RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 LRIT3Q3SXY7 679 aa30.11■■■□□ 2.41
TMEM54-205ENST00000475208 TMEM179Q6ZVK1 233 aa30.11■■■□□ 2.41
TMEM54-205ENST00000475208 ARMT1Q9H993 441 aa30.11■■■□□ 2.41
TMEM54-205ENST00000475208 MSCO60682 206 aa30.1■■■□□ 2.41
TMEM54-205ENST00000475208 SIRT2Q8IXJ6 389 aa30.1■■■□□ 2.41
TMEM54-205ENST00000475208 DYNLL2Q96FJ2 89 aa30.1■■■□□ 2.41
TMEM54-205ENST00000475208 MOV10L1Q9BXT6 1211 aaKnown RBP30.1■■■□□ 2.41
TMEM54-205ENST00000475208 HOXC10Q9NYD6 342 aa30.1■■■□□ 2.41
TMEM54-205ENST00000475208 SWAP70Q9UH65 585 aa30.1■■■□□ 2.41
TMEM54-205ENST00000475208 A0A0G2JMZ2 1700 aa30.1■■■□□ 2.41
TMEM54-205ENST00000475208 ZNF236Q9UL36 1845 aa30.1■■■□□ 2.41
TMEM54-205ENST00000475208 GPR153Q6NV75 609 aa30.09■■■□□ 2.41
TMEM54-205ENST00000475208 PAG1Q9NWQ8 432 aa30.09■■■□□ 2.41
TMEM54-205ENST00000475208 MBD4O95243 580 aa30.08■■■□□ 2.41
TMEM54-205ENST00000475208 SLFNL1Q499Z3 407 aa30.08■■■□□ 2.41
TMEM54-205ENST00000475208 KIAA1755Q5JYT7 1200 aa30.08■■■□□ 2.41
TMEM54-205ENST00000475208 DPP9Q86TI2 863 aa30.08■■■□□ 2.41
TMEM54-205ENST00000475208 TRPV1Q8NER1 839 aa30.08■■■□□ 2.41
TMEM54-205ENST00000475208 LPAR1Q92633 364 aa30.08■■■□□ 2.41
TMEM54-205ENST00000475208 SENP6Q9GZR1 1112 aaPredicted RBP30.08■■■□□ 2.41
TMEM54-205ENST00000475208 SPATC1LQ9H0A9 340 aa30.08■■■□□ 2.41
TMEM54-205ENST00000475208 BOLA2Q9H3K6 86 aa30.08■■■□□ 2.41
TMEM54-205ENST00000475208 ZBTB40Q9NUA8 1239 aa30.08■■■□□ 2.41
TMEM54-205ENST00000475208 DDX19BQ9UMR2 479 aa30.08■■■□□ 2.41
TMEM54-205ENST00000475208 COG6Q9Y2V7 657 aa30.08■■■□□ 2.41
TMEM54-205ENST00000475208 COL6A3P12111 3177 aa30.07■■■□□ 2.4
TMEM54-205ENST00000475208 RLFQ13129 1914 aa30.07■■■□□ 2.4
TMEM54-205ENST00000475208 PRKAB2O43741 272 aa30.07■■■□□ 2.4
TMEM54-205ENST00000475208 RAB11FIP3O75154 756 aa30.07■■■□□ 2.4
TMEM54-205ENST00000475208 IGHA2P01877 340 aa30.07■■■□□ 2.4
TMEM54-205ENST00000475208 ADORA2AP29274 412 aa30.07■■■□□ 2.4
TMEM54-205ENST00000475208 ADD2P35612 726 aa30.07■■■□□ 2.4
TMEM54-205ENST00000475208 CLEC10AQ8IUN9 316 aa30.07■■■□□ 2.4
TMEM54-205ENST00000475208 SLC17A8Q8NDX2 589 aa30.07■■■□□ 2.4
TMEM54-205ENST00000475208 SHCBP1Q8NEM2 672 aa30.07■■■□□ 2.4
TMEM54-205ENST00000475208 MYH8P13535 1937 aa30.06■■■□□ 2.4
TMEM54-205ENST00000475208 CYBAP13498 195 aa30.06■■■□□ 2.4
TMEM54-205ENST00000475208 AKR1B1P15121 316 aa30.06■■■□□ 2.4
TMEM54-205ENST00000475208 ERCC3P19447 782 aa30.06■■■□□ 2.4
TMEM54-205ENST00000475208 MDM2Q00987 491 aaPredicted RBP30.06■■■□□ 2.4
TMEM54-205ENST00000475208 DEFB123Q8N688 67 aa30.06■■■□□ 2.4
TMEM54-205ENST00000475208 ARHGEF10LQ9HCE6 1279 aa30.06■■■□□ 2.4
TMEM54-205ENST00000475208 ATP8A2Q9NTI2 1148 aa30.06■■■□□ 2.4
TMEM54-205ENST00000475208 STRNO43815 780 aa30.05■■■□□ 2.4
TMEM54-205ENST00000475208 ICA1Q05084 483 aa30.05■■■□□ 2.4
TMEM54-205ENST00000475208 MB21D1Q8N884 522 aa30.05■■■□□ 2.4
TMEM54-205ENST00000475208 DNM1LO00429 736 aa30.04■■■□□ 2.4
TMEM54-205ENST00000475208 FLOT1O75955 427 aa30.04■■■□□ 2.4
TMEM54-205ENST00000475208 DSG3P32926 999 aa30.04■■■□□ 2.4
TMEM54-205ENST00000475208 OLFML2BQ68BL8 750 aa30.04■■■□□ 2.4
TMEM54-205ENST00000475208 Q7L0L9 218 aa30.04■■■□□ 2.4
TMEM54-205ENST00000475208 SIAH1Q8IUQ4 282 aa30.04■■■□□ 2.4
TMEM54-205ENST00000475208 SPICE1Q8N0Z3 855 aa30.04■■■□□ 2.4
TMEM54-205ENST00000475208 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.04■■■□□ 2.4
TMEM54-205ENST00000475208 SH2D4AQ9H788 454 aa30.04■■■□□ 2.4
TMEM54-205ENST00000475208 TMX2Q9Y320 296 aa30.04■■■□□ 2.4
TMEM54-205ENST00000475208 BAZ2AQ9UIF9 1905 aaKnown RBP30.04■■■□□ 2.4
TMEM54-205ENST00000475208 DNAH12Q6ZR08 3092 aa30.03■■■□□ 2.4
TMEM54-205ENST00000475208 ATP5JP18859 108 aa30.03■■■□□ 2.4
TMEM54-205ENST00000475208 ATN1P54259 1190 aaPredicted RBP30.03■■■□□ 2.4
TMEM54-205ENST00000475208 PLS1Q14651 629 aa30.03■■■□□ 2.4
TMEM54-205ENST00000475208 DIEXFQ68CQ4 756 aaKnown RBP30.03■■■□□ 2.4
TMEM54-205ENST00000475208 ATG4CQ96DT6 458 aa30.03■■■□□ 2.4
TMEM54-205ENST00000475208 VCPKMTQ9H867 229 aa30.03■■■□□ 2.4
TMEM54-205ENST00000475208 CYP2D7A0A087X1C5 515 aa30.02■■■□□ 2.4
TMEM54-205ENST00000475208 SMIM22K7EJ46 135 aa30.02■■■□□ 2.4
TMEM54-205ENST00000475208 COBLO75128 1261 aa30.02■■■□□ 2.4
TMEM54-205ENST00000475208 HAUS7Q99871 368 aa30.02■■■□□ 2.4
TMEM54-205ENST00000475208 CHGBP05060 677 aa30.01■■■□□ 2.39
TMEM54-205ENST00000475208 C12orf60Q5U649 245 aa30.01■■■□□ 2.39
TMEM54-205ENST00000475208 SAMD1Q6SPF0 538 aaPredicted RBP30.01■■■□□ 2.39
TMEM54-205ENST00000475208 NCAPG2Q86XI2 1143 aa30.01■■■□□ 2.39
TMEM54-205ENST00000475208 AMOTL1Q8IY63 956 aa30.01■■■□□ 2.39
TMEM54-205ENST00000475208 CCDC17Q96LX7 622 aa30.01■■■□□ 2.39
TMEM54-205ENST00000475208 MROH8Q9H579 483 aa30.01■■■□□ 2.39
TMEM54-205ENST00000475208 CDK8P49336 464 aa30■■■□□ 2.39
TMEM54-205ENST00000475208 GJC2Q5T442 439 aaPredicted RBP30■■■□□ 2.39
TMEM54-205ENST00000475208 SLC5A4Q9NY91 659 aa30■■■□□ 2.39
TMEM54-205ENST00000475208 USP17L12C9JPN9 530 aa29.99■■■□□ 2.39
TMEM54-205ENST00000475208 USP17L21D6R901 530 aa29.99■■■□□ 2.39
TMEM54-205ENST00000475208 WDR46O15213 610 aaKnown RBP29.99■■■□□ 2.39
TMEM54-205ENST00000475208 ANO1Q5XXA6 986 aa29.99■■■□□ 2.39
TMEM54-205ENST00000475208 C16orf86Q6ZW13 317 aa29.99■■■□□ 2.39
TMEM54-205ENST00000475208 ABRAQ8N0Z2 381 aa29.99■■■□□ 2.39
TMEM54-205ENST00000475208 DDRGK1Q96HY6 314 aa29.99■■■□□ 2.39
TMEM54-205ENST00000475208 LBHD1Q9BQE6 289 aaPredicted RBP29.99■■■□□ 2.39
TMEM54-205ENST00000475208 RTP1P59025 263 aa29.98■■■□□ 2.39
TMEM54-205ENST00000475208 UBE3CQ15386 1083 aa29.98■■■□□ 2.39
TMEM54-205ENST00000475208 ARRDC4Q8NCT1 418 aa29.98■■■□□ 2.39
TMEM54-205ENST00000475208 PARP14Q460N5 1801 aa29.98■■■□□ 2.39
TMEM54-205ENST00000475208 MYH7P12883 1935 aa29.97■■■□□ 2.39
TMEM54-205ENST00000475208 SEPT4O43236 478 aa29.97■■■□□ 2.39
TMEM54-205ENST00000475208 CHMP4BQ9H444 224 aaKnown RBP29.97■■■□□ 2.39
TMEM54-205ENST00000475208 MTMR10Q9NXD2 777 aa29.97■■■□□ 2.39
TMEM54-205ENST00000475208 SLC4A4Q9Y6R1 1079 aa29.97■■■□□ 2.39
TMEM54-205ENST00000475208 KBTBD13C9JR72 458 aa29.96■■■□□ 2.39
TMEM54-205ENST00000475208 EEF2P13639 858 aaKnown RBP29.96■■■□□ 2.39
TMEM54-205ENST00000475208 TMEM132BQ14DG7 1078 aa29.96■■■□□ 2.39
TMEM54-205ENST00000475208 PRKAG2Q9UGJ0 569 aa29.96■■■□□ 2.39
TMEM54-205ENST00000475208 FCER1AP12319 257 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms