RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 REC114Q7Z4M0 266 aa5.37□□□□□ -1.55
ECHDC1-213ENST00000474240 HID1Q8IV36 788 aa5.37□□□□□ -1.55
ECHDC1-213ENST00000474240 REXO1Q8N1G1 1221 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-213ENST00000474240 JARID2Q92833 1246 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-213ENST00000474240 KCNN1Q92952 543 aa5.37□□□□□ -1.55
ECHDC1-213ENST00000474240 SLC26A8Q96RN1 970 aa5.37□□□□□ -1.55
ECHDC1-213ENST00000474240 COPRSQ9NQ92 184 aa5.37□□□□□ -1.55
ECHDC1-213ENST00000474240 PRR36Q9H6K5 1346 aa5.37□□□□□ -1.55
ECHDC1-213ENST00000474240 LRIG2O94898 1065 aa5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 GARTP22102 1010 aa5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 ERCC5P28715 1186 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 ZNF165P49910 485 aa5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 FAM160A1Q05DH4 1040 aa5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 PTPN11Q06124 597 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 PPM1JQ5JR12 505 aa5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 FBXL19Q6PCT2 694 aa5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 MPRIPQ6WCQ1 1025 aa5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 BNC2Q6ZN30 1099 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 UBE3DQ7Z6J8 389 aa5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 C12orf40Q86WS4 652 aa5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 ABHD4Q8TB40 342 aa5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 COX4I2Q96KJ9 171 aa5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 HSPA12BQ96MM6 686 aa5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 SEMA3GQ9NS98 782 aa5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 ADAMTS1Q9UHI8 967 aa5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.36□□□□□ -1.55
ECHDC1-213ENST00000474240 H3BS24 57 aa5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 RAC2P15153 192 aa5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 YARSP54577 528 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 INPP5AQ14642 412 aa5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 SKOR2Q2VWA4 1001 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 LRRFIP1Q32MZ4 808 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 ZNF394Q53GI3 561 aa5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 TMEM201Q5SNT2 666 aa5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 CDKAL1Q5VV42 579 aa5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 SLC6A19Q695T7 634 aa5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 PRRT2Q7Z6L0 340 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 SLITRK4Q8IW52 837 aa5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 MRPL41Q8IXM3 137 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 MFSD2AQ8NA29 543 aa5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 NKD1Q969G9 470 aa5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 ZNF428Q96B54 188 aa5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 KCNC2Q96PR1 638 aa5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 FOXQ1Q9C009 403 aa5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 PRDM5Q9NQX1 630 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 SLAMF8Q9P0V8 285 aa5.35□□□□□ -1.55
ECHDC1-213ENST00000474240 CNTNAP4Q9C0A0 1308 aa5.34□□□□□ -1.55
ECHDC1-213ENST00000474240 PRR33A8MZF0 331 aa5.34□□□□□ -1.55
ECHDC1-213ENST00000474240 FAM155AB1AL88 458 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-213ENST00000474240 ATE1O95260 518 aa5.34□□□□□ -1.55
ECHDC1-213ENST00000474240 EOMESO95936 686 aa5.34□□□□□ -1.55
ECHDC1-213ENST00000474240 PGRP06401 933 aa5.34□□□□□ -1.55
ECHDC1-213ENST00000474240 GRK4P32298 578 aa5.34□□□□□ -1.55
ECHDC1-213ENST00000474240 NTF4P34130 210 aa5.34□□□□□ -1.55
ECHDC1-213ENST00000474240 GJA8P48165 433 aa5.34□□□□□ -1.55
ECHDC1-213ENST00000474240 NFKB2Q00653 900 aa5.34□□□□□ -1.55
ECHDC1-213ENST00000474240 VPS37DQ86XT2 251 aa5.34□□□□□ -1.55
ECHDC1-213ENST00000474240 RASGRP4Q8TDF6 673 aa5.34□□□□□ -1.55
ECHDC1-213ENST00000474240 GPRASP2Q96D09 838 aa5.34□□□□□ -1.55
ECHDC1-213ENST00000474240 ALPK1Q96QP1 1244 aa5.34□□□□□ -1.55
ECHDC1-213ENST00000474240 IGSF5Q9NSI5 407 aa5.34□□□□□ -1.55
ECHDC1-213ENST00000474240 STRIP2Q9ULQ0 834 aa5.34□□□□□ -1.55
ECHDC1-213ENST00000474240 F6X3S4 739 aa5.33□□□□□ -1.56
ECHDC1-213ENST00000474240 ERVFC1P60507 584 aa5.33□□□□□ -1.56
ECHDC1-213ENST00000474240 TTC6Q86TZ1 520 aa5.33□□□□□ -1.56
ECHDC1-213ENST00000474240 MCATQ8IVS2 390 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-213ENST00000474240 TMPRSS5Q9H3S3 457 aa5.33□□□□□ -1.56
ECHDC1-213ENST00000474240 EHMT1Q9H9B1 1298 aa5.33□□□□□ -1.56
ECHDC1-213ENST00000474240 RTEL1Q9NZ71 1219 aa5.33□□□□□ -1.56
ECHDC1-213ENST00000474240 MAPK8IP1Q9UQF2 711 aa5.33□□□□□ -1.56
ECHDC1-213ENST00000474240 INPP5FQ9Y2H2 1132 aa5.33□□□□□ -1.56
ECHDC1-213ENST00000474240 PCDHGB7Q9Y5F8 929 aa5.33□□□□□ -1.56
ECHDC1-213ENST00000474240 CSADQ9Y600 493 aa5.33□□□□□ -1.56
ECHDC1-213ENST00000474240 TRIM13O60858 407 aa5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 HTR3BO95264 441 aa5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 CST3P01034 146 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 SRFP11831 508 aa5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 PLCG1P19174 1290 aa5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 CYP7A1P22680 504 aa5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 RACK1P63244 317 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 RAD51AP2Q09MP3 1159 aa5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 ARMCX6Q7L4S7 300 aa5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 NPM2Q86SE8 214 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 SLFN12Q8IYM2 578 aa5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 MFSD4AQ8N468 514 aa5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 CCDC120Q96HB5 630 aa5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 SEC16BQ96JE7 1060 aa5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 TMEM87BQ96K49 555 aa5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 CAPN10Q9HC96 672 aa5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 UBP1Q9NZI7 540 aa5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 GMIPQ9P107 970 aa5.32□□□□□ -1.56
ECHDC1-213ENST00000474240 MCM4P33991 863 aa5.31□□□□□ -1.56
ECHDC1-213ENST00000474240 CCNFP41002 786 aa5.31□□□□□ -1.56
ECHDC1-213ENST00000474240 ETV3P41162 512 aa5.31□□□□□ -1.56
ECHDC1-213ENST00000474240 ZC3H6P61129 1189 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-213ENST00000474240 PAK2Q13177 524 aa5.31□□□□□ -1.56
ECHDC1-213ENST00000474240 SEZ6Q53EL9 994 aa5.31□□□□□ -1.56
ECHDC1-213ENST00000474240 RALGPS1Q5JS13 557 aa5.31□□□□□ -1.56
ECHDC1-213ENST00000474240 OR6P1Q8NGX9 317 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms