RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 COG2Q14746 738 aa16.44■□□□□ 0.22
TMCO1-205ENST00000476143 CHD1LQ86WJ1 897 aa16.44■□□□□ 0.22
TMCO1-205ENST00000476143 SMC5Q8IY18 1101 aa16.44■□□□□ 0.22
TMCO1-205ENST00000476143 IFNL3Q8IZI9 196 aa16.44■□□□□ 0.22
TMCO1-205ENST00000476143 STK11IPQ8N1F8 1099 aa16.44■□□□□ 0.22
TMCO1-205ENST00000476143 VCPKMTQ9H867 229 aa16.44■□□□□ 0.22
TMCO1-205ENST00000476143 RBPJLQ9UBG7 517 aa16.44■□□□□ 0.22
TMCO1-205ENST00000476143 SALL3Q9BXA9 1300 aa16.44■□□□□ 0.22
TMCO1-205ENST00000476143 WDR46O15213 610 aaKnown RBP16.43■□□□□ 0.22
TMCO1-205ENST00000476143 FLOT1O75955 427 aa16.43■□□□□ 0.22
TMCO1-205ENST00000476143 GJB1P08034 283 aa16.43■□□□□ 0.22
TMCO1-205ENST00000476143 ELNP15502 786 aa16.43■□□□□ 0.22
TMCO1-205ENST00000476143 RGS2P41220 211 aa16.43■□□□□ 0.22
TMCO1-205ENST00000476143 MTFR1Q15390 333 aa16.43■□□□□ 0.22
TMCO1-205ENST00000476143 PPP4R3BQ5MIZ7 849 aa16.43■□□□□ 0.22
TMCO1-205ENST00000476143 LBX2Q6XYB7 198 aa16.43■□□□□ 0.22
TMCO1-205ENST00000476143 PLEKHH3Q7Z736 793 aa16.43■□□□□ 0.22
TMCO1-205ENST00000476143 MB21D1Q8N884 522 aa16.43■□□□□ 0.22
TMCO1-205ENST00000476143 TXNRD2Q9NNW7 524 aa16.43■□□□□ 0.22
TMCO1-205ENST00000476143 HELLSQ9NRZ9 838 aa16.43■□□□□ 0.22
TMCO1-205ENST00000476143 DOCK3Q8IZD9 2030 aa16.43■□□□□ 0.22
TMCO1-205ENST00000476143 A0A1W2PRG0 241 aa16.42■□□□□ 0.22
TMCO1-205ENST00000476143 SPDYE16A6NNV3 312 aaPredicted RBP16.42■□□□□ 0.22
TMCO1-205ENST00000476143 EEF2P13639 858 aaKnown RBP16.42■□□□□ 0.22
TMCO1-205ENST00000476143 MFAP1P55081 439 aaKnown RBP16.42■□□□□ 0.22
TMCO1-205ENST00000476143 GPR142Q7Z601 462 aa16.42■□□□□ 0.22
TMCO1-205ENST00000476143 RILPL2Q969X0 211 aa16.42■□□□□ 0.22
TMCO1-205ENST00000476143 PDE4DIPQ5VU43 2346 aa16.41■□□□□ 0.22
TMCO1-205ENST00000476143 TSPY3P0CV98 308 aa16.41■□□□□ 0.22
TMCO1-205ENST00000476143 TSPY8P0CW00 308 aa16.41■□□□□ 0.22
TMCO1-205ENST00000476143 ZKSCAN1P17029 563 aaPredicted RBP16.41■□□□□ 0.22
TMCO1-205ENST00000476143 CYP2B6P20813 491 aa16.41■□□□□ 0.22
TMCO1-205ENST00000476143 RASA1P20936 1047 aa16.41■□□□□ 0.22
TMCO1-205ENST00000476143 GJA8P48165 433 aa16.41■□□□□ 0.22
TMCO1-205ENST00000476143 PPARAQ07869 468 aa16.41■□□□□ 0.22
TMCO1-205ENST00000476143 PRPF38BQ5VTL8 546 aaKnown RBP16.41■□□□□ 0.22
TMCO1-205ENST00000476143 SAMD1Q6SPF0 538 aaPredicted RBP16.41■□□□□ 0.22
TMCO1-205ENST00000476143 SPICE1Q8N0Z3 855 aa16.41■□□□□ 0.22
TMCO1-205ENST00000476143 SEC62Q99442 399 aaKnown RBP16.41■□□□□ 0.22
TMCO1-205ENST00000476143 EPB41L4AQ9HCS5 686 aaPredicted RBP16.41■□□□□ 0.22
TMCO1-205ENST00000476143 XRCC5P13010 732 aaKnown RBP16.4■□□□□ 0.22
TMCO1-205ENST00000476143 NUCB1Q02818 461 aa16.4■□□□□ 0.22
TMCO1-205ENST00000476143 PLS1Q14651 629 aa16.4■□□□□ 0.22
TMCO1-205ENST00000476143 Q3C1V9 767 aa16.4■□□□□ 0.22
TMCO1-205ENST00000476143 CLEC10AQ8IUN9 316 aa16.4■□□□□ 0.22
TMCO1-205ENST00000476143 U2AF1L4Q8WU68 220 aaKnown RBP16.4■□□□□ 0.22
TMCO1-205ENST00000476143 APBA2Q99767 749 aa16.4■□□□□ 0.22
TMCO1-205ENST00000476143 UNC93B1Q9H1C4 597 aa16.4■□□□□ 0.22
TMCO1-205ENST00000476143 PORCNQ9H237 461 aa16.4■□□□□ 0.22
TMCO1-205ENST00000476143 CTDP1Q9Y5B0 961 aaPredicted RBP16.4■□□□□ 0.22
TMCO1-205ENST00000476143 DSG3P32926 999 aa16.39■□□□□ 0.21
TMCO1-205ENST00000476143 MCMDC2Q4G0Z9 681 aa16.39■□□□□ 0.21
TMCO1-205ENST00000476143 HMX1Q9NP08 348 aaPredicted RBP16.39■□□□□ 0.21
TMCO1-205ENST00000476143 SLC5A4Q9NY91 659 aa16.39■□□□□ 0.21
TMCO1-205ENST00000476143 NYAP2Q9P242 653 aa16.39■□□□□ 0.21
TMCO1-205ENST00000476143 GJD2Q9UKL4 321 aa16.39■□□□□ 0.21
TMCO1-205ENST00000476143 SLC15A5A6NIM6 579 aa16.38■□□□□ 0.21
TMCO1-205ENST00000476143 SMIM22K7EJ46 135 aa16.38■□□□□ 0.21
TMCO1-205ENST00000476143 HIP1O00291 1037 aa16.38■□□□□ 0.21
TMCO1-205ENST00000476143 PRDM1O75626 825 aa16.38■□□□□ 0.21
TMCO1-205ENST00000476143 SGPL1O95470 568 aa16.38■□□□□ 0.21
TMCO1-205ENST00000476143 IGHDP01880 384 aa16.38■□□□□ 0.21
TMCO1-205ENST00000476143 TFRCP02786 760 aaKnown RBP16.38■□□□□ 0.21
TMCO1-205ENST00000476143 SHCBP1Q8NEM2 672 aa16.38■□□□□ 0.21
TMCO1-205ENST00000476143 DEFB118Q96PH6 123 aa16.38■□□□□ 0.21
TMCO1-205ENST00000476143 HTATIP2Q9BUP3 242 aa16.38■□□□□ 0.21
TMCO1-205ENST00000476143 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.38■□□□□ 0.21
TMCO1-205ENST00000476143 DIAPH3Q9NSV4 1193 aa16.38■□□□□ 0.21
TMCO1-205ENST00000476143 SYNPO2Q9UMS6 1093 aa16.38■□□□□ 0.21
TMCO1-205ENST00000476143 RPTORQ8N122 1335 aa16.38■□□□□ 0.21
TMCO1-205ENST00000476143 MYH4Q9Y623 1939 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 TSPY2A6NKD2 308 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 STRNO43815 780 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 PEX10O60683 326 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 CNMDO75829 334 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 TTLL1O95922 423 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 PTPREP23469 700 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 COPB2P35606 906 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 MAP2K5Q13163 448 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 CCDC129Q6ZRS4 1044 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 SIAH1Q8IUQ4 282 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 SPATC1LQ9H0A9 340 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 OSBPL3Q9H4L5 887 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 MROH8Q9H579 483 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 TOMM22Q9NS69 142 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 BTBD7Q9P203 1132 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 CLIP2Q9UDT6 1046 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 ISY1Q9ULR0 285 aaKnown RBP16.37■□□□□ 0.21
TMCO1-205ENST00000476143 HTTP42858 3142 aa16.37■□□□□ 0.21
TMCO1-205ENST00000476143 GREB1LQ9C091 1923 aaPredicted RBP16.37■□□□□ 0.21
TMCO1-205ENST00000476143 FARP2O94887 1054 aaPredicted RBP16.36■□□□□ 0.21
TMCO1-205ENST00000476143 SLC25A27O95847 323 aa16.36■□□□□ 0.21
TMCO1-205ENST00000476143 MORN1Q5T089 497 aa16.36■□□□□ 0.21
TMCO1-205ENST00000476143 FAM83BQ5T0W9 1011 aa16.36■□□□□ 0.21
TMCO1-205ENST00000476143 MFSD14CQ5VZR4 134 aa16.36■□□□□ 0.21
TMCO1-205ENST00000476143 DPP9Q86TI2 863 aa16.36■□□□□ 0.21
TMCO1-205ENST00000476143 NCAPG2Q86XI2 1143 aa16.36■□□□□ 0.21
TMCO1-205ENST00000476143 PLEKHM2Q8IWE5 1019 aa16.36■□□□□ 0.21
TMCO1-205ENST00000476143 TRIB2Q92519 343 aa16.36■□□□□ 0.21
TMCO1-205ENST00000476143 ATG4CQ96DT6 458 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms