RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 EHD4Q9H223 541 aa13.91□□□□□ -0.18
BRCA1-213ENST00000476777 RPAP3Q9H6T3 665 aaPredicted RBP13.91□□□□□ -0.18
BRCA1-213ENST00000476777 GPR108Q9NPR9 543 aa13.91□□□□□ -0.18
BRCA1-213ENST00000476777 FPGT-TNNI3KV9GXZ4 949 aa13.91□□□□□ -0.18
BRCA1-213ENST00000476777 STRNO43815 780 aa13.9□□□□□ -0.18
BRCA1-213ENST00000476777 COBLO75128 1261 aa13.9□□□□□ -0.18
BRCA1-213ENST00000476777 GNAI2P04899 355 aa13.9□□□□□ -0.18
BRCA1-213ENST00000476777 CYP7A1P22680 504 aa13.9□□□□□ -0.18
BRCA1-213ENST00000476777 GUCY1A2P33402 732 aa13.9□□□□□ -0.18
BRCA1-213ENST00000476777 ADCYAP1R1P41586 468 aa13.9□□□□□ -0.18
BRCA1-213ENST00000476777 ZAP70P43403 619 aa13.9□□□□□ -0.18
BRCA1-213ENST00000476777 RARSP54136 660 aaKnown RBP13.9□□□□□ -0.18
BRCA1-213ENST00000476777 LRRC41Q15345 812 aa13.9□□□□□ -0.18
BRCA1-213ENST00000476777 ABCB5Q2M3G0 1257 aa13.9□□□□□ -0.18
BRCA1-213ENST00000476777 CERKLQ49MI3 558 aaPredicted RBP13.9□□□□□ -0.18
BRCA1-213ENST00000476777 SYMPKQ92797 1274 aaKnown RBP13.9□□□□□ -0.18
BRCA1-213ENST00000476777 ZNF512BQ96KM6 892 aaPredicted RBP13.9□□□□□ -0.18
BRCA1-213ENST00000476777 CHD7Q9P2D1 2997 aa13.89□□□□□ -0.19
BRCA1-213ENST00000476777 TMEM265A0A087WTH1 108 aa13.89□□□□□ -0.19
BRCA1-213ENST00000476777 ITGB8P26012 769 aa13.89□□□□□ -0.19
BRCA1-213ENST00000476777 SHMT1P34896 483 aa13.89□□□□□ -0.19
BRCA1-213ENST00000476777 USP5P45974 858 aa13.89□□□□□ -0.19
BRCA1-213ENST00000476777 TLE2Q04725 743 aa13.89□□□□□ -0.19
BRCA1-213ENST00000476777 PRAMEF19Q5SWL8 479 aa13.89□□□□□ -0.19
BRCA1-213ENST00000476777 MIGA1Q8NAN2 632 aa13.89□□□□□ -0.19
BRCA1-213ENST00000476777 FERMT2Q96AC1 680 aa13.89□□□□□ -0.19
BRCA1-213ENST00000476777 ZNF236Q9UL36 1845 aa13.89□□□□□ -0.19
BRCA1-213ENST00000476777 ERCC3P19447 782 aa13.88□□□□□ -0.19
BRCA1-213ENST00000476777 EPHB4P54760 987 aa13.88□□□□□ -0.19
BRCA1-213ENST00000476777 POLA2Q14181 598 aa13.88□□□□□ -0.19
BRCA1-213ENST00000476777 COG2Q14746 738 aa13.88□□□□□ -0.19
BRCA1-213ENST00000476777 FAM47AQ5JRC9 791 aa13.88□□□□□ -0.19
BRCA1-213ENST00000476777 TTC6Q86TZ1 520 aa13.88□□□□□ -0.19
BRCA1-213ENST00000476777 CERS3Q8IU89 383 aa13.88□□□□□ -0.19
BRCA1-213ENST00000476777 SHCBP1Q8NEM2 672 aa13.88□□□□□ -0.19
BRCA1-213ENST00000476777 RNPC3Q96LT9 517 aaKnown RBP13.88□□□□□ -0.19
BRCA1-213ENST00000476777 SPATC1LQ9H0A9 340 aa13.88□□□□□ -0.19
BRCA1-213ENST00000476777 CABP5Q9NP86 173 aa13.88□□□□□ -0.19
BRCA1-213ENST00000476777 HOXC10Q9NYD6 342 aa13.88□□□□□ -0.19
BRCA1-213ENST00000476777 A0A1W2PRG0 241 aa13.87□□□□□ -0.19
BRCA1-213ENST00000476777 PLCD1P51178 756 aa13.87□□□□□ -0.19
BRCA1-213ENST00000476777 GRIN2CQ14957 1233 aa13.87□□□□□ -0.19
BRCA1-213ENST00000476777 USP38Q8NB14 1042 aa13.87□□□□□ -0.19
BRCA1-213ENST00000476777 SLC5A4Q9NY91 659 aa13.87□□□□□ -0.19
BRCA1-213ENST00000476777 PHF24Q9UPV7 400 aa13.87□□□□□ -0.19
BRCA1-213ENST00000476777 TACC3Q9Y6A5 838 aa13.87□□□□□ -0.19
BRCA1-213ENST00000476777 IDH1O75874 414 aaKnown RBP13.86□□□□□ -0.19
BRCA1-213ENST00000476777 CLTBP09497 229 aa13.86□□□□□ -0.19
BRCA1-213ENST00000476777 TRIM27P14373 513 aa13.86□□□□□ -0.19
BRCA1-213ENST00000476777 SEPT2Q15019 361 aa13.86□□□□□ -0.19
BRCA1-213ENST00000476777 TJAP1Q5JTD0 557 aa13.86□□□□□ -0.19
BRCA1-213ENST00000476777 ABRAQ8N0Z2 381 aa13.86□□□□□ -0.19
BRCA1-213ENST00000476777 MAGEB6Q8N7X4 407 aa13.86□□□□□ -0.19
BRCA1-213ENST00000476777 DBNLQ9UJU6 430 aaKnown RBP13.86□□□□□ -0.19
BRCA1-213ENST00000476777 TNNQ9UQP3 1299 aa13.86□□□□□ -0.19
BRCA1-213ENST00000476777 ZNFX1Q9P2E3 1918 aaKnown RBP13.86□□□□□ -0.19
BRCA1-213ENST00000476777 KIAA0355O15063 1070 aa13.85□□□□□ -0.19
BRCA1-213ENST00000476777 COL9A1P20849 921 aa13.85□□□□□ -0.19
BRCA1-213ENST00000476777 GABPAQ06546 454 aa13.85□□□□□ -0.19
BRCA1-213ENST00000476777 KIAA1755Q5JYT7 1200 aa13.85□□□□□ -0.19
BRCA1-213ENST00000476777 MB21D1Q8N884 522 aa13.85□□□□□ -0.19
BRCA1-213ENST00000476777 MAML3Q96JK9 1138 aa13.85□□□□□ -0.19
BRCA1-213ENST00000476777 TANGO6Q9C0B7 1094 aa13.85□□□□□ -0.19
BRCA1-213ENST00000476777 MROH8Q9H579 483 aa13.85□□□□□ -0.19
BRCA1-213ENST00000476777 TLR7Q9NYK1 1049 aaKnown RBP13.85□□□□□ -0.19
BRCA1-213ENST00000476777 A0A0G2JMZ2 1700 aa13.84□□□□□ -0.19
BRCA1-213ENST00000476777 TNFRSF10AO00220 468 aa13.84□□□□□ -0.19
BRCA1-213ENST00000476777 DNAJB2P25686 324 aa13.84□□□□□ -0.19
BRCA1-213ENST00000476777 OS9Q13438 667 aaPredicted RBP13.84□□□□□ -0.19
BRCA1-213ENST00000476777 NCAPG2Q86XI2 1143 aa13.84□□□□□ -0.19
BRCA1-213ENST00000476777 SSH3Q8TE77 659 aa13.84□□□□□ -0.19
BRCA1-213ENST00000476777 XPNPEP3Q9NQH7 507 aa13.84□□□□□ -0.19
BRCA1-213ENST00000476777 NRBP1Q9UHY1 535 aa13.84□□□□□ -0.19
BRCA1-213ENST00000476777 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.83□□□□□ -0.2
BRCA1-213ENST00000476777 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.83□□□□□ -0.2
BRCA1-213ENST00000476777 IPO8O15397 1037 aaKnown RBP13.83□□□□□ -0.2
BRCA1-213ENST00000476777 PQBP1O60828 265 aaKnown RBP13.83□□□□□ -0.2
BRCA1-213ENST00000476777 SURF6O75683 361 aaKnown RBP13.83□□□□□ -0.2
BRCA1-213ENST00000476777 PGK1P00558 417 aa13.83□□□□□ -0.2
BRCA1-213ENST00000476777 RARBP10826 455 aa13.83□□□□□ -0.2
BRCA1-213ENST00000476777 RAG1P15918 1043 aa13.83□□□□□ -0.2
BRCA1-213ENST00000476777 EVX2Q03828 476 aa13.83□□□□□ -0.2
BRCA1-213ENST00000476777 FPGSQ05932 587 aa13.83□□□□□ -0.2
BRCA1-213ENST00000476777 PLS1Q14651 629 aa13.83□□□□□ -0.2
BRCA1-213ENST00000476777 TMED8Q6PL24 325 aaPredicted RBP13.83□□□□□ -0.2
BRCA1-213ENST00000476777 RIOK1Q9BRS2 568 aaKnown RBP13.83□□□□□ -0.2
BRCA1-213ENST00000476777 CCDC8Q9H0W5 538 aaPredicted RBP13.83□□□□□ -0.2
BRCA1-213ENST00000476777 ZNF576Q9H609 170 aa13.83□□□□□ -0.2
BRCA1-213ENST00000476777 ANTXR1Q9H6X2 564 aa13.83□□□□□ -0.2
BRCA1-213ENST00000476777 PIEZO1Q92508 2521 aa13.83□□□□□ -0.2
BRCA1-213ENST00000476777 REV3LO60673 3130 aa13.82□□□□□ -0.2
BRCA1-213ENST00000476777 A0A1W2PQ45 241 aaPredicted RBP13.82□□□□□ -0.2
BRCA1-213ENST00000476777 A0A1W2PQY0 241 aa13.82□□□□□ -0.2
BRCA1-213ENST00000476777 ZNF316A6NFI3 1004 aaPredicted RBP13.82□□□□□ -0.2
BRCA1-213ENST00000476777 MPHOSPH10O00566 681 aaKnown RBP13.82□□□□□ -0.2
BRCA1-213ENST00000476777 POLR3DP05423 398 aaPredicted RBP13.82□□□□□ -0.2
BRCA1-213ENST00000476777 FCER1AP12319 257 aa13.82□□□□□ -0.2
BRCA1-213ENST00000476777 TAL1P17542 331 aaPredicted RBP13.82□□□□□ -0.2
BRCA1-213ENST00000476777 ATP8B2P98198 1209 aa13.82□□□□□ -0.2
BRCA1-213ENST00000476777 MAP3K12Q12852 859 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms