RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 KRT23Q9C075 422 aa9.06□□□□□ -0.96
CCDC93-208ENST00000474546 HSD3B7Q9H2F3 369 aa9.06□□□□□ -0.96
CCDC93-208ENST00000474546 SLC52A2Q9HAB3 445 aa9.06□□□□□ -0.96
CCDC93-208ENST00000474546 LGR6Q9HBX8 967 aa9.06□□□□□ -0.96
CCDC93-208ENST00000474546 C5P01031 1676 aa9.06□□□□□ -0.96
CCDC93-208ENST00000474546 C4AP0C0L4 1744 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 C4BP0C0L5 1744 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 A0A087WZG4 1122 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 LRRC10BA6NIK2 292 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 GOLGA8KD6RF30 607 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 H7C1W4 665 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 PSMD14O00487 310 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 BIN1O00499 593 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 EBAG9O00559 213 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 KRT86O43790 486 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 SASH3O75995 380 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 DEXIO95424 95 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 POLR3DP05423 398 aaPredicted RBP9.05□□□□□ -0.96
CCDC93-208ENST00000474546 PCP11498 1178 aaKnown RBP9.05□□□□□ -0.96
CCDC93-208ENST00000474546 IFNAR1P17181 557 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 GUCY2CP25092 1073 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 ARHGAP25P42331 645 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 NOP2P46087 812 aaKnown RBP9.05□□□□□ -0.96
CCDC93-208ENST00000474546 PDIA6Q15084 440 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 KRT40Q6A162 431 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 TTLL5Q6EMB2 1281 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 MMS22LQ6ZRQ5 1243 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 DDX46Q7L014 1031 aaKnown RBP9.05□□□□□ -0.96
CCDC93-208ENST00000474546 TAX1BP1Q86VP1 789 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 C10orf67Q8IYJ2 551 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 IGSF22Q8N9C0 903 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 DDX54Q8TDD1 881 aaKnown RBP9.05□□□□□ -0.96
CCDC93-208ENST00000474546 XAGE3Q8WTP9 111 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 CCDC102AQ96A19 550 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 NCAPGQ9BPX3 1015 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 RNF41Q9H4P4 317 aaPredicted RBP9.05□□□□□ -0.96
CCDC93-208ENST00000474546 CWC25Q9NXE8 425 aaPredicted RBP9.05□□□□□ -0.96
CCDC93-208ENST00000474546 AATFQ9NY61 560 aaKnown RBP eCLIP9.05□□□□□ -0.96
CCDC93-208ENST00000474546 RNF14Q9UBS8 474 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 GGA2Q9UJY4 613 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 HPS5Q9UPZ3 1129 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 JRKLQ9Y4A0 524 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 PCDHA5Q9Y5H7 936 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 SRPRBQ9Y5M8 271 aaKnown RBP9.05□□□□□ -0.96
CCDC93-208ENST00000474546 SCN4AP35499 1836 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 SYNRGQ9UMZ2 1314 aa9.05□□□□□ -0.96
CCDC93-208ENST00000474546 RANBP2P49792 3224 aaKnown RBP9.04□□□□□ -0.96
CCDC93-208ENST00000474546 MYH7P12883 1935 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 RTL9Q8NET4 1388 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 A0A1W2PQC6 194 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 ERICH2A1L162 156 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 IQCA1LA6NCM1 817 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 TMCO5BA8MYB1 307 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 PPEF1O14829 653 aaPredicted RBP9.04□□□□□ -0.96
CCDC93-208ENST00000474546 KIF1CO43896 1103 aaKnown RBP9.04□□□□□ -0.96
CCDC93-208ENST00000474546 ZEB2O60315 1214 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 SHOX2O60902 331 aaPredicted RBP9.04□□□□□ -0.96
CCDC93-208ENST00000474546 FMNL1O95466 1100 aaPredicted RBP9.04□□□□□ -0.96
CCDC93-208ENST00000474546 GCP02774 474 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 UQCRFS1P1P0C7P4 283 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 ATP1A3P13637 1013 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 TATP17735 454 aaPredicted RBP9.04□□□□□ -0.96
CCDC93-208ENST00000474546 KCNA3P22001 575 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 CALRP27797 417 aaKnown RBP9.04□□□□□ -0.96
CCDC93-208ENST00000474546 CYLC1P35663 651 aaPredicted RBP9.04□□□□□ -0.96
CCDC93-208ENST00000474546 TRAPPC10P48553 1259 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 MDM2Q00987 491 aaPredicted RBP9.04□□□□□ -0.96
CCDC93-208ENST00000474546 GRM1Q13255 1194 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 NNTQ13423 1086 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 DRP2Q13474 957 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 STIM1Q13586 685 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 MCM6Q14566 821 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 UBE3CQ15386 1083 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 PKN2Q16513 984 aaKnown RBP9.04□□□□□ -0.96
CCDC93-208ENST00000474546 ALS2CLQ60I27 953 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 CYP4F22Q6NT55 531 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 SHC4Q6S5L8 630 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 MPRIPQ6WCQ1 1025 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 COPS6Q7L5N1 327 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 CTU1Q7Z7A3 348 aaKnown RBP9.04□□□□□ -0.96
CCDC93-208ENST00000474546 METTL16Q86W50 562 aaKnown RBP9.04□□□□□ -0.96
CCDC93-208ENST00000474546 CCDC50Q8IVM0 306 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 CCDC170Q8IYT3 715 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 IFNL2Q8IZJ0 200 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 C3orf20Q8ND61 904 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 C1orf131Q8NDD1 294 aaKnown RBP9.04□□□□□ -0.96
CCDC93-208ENST00000474546 FAM76AQ8TAV0 307 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 CCDC47Q96A33 483 aaKnown RBP9.04□□□□□ -0.96
CCDC93-208ENST00000474546 LTV1Q96GA3 475 aaPredicted RBP9.04□□□□□ -0.96
CCDC93-208ENST00000474546 WDR24Q96S15 920 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 MAP3K14Q99558 947 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.04□□□□□ -0.96
CCDC93-208ENST00000474546 MAGEF1Q9HAY2 307 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 PDE11AQ9HCR9 933 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 A1CFQ9NQ94 594 aaKnown RBP9.04□□□□□ -0.96
CCDC93-208ENST00000474546 MAN1B1Q9UKM7 699 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 MYO6Q9UM54 1294 aa9.04□□□□□ -0.96
CCDC93-208ENST00000474546 EIF3CLB5ME19 914 aaKnown RBP9.03□□□□□ -0.96
CCDC93-208ENST00000474546 SH2B2O14492 632 aaPredicted RBP9.03□□□□□ -0.96
CCDC93-208ENST00000474546 KIAA0754O94854 1291 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms