RNA–Protein interactions for RNA: ENST00000475495.1

TRAIP-205, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-205ENST00000475495 CFHR5Q9BXR6 569 aa11.95□□□□□ -0.5
TRAIP-205ENST00000475495 KRT23Q9C075 422 aa11.95□□□□□ -0.5
TRAIP-205ENST00000475495 NBPF3Q9H094 633 aa11.95□□□□□ -0.5
TRAIP-205ENST00000475495 SLKQ9H2G2 1235 aaPredicted RBP11.95□□□□□ -0.5
TRAIP-205ENST00000475495 CNNM2Q9H8M5 875 aa11.95□□□□□ -0.5
TRAIP-205ENST00000475495 INCENPQ9NQS7 918 aa11.95□□□□□ -0.5
TRAIP-205ENST00000475495 NYAP2Q9P242 653 aa11.95□□□□□ -0.5
TRAIP-205ENST00000475495 AGTPBP1Q9UPW5 1226 aa11.95□□□□□ -0.5
TRAIP-205ENST00000475495 RBM8AQ9Y5S9 174 aaKnown RBP11.95□□□□□ -0.5
TRAIP-205ENST00000475495 CASP8AP2Q9UKL3 1982 aa11.94□□□□□ -0.5
TRAIP-205ENST00000475495 IGKV6D-41A0A0C4DH26 115 aa11.94□□□□□ -0.5
TRAIP-205ENST00000475495 DDX11L8A8MPP1 907 aa11.94□□□□□ -0.5
TRAIP-205ENST00000475495 PDHXO00330 501 aa11.94□□□□□ -0.5
TRAIP-205ENST00000475495 EEF2P13639 858 aaKnown RBP11.94□□□□□ -0.5
TRAIP-205ENST00000475495 CTCFP49711 727 aaPredicted RBP11.94□□□□□ -0.5
TRAIP-205ENST00000475495 ATP2B2Q01814 1243 aa11.94□□□□□ -0.5
TRAIP-205ENST00000475495 TRDNQ13061 729 aa11.94□□□□□ -0.5
TRAIP-205ENST00000475495 TAF1CQ15572 869 aaPredicted RBP11.94□□□□□ -0.5
TRAIP-205ENST00000475495 GPAT2Q6NUI2 795 aa11.94□□□□□ -0.5
TRAIP-205ENST00000475495 TBC1D10CQ8IV04 446 aa11.94□□□□□ -0.5
TRAIP-205ENST00000475495 FAM43AQ8N2R8 423 aa11.94□□□□□ -0.5
TRAIP-205ENST00000475495 C12orf42Q96LP6 360 aa11.94□□□□□ -0.5
TRAIP-205ENST00000475495 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRAIP-205ENST00000475495 ZFYVE28Q9HCC9 887 aa11.94□□□□□ -0.5
TRAIP-205ENST00000475495 MTMR4Q9NYA4 1195 aa11.94□□□□□ -0.5
TRAIP-205ENST00000475495 TMX2Q9Y320 296 aa11.94□□□□□ -0.5
TRAIP-205ENST00000475495 TACC3Q9Y6A5 838 aa11.94□□□□□ -0.5
TRAIP-205ENST00000475495 A0A1W2PRG0 241 aa11.93□□□□□ -0.5
TRAIP-205ENST00000475495 K7ELQ4 463 aaPredicted RBP11.93□□□□□ -0.5
TRAIP-205ENST00000475495 FOXN1O15353 648 aa11.93□□□□□ -0.5
TRAIP-205ENST00000475495 TTLL1O95922 423 aa11.93□□□□□ -0.5
TRAIP-205ENST00000475495 CYP21A2P08686 494 aa11.93□□□□□ -0.5
TRAIP-205ENST00000475495 ZYXQ15942 572 aaKnown RBP11.93□□□□□ -0.5
TRAIP-205ENST00000475495 CCDC178Q5BJE1 867 aa11.93□□□□□ -0.5
TRAIP-205ENST00000475495 COL13A1Q5TAT6 717 aaPredicted RBP11.93□□□□□ -0.5
TRAIP-205ENST00000475495 RNF20Q5VTR2 975 aa11.93□□□□□ -0.5
TRAIP-205ENST00000475495 SIAH1Q8IUQ4 282 aa11.93□□□□□ -0.5
TRAIP-205ENST00000475495 LPAR1Q92633 364 aa11.93□□□□□ -0.5
TRAIP-205ENST00000475495 MKL1Q969V6 931 aa11.93□□□□□ -0.5
TRAIP-205ENST00000475495 CEP95Q96GE4 821 aa11.93□□□□□ -0.5
TRAIP-205ENST00000475495 GOPCQ9HD26 462 aa11.93□□□□□ -0.5
TRAIP-205ENST00000475495 EMILIN3Q9NT22 766 aa11.93□□□□□ -0.5
TRAIP-205ENST00000475495 TCP11L1Q9NUJ3 509 aa11.93□□□□□ -0.5
TRAIP-205ENST00000475495 CLIP2Q9UDT6 1046 aa11.93□□□□□ -0.5
TRAIP-205ENST00000475495 PNMA3Q9UL41 463 aa11.93□□□□□ -0.5
TRAIP-205ENST00000475495 SYNPO2Q9UMS6 1093 aa11.93□□□□□ -0.5
TRAIP-205ENST00000475495 NEDD4P46934 1319 aa11.92□□□□□ -0.5
TRAIP-205ENST00000475495 TBC1D8O95759 1140 aa11.92□□□□□ -0.5
TRAIP-205ENST00000475495 PRR29P0C7W0 189 aa11.92□□□□□ -0.5
TRAIP-205ENST00000475495 OSBPP22059 807 aa11.92□□□□□ -0.5
TRAIP-205ENST00000475495 MCCP23508 829 aa11.92□□□□□ -0.5
TRAIP-205ENST00000475495 HOXA7P31268 230 aaPredicted RBP11.92□□□□□ -0.5
TRAIP-205ENST00000475495 CRHR2Q13324 411 aa11.92□□□□□ -0.5
TRAIP-205ENST00000475495 NECTIN1Q15223 517 aa11.92□□□□□ -0.5
TRAIP-205ENST00000475495 NOM1Q5C9Z4 860 aaKnown RBP11.92□□□□□ -0.5
TRAIP-205ENST00000475495 TREML2Q5T2D2 321 aa11.92□□□□□ -0.5
TRAIP-205ENST00000475495 IQCA1Q86XH1 822 aa11.92□□□□□ -0.5
TRAIP-205ENST00000475495 CLEC10AQ8IUN9 316 aa11.92□□□□□ -0.5
TRAIP-205ENST00000475495 PARK7Q99497 189 aaKnown RBP11.92□□□□□ -0.5
TRAIP-205ENST00000475495 VCPKMTQ9H867 229 aa11.92□□□□□ -0.5
TRAIP-205ENST00000475495 B4E1Z4 1266 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 USP17L15C9J2P7 530 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 USP17L13C9JLJ4 530 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 USP17L11C9JVI0 530 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 USP17L18D6R9N7 530 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 USP17L22D6RA61 530 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 USP17L17D6RBQ6 530 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 USP17L19D6RCP7 530 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 USP17L20D6RJB6 530 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 E7EWF7 191 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 SLC27A2O14975 620 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 TLR2O60603 784 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 KDM4AO75164 1064 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 HSP90AA1P07900 732 aaKnown RBP11.91□□□□□ -0.5
TRAIP-205ENST00000475495 HSPA8P11142 646 aaKnown RBP11.91□□□□□ -0.5
TRAIP-205ENST00000475495 IRX3P78415 501 aaPredicted RBP11.91□□□□□ -0.5
TRAIP-205ENST00000475495 USP17L24Q0WX57 530 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 CREB3L3Q68CJ9 461 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 RALYLQ86SE5 291 aaKnown RBP11.91□□□□□ -0.5
TRAIP-205ENST00000475495 NCOA7Q8NI08 942 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 TTC14Q96N46 770 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 GBP4Q96PP9 640 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 IL17RBQ9NRM6 502 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 ZSWIM5Q9P217 1185 aa11.91□□□□□ -0.5
TRAIP-205ENST00000475495 ST18O60284 1047 aa11.9□□□□□ -0.5
TRAIP-205ENST00000475495 NMT2O60551 498 aa11.9□□□□□ -0.5
TRAIP-205ENST00000475495 ZKSCAN1P17029 563 aaPredicted RBP11.9□□□□□ -0.5
TRAIP-205ENST00000475495 VCAM1P19320 739 aa11.9□□□□□ -0.5
TRAIP-205ENST00000475495 NOVP48745 357 aa11.9□□□□□ -0.5
TRAIP-205ENST00000475495 LBX1P52954 281 aa11.9□□□□□ -0.5
TRAIP-205ENST00000475495 DGKZQ13574 1117 aa11.9□□□□□ -0.5
TRAIP-205ENST00000475495 CATSPERGQ6ZRH7 1159 aa11.9□□□□□ -0.5
TRAIP-205ENST00000475495 SMCR8Q8TEV9 937 aaPredicted RBP11.9□□□□□ -0.5
TRAIP-205ENST00000475495 ASCC2Q9H1I8 757 aaPredicted RBP11.9□□□□□ -0.5
TRAIP-205ENST00000475495 TSKSQ9UJT2 592 aa11.9□□□□□ -0.5
TRAIP-205ENST00000475495 STX8Q9UNK0 236 aa11.9□□□□□ -0.5
TRAIP-205ENST00000475495 F5H6K3 240 aa11.89□□□□□ -0.51
TRAIP-205ENST00000475495 GPR25O00155 361 aa11.89□□□□□ -0.51
TRAIP-205ENST00000475495 WDR46O15213 610 aaKnown RBP11.89□□□□□ -0.51
TRAIP-205ENST00000475495 RAD21O60216 631 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms