RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 ERO1AQ96HE7 468 aa11.62□□□□□ -0.55
NIFK-205ENST00000477693 FEZ1Q99689 392 aa11.62□□□□□ -0.55
NIFK-205ENST00000477693 ESYT1Q9BSJ8 1104 aa11.62□□□□□ -0.55
NIFK-205ENST00000477693 MKNK2Q9HBH9 465 aa11.62□□□□□ -0.55
NIFK-205ENST00000477693 TNRC18O15417 2968 aaPredicted RBP11.62□□□□□ -0.55
NIFK-205ENST00000477693 GREB1LQ9C091 1923 aaPredicted RBP11.62□□□□□ -0.55
NIFK-205ENST00000477693 MYH8P13535 1937 aa11.61□□□□□ -0.55
NIFK-205ENST00000477693 A0A1W2PRG0 241 aa11.61□□□□□ -0.55
NIFK-205ENST00000477693 SGSM2O43147 1006 aa11.61□□□□□ -0.55
NIFK-205ENST00000477693 ATMINO43313 823 aaPredicted RBP11.61□□□□□ -0.55
NIFK-205ENST00000477693 BCRP11274 1271 aa11.61□□□□□ -0.55
NIFK-205ENST00000477693 PDE4BQ07343 736 aa11.61□□□□□ -0.55
NIFK-205ENST00000477693 PKN2Q16513 984 aaKnown RBP11.61□□□□□ -0.55
NIFK-205ENST00000477693 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.61□□□□□ -0.55
NIFK-205ENST00000477693 KANSL2Q9H9L4 492 aa11.61□□□□□ -0.55
NIFK-205ENST00000477693 ARHGEF10LQ9HCE6 1279 aa11.61□□□□□ -0.55
NIFK-205ENST00000477693 PLIN4Q96Q06 1357 aa11.61□□□□□ -0.55
NIFK-205ENST00000477693 FGRP09769 529 aa11.6□□□□□ -0.55
NIFK-205ENST00000477693 CHRM1P11229 460 aaPredicted RBP11.6□□□□□ -0.55
NIFK-205ENST00000477693 OSBPP22059 807 aa11.6□□□□□ -0.55
NIFK-205ENST00000477693 LACTBP83111 547 aaPredicted RBP11.6□□□□□ -0.55
NIFK-205ENST00000477693 ZYXQ15942 572 aaKnown RBP11.6□□□□□ -0.55
NIFK-205ENST00000477693 OTOP1Q7RTM1 612 aa11.6□□□□□ -0.55
NIFK-205ENST00000477693 SIAH1Q8IUQ4 282 aa11.6□□□□□ -0.55
NIFK-205ENST00000477693 STK11IPQ8N1F8 1099 aa11.6□□□□□ -0.55
NIFK-205ENST00000477693 CD99L2Q8TCZ2 262 aa11.6□□□□□ -0.55
NIFK-205ENST00000477693 SMCR8Q8TEV9 937 aaPredicted RBP11.6□□□□□ -0.55
NIFK-205ENST00000477693 DSCC1Q9BVC3 393 aa11.6□□□□□ -0.55
NIFK-205ENST00000477693 ASCC2Q9H1I8 757 aaPredicted RBP11.6□□□□□ -0.55
NIFK-205ENST00000477693 IL25Q9H293 177 aa11.6□□□□□ -0.55
NIFK-205ENST00000477693 SH2D4AQ9H788 454 aa11.6□□□□□ -0.55
NIFK-205ENST00000477693 CPA4Q9UI42 421 aa11.6□□□□□ -0.55
NIFK-205ENST00000477693 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.6□□□□□ -0.55
NIFK-205ENST00000477693 TMX2Q9Y320 296 aa11.6□□□□□ -0.55
NIFK-205ENST00000477693 IGKV6D-41A0A0C4DH26 115 aa11.59□□□□□ -0.55
NIFK-205ENST00000477693 PRDM1O75626 825 aa11.59□□□□□ -0.55
NIFK-205ENST00000477693 EEF2P13639 858 aaKnown RBP11.59□□□□□ -0.55
NIFK-205ENST00000477693 VCAM1P19320 739 aa11.59□□□□□ -0.55
NIFK-205ENST00000477693 MCCP23508 829 aa11.59□□□□□ -0.55
NIFK-205ENST00000477693 GCLCP48506 637 aaPredicted RBP11.59□□□□□ -0.55
NIFK-205ENST00000477693 IRX3P78415 501 aaPredicted RBP11.59□□□□□ -0.55
NIFK-205ENST00000477693 CAP1Q01518 475 aa11.59□□□□□ -0.55
NIFK-205ENST00000477693 CTDSPL2Q05D32 466 aa11.59□□□□□ -0.55
NIFK-205ENST00000477693 GSE1Q14687 1217 aa11.59□□□□□ -0.55
NIFK-205ENST00000477693 ARHGEF6Q15052 776 aa11.59□□□□□ -0.55
NIFK-205ENST00000477693 FAM110CQ1W6H9 321 aa11.59□□□□□ -0.55
NIFK-205ENST00000477693 CLEC10AQ8IUN9 316 aa11.59□□□□□ -0.55
NIFK-205ENST00000477693 ZNF444Q8N0Y2 327 aaPredicted RBP11.59□□□□□ -0.55
NIFK-205ENST00000477693 GTF3C2Q8WUA4 911 aaPredicted RBP11.59□□□□□ -0.55
NIFK-205ENST00000477693 LPAR1Q92633 364 aa11.59□□□□□ -0.55
NIFK-205ENST00000477693 VCPKMTQ9H867 229 aa11.59□□□□□ -0.55
NIFK-205ENST00000477693 NYAP2Q9P242 653 aa11.59□□□□□ -0.55
NIFK-205ENST00000477693 USP17L15C9J2P7 530 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 USP17L13C9JLJ4 530 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 USP17L11C9JVI0 530 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 USP17L18D6R9N7 530 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 USP17L22D6RA61 530 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 USP17L17D6RBQ6 530 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 USP17L19D6RCP7 530 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 USP17L20D6RJB6 530 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 ORC4O43929 436 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 GNRH1P01148 92 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 PCP11498 1178 aaKnown RBP11.58□□□□□ -0.56
NIFK-205ENST00000477693 RBM25P49756 843 aaKnown RBP11.58□□□□□ -0.56
NIFK-205ENST00000477693 USP17L24Q0WX57 530 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 KIF22Q14807 665 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 PRPF38BQ5VTL8 546 aaKnown RBP11.58□□□□□ -0.56
NIFK-205ENST00000477693 FBXO46Q6PJ61 603 aaPredicted RBP11.58□□□□□ -0.56
NIFK-205ENST00000477693 CATSPERGQ6ZRH7 1159 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 NEDD1Q8NHV4 660 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 USP26Q9BXU7 913 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 EFCC1Q9HA90 598 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 SYNPO2Q9UMS6 1093 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 TRIM17Q9Y577 477 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 TACC3Q9Y6A5 838 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 HTTP42858 3142 aa11.58□□□□□ -0.56
NIFK-205ENST00000477693 TSPY3P0CV98 308 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 TSPY8P0CW00 308 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 PYGBP11216 843 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 ANAPC15P60006 121 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 HERVK_113P62684 666 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 TFAP4Q01664 338 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 KIAA1755Q5JYT7 1200 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 RNF20Q5VTR2 975 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 LBX2Q6XYB7 198 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 ANKRD13CQ8N6S4 541 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 STAG1Q8WVM7 1258 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 MKL1Q969V6 931 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 CEP95Q96GE4 821 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 TBC1D32Q96NH3 1257 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 P2RX7Q99572 595 aaKnown RBP11.57□□□□□ -0.56
NIFK-205ENST00000477693 C22orf23Q9BZE7 217 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 ARHGAP39Q9C0H5 1083 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 NBPF3Q9H094 633 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 RPAP3Q9H6T3 665 aaPredicted RBP11.57□□□□□ -0.56
NIFK-205ENST00000477693 GOPCQ9HD26 462 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 BMP2KQ9NSY1 1161 aaPredicted RBP11.57□□□□□ -0.56
NIFK-205ENST00000477693 MTMR4Q9NYA4 1195 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 CTNNA3Q9UI47 895 aa11.57□□□□□ -0.56
NIFK-205ENST00000477693 PCDHB13Q9Y5F0 798 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms