.94□□□□□ -0.5
SMARCB1-206ENST00000477836 NCAPG2Q86XI2 1143 aa11.94□□□□□ -0.5
SMARCB1-206ENST00000477836 SHCBP1Q8NEM2 672 aa11.94□□□□□ -0.5
SMARCB1-206ENST00000477836 ACER1Q8TDN7 264 aa11.94□□□□□ -0.5
SMARCB1-206ENST00000477836 USP44Q9H0E7 712 aa11.94□□□□□ -0.5
SMARCB1-206ENST00000477836 AATFQ9NY61 560 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMARCB1-206ENST00000477836 SAP30BPQ9UHR5 308 aaKnown RBP11.94□□□□□ -0.5
SMARCB1-206ENST00000477836 NRBP1Q9UHY1 535 aa11.94□□□□□ -0.5
SMARCB1-206ENST00000477836 FBXO3Q9UK99 471 aa11.94□□□□□ -0.5
SMARCB1-206ENST00000477836 PRRC2BQ5JSZ5 2229 aaKnown RBP11.94□□□□□ -0.5
SMARCB1-206ENST00000477836 C5orf42Q9H799 3197 aa11.93□□□□□ -0.5
SMARCB1-206ENST00000477836 MOXD2PA6NHM9 499 aa11.93□□□□□ -0.5
SMARCB1-206ENST00000477836 AKR1A1P14550 325 aa11.93□□□□□ -0.5
SMARCB1-206ENST00000477836 POU3F3P20264 500 aaPredicted RBP11.93□□□□□ -0.5
SMARCB1-206ENST00000477836 CYP2C18P33260 490 aa11.93□□□□□ -0.5
SMARCB1-206ENST00000477836 IL15P40933 162 aaPredicted RBP11.93□□□□□ -0.5
SMARCB1-206ENST00000477836 PLS1Q14651 629 aa11.93□□□□□ -0.5
SMARCB1-206ENST00000477836 KCNA10Q16322 511 aa11.93□□□□□ -0.5
SMARCB1-206ENST00000477836 CSPP1Q1MSJ5 1256 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms