RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	CCL14	Q16627	93 aa		9.08	□□□□□ -0.96
HDAC9-223	ENST00000476135	CCDC57	Q2TAC2	916 aa		9.08	□□□□□ -0.96
HDAC9-223	ENST00000476135	TRIM60	Q495X7	471 aa		9.08	□□□□□ -0.96
HDAC9-223	ENST00000476135	TAF7L	Q5H9L4	462 aa		9.08	□□□□□ -0.96
HDAC9-223	ENST00000476135	C1orf53	Q5VUE5	145 aa		9.08	□□□□□ -0.96
HDAC9-223	ENST00000476135	MFSD14C	Q5VZR4	134 aa		9.08	□□□□□ -0.96
HDAC9-223	ENST00000476135	SH3RF1	Q7Z6J0	888 aa		9.08	□□□□□ -0.96
HDAC9-223	ENST00000476135	HOMEZ	Q8IX15	550 aa		9.08	□□□□□ -0.96
HDAC9-223	ENST00000476135	ARRDC4	Q8NCT1	418 aa		9.08	□□□□□ -0.96
HDAC9-223	ENST00000476135	ZNF594	Q96JF6	807 aa	Predicted RBP	9.08	□□□□□ -0.96
HDAC9-223	ENST00000476135	TBC1D2	Q9BYX2	928 aa		9.08	□□□□□ -0.96
HDAC9-223	ENST00000476135	C11orf16	Q9NQ32	467 aa		9.08	□□□□□ -0.96
HDAC9-223	ENST00000476135	CHMP3	Q9Y3E7	222 aa		9.08	□□□□□ -0.96
HDAC9-223	ENST00000476135	CACNA1A	O00555	2505 aa		9.08	□□□□□ -0.96
HDAC9-223	ENST00000476135	PLXNA1	Q9UIW2	1896 aa		9.08	□□□□□ -0.96
HDAC9-223	ENST00000476135	MYO9B	Q13459	2157 aa		9.07	□□□□□ -0.96
HDAC9-223	ENST00000476135	UTY	O14607	1347 aa		9.07	□□□□□ -0.96
HDAC9-223	ENST00000476135	MYBBP1A	Q9BQG0	1328 aa	Known RBP	9.07	□□□□□ -0.96
HDAC9-223	ENST00000476135	ENTPD3	O75355	529 aa		9.07	□□□□□ -0.96
HDAC9-223	ENST00000476135	CAVIN4	Q5BKX8	364 aa		9.07	□□□□□ -0.96
HDAC9-223	ENST00000476135	ZFPM1	Q8IX07	1006 aa		9.07	□□□□□ -0.96
HDAC9-223	ENST00000476135	GPRC5A	Q8NFJ5	357 aa		9.07	□□□□□ -0.96
HDAC9-223	ENST00000476135	THAP11	Q96EK4	314 aa		9.07	□□□□□ -0.96
HDAC9-223	ENST00000476135	DAGLA	Q9Y4D2	1042 aa		9.07	□□□□□ -0.96
HDAC9-223	ENST00000476135	TACC3	Q9Y6A5	838 aa		9.07	□□□□□ -0.96
HDAC9-223	ENST00000476135	KBTBD13	C9JR72	458 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	SMIM22	K7EJ46	135 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	IGFBP4	P22692	258 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	PRR20E	P86478	221 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	PRR20C	P86479	221 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	PRR20D	P86480	221 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	PRR20B	P86481	221 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	PRR20A	P86496	221 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	FPGS	Q05932	587 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	SPP2	Q13103	211 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	SH3D19	Q5HYK7	790 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	LMBR1L	Q6UX01	489 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	GPR142	Q7Z601	462 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	PLEKHH3	Q7Z736	793 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	CCDC84	Q86UT8	332 aa	Predicted RBP	9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	C8orf58	Q8NAV2	365 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	ZNF280C	Q8ND82	737 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	LINS1	Q8NG48	757 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	IDI2	Q9BXS1	227 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	USP40	Q9NVE5	1235 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	IFT57	Q9NWB7	429 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	SLC27A5	Q9Y2P5	690 aa		9.06	□□□□□ -0.96
HDAC9-223	ENST00000476135	MROH5	Q6ZUA9	1318 aa		9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	CHD9	Q3L8U1	2897 aa		9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	KIAA0355	O15063	1070 aa		9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	ITGB8	P26012	769 aa		9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	CNGA1	P29973	690 aa		9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	HOXA7	P31268	230 aa	Predicted RBP	9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	KCNQ1	P51787	676 aa		9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	HMGCS2	P54868	508 aa		9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	GNAI1	P63096	354 aa		9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	IRX3	P78415	501 aa	Predicted RBP	9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	TLE2	Q04725	743 aa		9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	MAP2K5	Q13163	448 aa		9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	GJC2	Q5T442	439 aa	Predicted RBP	9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	CCAR1	Q8IX12	1150 aa	Known RBP	9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	WDR66	Q8TBY9	1149 aa		9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	RUNDC1	Q96C34	613 aa		9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	EDC3	Q96F86	508 aa	Known RBP	9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	STK31	Q9BXU1	1019 aa		9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	PBX4	Q9BYU1	374 aa		9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	TXNRD2	Q9NNW7	524 aa		9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	MYH13	Q9UKX3	1938 aa		9.05	□□□□□ -0.96
HDAC9-223	ENST00000476135	ATAD5	Q96QE3	1844 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	FAM86C2P	A6NEL3	165 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	PRR33	A8MZF0	331 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	PI4K2B	G5E9Z4	385 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	ERC2	O15083	957 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	GDF9	O60383	454 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	GLRX3	O76003	335 aa	Known RBP	9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	CLTB	P09497	229 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	RAG1	P15918	1043 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	RGS3	P49796	1198 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	HERVK_113	P62684	666 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	ERVK-9	P63128	1117 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	ERVK-24	P63145	666 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	NHLH1	Q02575	133 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	TFF2	Q03403	129 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	CCDC129	Q6ZRS4	1044 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	SH3BP5L	Q7L8J4	393 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	CCDC146	Q8IYE0	955 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	GTF3C2	Q8WUA4	911 aa	Predicted RBP	9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	OSBPL5	Q9H0X9	879 aa	Predicted RBP	9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	PORCN	Q9H237	461 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	KCNH6	Q9H252	994 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	FLRT1	Q9NZU1	646 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	RBPJL	Q9UBG7	517 aa		9.04	□□□□□ -0.96
HDAC9-223	ENST00000476135	REV3L	O60673	3130 aa		9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135	XIRP2	A4UGR9	3374 aa		9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135	LRRC37A2	A6NM11	1700 aa		9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135	USP17L5	A8MUK1	530 aa		9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135	HOXC6	P09630	235 aa		9.03	□□□□□ -0.96
HDAC9-223	ENST00000476135	ADCYAP1R1	P41586	468 aa		9.03	□□□□□ -0.96

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