RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CDR1P51861 262 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 SUZ12Q15022 739 aaKnown RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 DBX2Q6ZNG2 339 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 MMS22LQ6ZRQ5 1243 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 C10orf67Q8IYJ2 551 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 TMEM87AQ8NBN3 555 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.94□□□□□ -1.78
UBR3-208ENST00000474426 ZNF280CQ8ND82 737 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 GOT1L1Q8NHS2 421 aaPredicted RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 EXOC4Q96A65 974 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 DESI2Q9BSY9 194 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 CYP4F11Q9HBI6 524 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 NCOA5Q9HCD5 579 aaKnown RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 ZIM2Q9NZV7 527 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 DDX41Q9UJV9 622 aaKnown RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 FAM184BQ9ULE4 1060 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 WDR37Q9Y2I8 494 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 TRIM17Q9Y577 477 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 PPP1R12BO60237 982 aaPredicted RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 REC8O95072 547 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 STAMBPO95630 424 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 VARSP26640 1264 aaKnown RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 RRP1P56182 461 aaKnown RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 LRRC74AQ0VAA2 488 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 SMC1AQ14683 1233 aaKnown RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 CRY1Q16526 586 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 BBS9Q3SYG4 887 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 ZER1Q7Z7L7 766 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 LRRTM3Q86VH5 581 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 FAM114A1Q8IWE2 563 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 GBP7Q8N8V2 638 aaPredicted RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 SPATA18Q8TC71 538 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 ACMSDQ8TDX5 336 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 ARL8AQ96BM9 186 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 TIFAQ96CG3 184 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 CFAP36Q96G28 342 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 EPSTI1Q96J88 318 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 NACAP1Q9BZK3 213 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 B3GNT4Q9C0J1 378 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 OSBPL3Q9H4L5 887 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 PAPOLBQ9NRJ5 636 aaKnown RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 RYDENQ9NUL5 291 aaKnown RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 RNGTTO60942 597 aaKnown RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 PGRP06401 933 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 SLC16A2P36021 539 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 PPM1FP49593 454 aaPredicted RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 INHBCP55103 352 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 C21orf58P58505 322 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 RACK1P63244 317 aaKnown RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 PPIDQ08752 370 aaKnown RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 TTC31Q49AM3 519 aaPredicted RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 METTL11BQ5VVY1 283 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 KIAA0907Q7Z7F0 614 aaPredicted RBP3.94□□□□□ -1.78
UBR3-208ENST00000474426 DNAAF4Q8WXU2 420 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 THAP11Q96EK4 314 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 FNBP1Q96RU3 617 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 HPS4Q9NQG7 708 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 CCPG1Q9ULG6 757 aa3.94□□□□□ -1.78
UBR3-208ENST00000474426 ABCC9O60706 1549 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 MAP3K7O43318 606 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 NDUFB5O43674 189 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 SLC5A1P13866 664 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 PBLDP30039 288 aaPredicted RBP3.93□□□□□ -1.78
UBR3-208ENST00000474426 MLLT1Q03111 559 aaPredicted RBP3.93□□□□□ -1.78
UBR3-208ENST00000474426 TCIRG1Q13488 830 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 SF3B3Q15393 1217 aaKnown RBP3.93□□□□□ -1.78
UBR3-208ENST00000474426 BTNL9Q6UXG8 535 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 SEPT14Q6ZU15 432 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 INTS8Q75QN2 995 aaKnown RBP3.93□□□□□ -1.78
UBR3-208ENST00000474426 NLRP14Q86W24 1093 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 CCDC116Q8IYX3 515 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 TTC39CQ8N584 583 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 GALNT6Q8NCL4 622 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 KIAA1524Q8TCG1 905 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 FNIP1Q8TF40 1166 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 ZNF594Q96JF6 807 aaPredicted RBP3.93□□□□□ -1.78
UBR3-208ENST00000474426 COG8Q96MW5 612 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 CD93Q9NPY3 652 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 BLOC1S4Q9NUP1 217 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 LCMT1Q9UIC8 334 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 SLC4A4Q9Y6R1 1079 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 CASQ2O14958 399 aaPredicted RBP3.93□□□□□ -1.78
UBR3-208ENST00000474426 RASGRP1O95267 797 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 TPM1P09493 284 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 U2AF2P26368 475 aaKnown RBP eCLIP3.93□□□□□ -1.785e-7■□□□□ 9.8
UBR3-208ENST00000474426 NEK2P51955 445 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 CAMK2BQ13554 666 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 RABEP1Q15276 862 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 ECM1Q16610 540 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 FAM173BQ6P4H8 233 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 BTN2A1Q7KYR7 527 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 OTOP3Q7RTS5 596 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 IQCA1Q86XH1 822 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 LSMEM1Q8N8F7 131 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 FAM81AQ8TBF8 368 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 TEKT4Q8WW24 435 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 FATE1Q969F0 183 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 C7orf25Q9BPX7 421 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 NUDT12Q9BQG2 462 aa3.93□□□□□ -1.78
UBR3-208ENST00000474426 DKK3Q9UBP4 350 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms