RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 KRT40Q6A162 431 aa15.91■□□□□ 0.14
TRAF4-210ENST00000475329 OTUD7BQ6GQQ9 843 aa15.91■□□□□ 0.14
TRAF4-210ENST00000475329 SAMD7Q7Z3H4 446 aa15.91■□□□□ 0.14
TRAF4-210ENST00000475329 SRBD1Q8N5C6 995 aaKnown RBP15.91■□□□□ 0.14
TRAF4-210ENST00000475329 LZTS2Q9BRK4 669 aa15.91■□□□□ 0.14
TRAF4-210ENST00000475329 TMEM39BQ9GZU3 492 aa15.91■□□□□ 0.14
TRAF4-210ENST00000475329 GPRC5DQ9NZD1 345 aa15.91■□□□□ 0.14
TRAF4-210ENST00000475329 MAD2L2Q9UI95 211 aa15.91■□□□□ 0.14
TRAF4-210ENST00000475329 DOCK1Q14185 1865 aa15.91■□□□□ 0.14
TRAF4-210ENST00000475329 PALM3A6NDB9 673 aaPredicted RBP15.9■□□□□ 0.14
TRAF4-210ENST00000475329 TBC1D12O60347 775 aa15.9■□□□□ 0.14
TRAF4-210ENST00000475329 PRPF40AO75400 957 aaKnown RBP15.9■□□□□ 0.14
TRAF4-210ENST00000475329 XBP1P17861 261 aa15.9■□□□□ 0.14
TRAF4-210ENST00000475329 GUCY1A2P33402 732 aa15.9■□□□□ 0.14
TRAF4-210ENST00000475329 BRAPQ7Z569 592 aa15.9■□□□□ 0.14
TRAF4-210ENST00000475329 CLEC10AQ8IUN9 316 aa15.9■□□□□ 0.14
TRAF4-210ENST00000475329 LRRC47Q8N1G4 583 aaKnown RBP15.9■□□□□ 0.14
TRAF4-210ENST00000475329 KANSL2Q9H9L4 492 aa15.9■□□□□ 0.14
TRAF4-210ENST00000475329 CLIP2Q9UDT6 1046 aa15.9■□□□□ 0.14
TRAF4-210ENST00000475329 MTMR7Q9Y216 660 aa15.9■□□□□ 0.14
TRAF4-210ENST00000475329 POLR2AP24928 1970 aaKnown RBP15.89■□□□□ 0.13
TRAF4-210ENST00000475329 UBE2Q2LH0YL09 131 aa15.89■□□□□ 0.13
TRAF4-210ENST00000475329 FIBPO43427 364 aa15.89■□□□□ 0.13
TRAF4-210ENST00000475329 GDF11O95390 407 aa15.89■□□□□ 0.13
TRAF4-210ENST00000475329 KIF23Q02241 960 aaPredicted RBP15.89■□□□□ 0.13
TRAF4-210ENST00000475329 RASA3Q14644 834 aa15.89■□□□□ 0.13
TRAF4-210ENST00000475329 ASPRV1Q53RT3 343 aa15.89■□□□□ 0.13
TRAF4-210ENST00000475329 ATL3Q6DD88 541 aa15.89■□□□□ 0.13
TRAF4-210ENST00000475329 FAM173BQ6P4H8 233 aa15.89■□□□□ 0.13
TRAF4-210ENST00000475329 STAG2Q8N3U4 1231 aa15.89■□□□□ 0.13
TRAF4-210ENST00000475329 CABP5Q9NP86 173 aa15.89■□□□□ 0.13
TRAF4-210ENST00000475329 GJB4Q9NTQ9 266 aa15.89■□□□□ 0.13
TRAF4-210ENST00000475329 NYAP2Q9P242 653 aa15.89■□□□□ 0.13
TRAF4-210ENST00000475329 HACL1Q9UJ83 578 aa15.89■□□□□ 0.13
TRAF4-210ENST00000475329 V9GY48 417 aaPredicted RBP15.89■□□□□ 0.13
TRAF4-210ENST00000475329 PDHBP11177 359 aa15.88■□□□□ 0.13
TRAF4-210ENST00000475329 ATP2B2Q01814 1243 aa15.88■□□□□ 0.13
TRAF4-210ENST00000475329 ICA1Q05084 483 aa15.88■□□□□ 0.13
TRAF4-210ENST00000475329 GNL2Q13823 731 aaKnown RBP15.88■□□□□ 0.13
TRAF4-210ENST00000475329 SEPT2Q15019 361 aa15.88■□□□□ 0.13
TRAF4-210ENST00000475329 SAFBQ15424 915 aaKnown RBP eCLIP15.88■□□□□ 0.13
TRAF4-210ENST00000475329 PKN1Q16512 942 aa15.88■□□□□ 0.13
TRAF4-210ENST00000475329 C9orf131Q5VYM1 1079 aa15.88■□□□□ 0.13
TRAF4-210ENST00000475329 USP48Q86UV5 1035 aa15.88■□□□□ 0.13
TRAF4-210ENST00000475329 APOBEC3FQ8IUX4 373 aaKnown RBP15.88■□□□□ 0.13
TRAF4-210ENST00000475329 ZNF396Q96N95 335 aaPredicted RBP15.88■□□□□ 0.13
TRAF4-210ENST00000475329 SPZ1Q9BXG8 430 aa15.88■□□□□ 0.13
TRAF4-210ENST00000475329 SCAND2PQ9GZW5 306 aaPredicted RBP15.88■□□□□ 0.13
TRAF4-210ENST00000475329 GDPD2Q9HCC8 539 aa15.88■□□□□ 0.13
TRAF4-210ENST00000475329 PGAP2Q9UHJ9 254 aa15.88■□□□□ 0.13
TRAF4-210ENST00000475329 USP17L5A8MUK1 530 aa15.87■□□□□ 0.13
TRAF4-210ENST00000475329 KLRF2D3W0D1 207 aa15.87■□□□□ 0.13
TRAF4-210ENST00000475329 GH2P01242 217 aa15.87■□□□□ 0.13
TRAF4-210ENST00000475329 MMP1P03956 469 aa15.87■□□□□ 0.13
TRAF4-210ENST00000475329 SNHG28P0DPA3 235 aa15.87■□□□□ 0.13
TRAF4-210ENST00000475329 SCG2P13521 617 aa15.87■□□□□ 0.13
TRAF4-210ENST00000475329 EEF2P13639 858 aaKnown RBP15.87■□□□□ 0.13
TRAF4-210ENST00000475329 SMARCA1P28370 1054 aa15.87■□□□□ 0.13
TRAF4-210ENST00000475329 LMOD1P29536 600 aaPredicted RBP15.87■□□□□ 0.13
TRAF4-210ENST00000475329 PFKFB3Q16875 520 aaPredicted RBP15.87■□□□□ 0.13
TRAF4-210ENST00000475329 SHROOM1Q2M3G4 852 aaPredicted RBP15.87■□□□□ 0.13
TRAF4-210ENST00000475329 TRPM4Q8TD43 1214 aa15.87■□□□□ 0.13
TRAF4-210ENST00000475329 MKL1Q969V6 931 aa15.87■□□□□ 0.13
TRAF4-210ENST00000475329 CFAP45Q9UL16 551 aa15.87■□□□□ 0.13
TRAF4-210ENST00000475329 DDX49Q9Y6V7 483 aaKnown RBP15.87■□□□□ 0.13
TRAF4-210ENST00000475329 ASTN2O75129 1339 aaPredicted RBP15.87■□□□□ 0.13
TRAF4-210ENST00000475329 hCG_1642624A0A1W2PR95 340 aa15.86■□□□□ 0.13
TRAF4-210ENST00000475329 KIF28PB7ZC32 967 aa15.86■□□□□ 0.13
TRAF4-210ENST00000475329 MBD3O95983 291 aa15.86■□□□□ 0.13
TRAF4-210ENST00000475329 GOLGA8HP0CJ92 632 aa15.86■□□□□ 0.13
TRAF4-210ENST00000475329 RRP1BQ14684 758 aaKnown RBP15.86■□□□□ 0.13
TRAF4-210ENST00000475329 GPR162Q16538 588 aa15.86■□□□□ 0.13
TRAF4-210ENST00000475329 KLHL40Q2TBA0 621 aa15.86■□□□□ 0.13
TRAF4-210ENST00000475329 USP17L2Q6R6M4 530 aa15.86■□□□□ 0.13
TRAF4-210ENST00000475329 RASGRP2Q7LDG7 609 aa15.86■□□□□ 0.13
TRAF4-210ENST00000475329 CDAN1Q8IWY9 1227 aa15.86■□□□□ 0.13
TRAF4-210ENST00000475329 SPATA32Q96LK8 384 aa15.86■□□□□ 0.13
TRAF4-210ENST00000475329 SCN4AP35499 1836 aa15.86■□□□□ 0.13
TRAF4-210ENST00000475329 ELP1O95163 1332 aa15.86■□□□□ 0.13
TRAF4-210ENST00000475329 GOLGB1Q14789 3259 aaKnown RBP15.85■□□□□ 0.13
TRAF4-210ENST00000475329 U2AF2P26368 475 aaKnown RBP eCLIP15.85■□□□□ 0.131e-6■□□□□ 8.6
TRAF4-210ENST00000475329 MAP3K10Q02779 954 aa15.85■□□□□ 0.13
TRAF4-210ENST00000475329 ZNF543Q08ER8 600 aa15.85■□□□□ 0.13
TRAF4-210ENST00000475329 CCDC96Q2M329 555 aa15.85■□□□□ 0.13
TRAF4-210ENST00000475329 GPATCH4Q5T3I0 446 aaKnown RBP15.85■□□□□ 0.13
TRAF4-210ENST00000475329 DCAF4Q8WV16 495 aa15.85■□□□□ 0.13
TRAF4-210ENST00000475329 TEPSINQ96N21 525 aa15.85■□□□□ 0.13
TRAF4-210ENST00000475329 PHF20Q9BVI0 1012 aa15.85■□□□□ 0.13
TRAF4-210ENST00000475329 VPS54Q9P1Q0 977 aa15.85■□□□□ 0.13
TRAF4-210ENST00000475329 TFIP11Q9UBB9 837 aaKnown RBP15.85■□□□□ 0.13
TRAF4-210ENST00000475329 ZBTB21Q9ULJ3 1066 aa15.85■□□□□ 0.13
TRAF4-210ENST00000475329 SYNPO2Q9UMS6 1093 aa15.85■□□□□ 0.13
TRAF4-210ENST00000475329 KCNJ14Q9UNX9 436 aa15.85■□□□□ 0.13
TRAF4-210ENST00000475329 DDNO94850 711 aaPredicted RBP15.84■□□□□ 0.13
TRAF4-210ENST00000475329 EPS15P42566 896 aa15.84■□□□□ 0.13
TRAF4-210ENST00000475329 UBE2HP62256 183 aa15.84■□□□□ 0.13
TRAF4-210ENST00000475329 JAG1P78504 1218 aa15.84■□□□□ 0.13
TRAF4-210ENST00000475329 SLC35G1Q2M3R5 365 aa15.84■□□□□ 0.13
TRAF4-210ENST00000475329 ANGEL2Q5VTE6 544 aaKnown RBP15.84■□□□□ 0.13
TRAF4-210ENST00000475329 MYSM1Q5VVJ2 828 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms