RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 ZSCAN26Q16670 478 aa11.03□□□□□ -0.64
CMC1-209ENST00000477739 PROCA1Q8NCQ7 364 aaPredicted RBP11.03□□□□□ -0.64
CMC1-209ENST00000477739 AK7Q96M32 723 aa11.03□□□□□ -0.64
CMC1-209ENST00000477739 CHP1Q99653 195 aa11.03□□□□□ -0.64
CMC1-209ENST00000477739 RNF41Q9H4P4 317 aaPredicted RBP11.03□□□□□ -0.64
CMC1-209ENST00000477739 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.03□□□□□ -0.643e-6■■■■■ 56.3
CMC1-209ENST00000477739 DACH1Q9UI36 760 aa11.03□□□□□ -0.64
CMC1-209ENST00000477739 MORC2Q9Y6X9 1032 aaPredicted RBP11.03□□□□□ -0.64
CMC1-209ENST00000477739 MAGEB6P1A0A0J9YX57 407 aa11.03□□□□□ -0.64
CMC1-209ENST00000477739 FANCGO15287 622 aa11.03□□□□□ -0.64
CMC1-209ENST00000477739 UBA7P41226 1012 aa11.03□□□□□ -0.64
CMC1-209ENST00000477739 FXR1P51114 621 aaKnown RBP eCLIP11.03□□□□□ -0.64
CMC1-209ENST00000477739 GABPB1Q06547 395 aaPredicted RBP11.03□□□□□ -0.64
CMC1-209ENST00000477739 LETM2Q2VYF4 491 aa11.03□□□□□ -0.64
CMC1-209ENST00000477739 TDRD12Q587J7 1177 aaKnown RBP11.03□□□□□ -0.64
CMC1-209ENST00000477739 CCDC122Q5T0U0 273 aa11.03□□□□□ -0.64
CMC1-209ENST00000477739 SLC51AQ86UW1 340 aa11.03□□□□□ -0.64
CMC1-209ENST00000477739 SMCR8Q8TEV9 937 aaPredicted RBP11.03□□□□□ -0.64
CMC1-209ENST00000477739 INTS13Q9NVM9 706 aa11.03□□□□□ -0.64
CMC1-209ENST00000477739 CALCOCO1Q9P1Z2 691 aa11.03□□□□□ -0.64
CMC1-209ENST00000477739 PARP3Q9Y6F1 533 aa11.03□□□□□ -0.64
CMC1-209ENST00000477739 CTAGE15A4D2H0 777 aa11.02□□□□□ -0.64
CMC1-209ENST00000477739 CTAGE8P0CG41 777 aa11.02□□□□□ -0.64
CMC1-209ENST00000477739 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.64
CMC1-209ENST00000477739 PPARAQ07869 468 aa11.02□□□□□ -0.64
CMC1-209ENST00000477739 CUL4BQ13620 913 aa11.02□□□□□ -0.64
CMC1-209ENST00000477739 CCDC96Q2M329 555 aa11.02□□□□□ -0.64
CMC1-209ENST00000477739 PARP10Q53GL7 1025 aa11.02□□□□□ -0.64
CMC1-209ENST00000477739 SPTY2D1Q68D10 685 aaPredicted RBP11.02□□□□□ -0.64
CMC1-209ENST00000477739 CTAGE6Q86UF2 777 aa11.02□□□□□ -0.64
CMC1-209ENST00000477739 CTAGE4Q8IX94 777 aa11.02□□□□□ -0.64
CMC1-209ENST00000477739 MARCH10Q8NA82 808 aaPredicted RBP11.02□□□□□ -0.64
CMC1-209ENST00000477739 NBPF3Q9H094 633 aa11.02□□□□□ -0.64
CMC1-209ENST00000477739 MMRN2Q9H8L6 949 aa11.02□□□□□ -0.64
CMC1-209ENST00000477739 FAM207AQ9NSI2 230 aaPredicted RBP11.02□□□□□ -0.64
CMC1-209ENST00000477739 FHOD1Q9Y613 1164 aa11.02□□□□□ -0.64
CMC1-209ENST00000477739 SALL1Q9NSC2 1324 aa11.02□□□□□ -0.64
CMC1-209ENST00000477739 CCDC196A0A1B0GTZ2 297 aa11.02□□□□□ -0.65
CMC1-209ENST00000477739 CCDC194A0A1B0GVG4 234 aa11.02□□□□□ -0.65
CMC1-209ENST00000477739 ESR2Q92731 530 aa11.02□□□□□ -0.65
CMC1-209ENST00000477739 DYNLL2Q96FJ2 89 aa11.02□□□□□ -0.65
CMC1-209ENST00000477739 OSBPL5Q9H0X9 879 aaPredicted RBP11.02□□□□□ -0.65
CMC1-209ENST00000477739 ABCB6Q9NP58 842 aa11.02□□□□□ -0.65
CMC1-209ENST00000477739 KRT2P35908 639 aa11.02□□□□□ -0.65
CMC1-209ENST00000477739 TOB1P50616 345 aaPredicted RBP11.02□□□□□ -0.65
CMC1-209ENST00000477739 IRX5P78411 483 aaPredicted RBP11.02□□□□□ -0.65
CMC1-209ENST00000477739 SLC7A5Q01650 507 aa11.02□□□□□ -0.65
CMC1-209ENST00000477739 ZNF34Q8IZ26 560 aa11.02□□□□□ -0.65
CMC1-209ENST00000477739 SLC44A5Q8NCS7 719 aa11.02□□□□□ -0.65
CMC1-209ENST00000477739 ZNF219Q9P2Y4 722 aaPredicted RBP11.02□□□□□ -0.65
CMC1-209ENST00000477739 TTC38Q5R3I4 469 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 REXO1L1PQ8IX06 675 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 NELFBQ8WX92 580 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 CRACR2AQ9BSW2 395 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 PLEKHG2Q9H7P9 1386 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 SIPA1L3O60292 1781 aaPredicted RBP11.01□□□□□ -0.65
CMC1-209ENST00000477739 ARFGEF2Q9Y6D5 1785 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 A0A087X0B3 334 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 ZEB2O60315 1214 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 TADA3O75528 432 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 MMP1P03956 469 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 GNAT2P19087 354 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 ARID4AP29374 1257 aaPredicted RBP11.01□□□□□ -0.65
CMC1-209ENST00000477739 TXLNAP40222 546 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 KLK7P49862 253 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 CACNB1Q02641 598 aaPredicted RBP11.01□□□□□ -0.65
CMC1-209ENST00000477739 INF2Q27J81 1249 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 KLHL34Q8N239 644 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 TC2NQ8N9U0 490 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 GJA10Q969M2 543 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 UBA5Q9GZZ9 404 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 ANKIB1Q9P2G1 1089 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 UTRNP46939 3433 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 LMTK3Q96Q04 1460 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 KCPQ6ZWJ8 1503 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 ZNF185O15231 689 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 KCNQ2O43526 872 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 ASIC1P78348 528 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 CC2D1AQ6P1N0 951 aaPredicted RBP11.01□□□□□ -0.65
CMC1-209ENST00000477739 FOXR1Q6PIV2 292 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 VGLL2Q8N8G2 317 aa11.01□□□□□ -0.65
CMC1-209ENST00000477739 NOA1Q8NC60 698 aaKnown RBP11.01□□□□□ -0.65
CMC1-209ENST00000477739 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.01□□□□□ -0.65
CMC1-209ENST00000477739 GSG1L2A8MUP6 293 aa11□□□□□ -0.65
CMC1-209ENST00000477739 RILPL1Q5EBL4 403 aa11□□□□□ -0.65
CMC1-209ENST00000477739 CCDC181Q5TID7 509 aa11□□□□□ -0.65
CMC1-209ENST00000477739 RESP18Q5W5W9 173 aa11□□□□□ -0.65
CMC1-209ENST00000477739 KCTD16Q68DU8 428 aa11□□□□□ -0.65
CMC1-209ENST00000477739 DZIP1Q86YF9 867 aaKnown RBP11□□□□□ -0.65
CMC1-209ENST00000477739 RIC1Q4ADV7 1423 aa11□□□□□ -0.65
CMC1-209ENST00000477739 CRYBG1Q9Y4K1 1723 aa11□□□□□ -0.65
CMC1-209ENST00000477739 PSDA5PKW4 1024 aaPredicted RBP11□□□□□ -0.65
CMC1-209ENST00000477739 B4DLN1 442 aa11□□□□□ -0.65
CMC1-209ENST00000477739 LLGL1Q15334 1064 aa11□□□□□ -0.65
CMC1-209ENST00000477739 CTR9Q6PD62 1173 aa11□□□□□ -0.65
CMC1-209ENST00000477739 KRT26Q7Z3Y9 468 aa11□□□□□ -0.65
CMC1-209ENST00000477739 DNAAF5Q86Y56 855 aa11□□□□□ -0.65
CMC1-209ENST00000477739 IGDCC4Q8TDY8 1250 aa11□□□□□ -0.65
CMC1-209ENST00000477739 IFT81Q8WYA0 676 aa11□□□□□ -0.65
CMC1-209ENST00000477739 NLRC4Q9NPP4 1024 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms