RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 PARD6AQ9NPB6 346 aa3.53□□□□□ -1.84
CALD1-216ENST00000473714 PRDM7Q9NQW5 492 aa3.53□□□□□ -1.84
CALD1-216ENST00000473714 CXXC1Q9P0U4 656 aaPredicted RBP3.53□□□□□ -1.84
CALD1-216ENST00000473714 EGFL7Q9UHF1 273 aa3.53□□□□□ -1.84
CALD1-216ENST00000473714 AP4E1Q9UPM8 1137 aa3.53□□□□□ -1.84
CALD1-216ENST00000473714 ABCC5O15440 1437 aa3.53□□□□□ -1.85
CALD1-216ENST00000473714 MST1RQ04912 1400 aa3.53□□□□□ -1.85
CALD1-216ENST00000473714 TMEM131LA2VDJ0 1609 aa3.52□□□□□ -1.85
CALD1-216ENST00000473714 TCAF2A6NFQ2 919 aa3.52□□□□□ -1.85
CALD1-216ENST00000473714 ICMTO60725 284 aa3.52□□□□□ -1.85
CALD1-216ENST00000473714 CYP11A1P05108 521 aa3.52□□□□□ -1.85
CALD1-216ENST00000473714 FAM87AP0C7U9 286 aa3.52□□□□□ -1.85
CALD1-216ENST00000473714 ZNF16P17020 682 aaPredicted RBP3.52□□□□□ -1.85
CALD1-216ENST00000473714 FKBP4Q02790 459 aaKnown RBP eCLIP3.52□□□□□ -1.85
CALD1-216ENST00000473714 FSTL1Q12841 308 aa3.52□□□□□ -1.85
CALD1-216ENST00000473714 FYB2Q5VWT5 728 aa3.52□□□□□ -1.85
CALD1-216ENST00000473714 ATG14Q6ZNE5 492 aa3.52□□□□□ -1.85
CALD1-216ENST00000473714 FAM196AQ6ZSG2 479 aa3.52□□□□□ -1.85
CALD1-216ENST00000473714 ATCAYQ86WG3 371 aa3.52□□□□□ -1.85
CALD1-216ENST00000473714 ASAP3Q8TDY4 903 aa3.52□□□□□ -1.85
CALD1-216ENST00000473714 KIRREL1Q96J84 757 aa3.52□□□□□ -1.85
CALD1-216ENST00000473714 OSMRQ99650 979 aa3.52□□□□□ -1.85
CALD1-216ENST00000473714 MKNK2Q9HBH9 465 aa3.52□□□□□ -1.85
CALD1-216ENST00000473714 DCTN4Q9UJW0 460 aa3.52□□□□□ -1.85
CALD1-216ENST00000473714 CTNND2Q9UQB3 1225 aa3.52□□□□□ -1.85
CALD1-216ENST00000473714 GOLGB1Q14789 3259 aaKnown RBP3.52□□□□□ -1.85
CALD1-216ENST00000473714 LAMC1P11047 1609 aa3.52□□□□□ -1.85
CALD1-216ENST00000473714 TNRC18O15417 2968 aaPredicted RBP3.51□□□□□ -1.85
CALD1-216ENST00000473714 SYCP2Q9BX26 1530 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 CDC42BPAQ5VT25 1732 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 UNCXA6NJT0 531 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 FOXN1O15353 648 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 NDUFB5O43674 189 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 NUAK1O60285 661 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 FAM13AO94988 1023 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 RPLP1P05386 114 aaKnown RBP3.51□□□□□ -1.85
CALD1-216ENST00000473714 MAOBP27338 520 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 ITGAEP38570 1179 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 ZP2Q05996 745 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 POU4F3Q15319 338 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 EAPPQ56P03 285 aaPredicted RBP3.51□□□□□ -1.85
CALD1-216ENST00000473714 C1orf127Q8N9H9 656 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 TTC16Q8NEE8 873 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 GCC1Q96CN9 775 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 NUDT16Q96DE0 195 aaKnown RBP3.51□□□□□ -1.85
CALD1-216ENST00000473714 DIRC2Q96SL1 478 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 CHRDQ9H2X0 955 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 TMPRSS5Q9H3S3 457 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 ZCCHC4Q9H5U6 513 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 NSUN3Q9H649 340 aaKnown RBP3.51□□□□□ -1.85
CALD1-216ENST00000473714 SEPT3Q9UH03 358 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 BRPF3Q9ULD4 1205 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 ERVK-7P63135 1459 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 PIK3C2BO00750 1634 aa3.51□□□□□ -1.85
CALD1-216ENST00000473714 IGSF3O75054 1194 aa3.5□□□□□ -1.85
CALD1-216ENST00000473714 CEACAM5P06731 702 aa3.5□□□□□ -1.85
CALD1-216ENST00000473714 SYN1P17600 705 aa3.5□□□□□ -1.85
CALD1-216ENST00000473714 XPCQ01831 940 aaPredicted RBP3.5□□□□□ -1.85
CALD1-216ENST00000473714 CDK5R2Q13319 367 aa3.5□□□□□ -1.85
CALD1-216ENST00000473714 IKZF1Q13422 519 aa3.5□□□□□ -1.85
CALD1-216ENST00000473714 MTMR3Q13615 1198 aa3.5□□□□□ -1.85
CALD1-216ENST00000473714 DNAJC14Q6Y2X3 702 aaPredicted RBP3.5□□□□□ -1.85
CALD1-216ENST00000473714 CYFIP1Q7L576 1253 aa3.5□□□□□ -1.85
CALD1-216ENST00000473714 ASB11Q8WXH4 323 aa3.5□□□□□ -1.85
CALD1-216ENST00000473714 BORCS6Q96GS4 357 aa3.5□□□□□ -1.85
CALD1-216ENST00000473714 GSX1Q9H4S2 264 aaPredicted RBP3.5□□□□□ -1.85
CALD1-216ENST00000473714 MRS2Q9HD23 443 aa3.5□□□□□ -1.85
CALD1-216ENST00000473714 CD320Q9NPF0 282 aa3.5□□□□□ -1.85
CALD1-216ENST00000473714 SNX11Q9Y5W9 270 aa3.5□□□□□ -1.85
CALD1-216ENST00000473714 DHX29Q7Z478 1369 aaKnown RBP3.5□□□□□ -1.85
CALD1-216ENST00000473714 NEXMIFQ5QGS0 1516 aa3.49□□□□□ -1.85
CALD1-216ENST00000473714 RPRD2Q5VT52 1461 aaKnown RBP3.49□□□□□ -1.85
CALD1-216ENST00000473714 KIF3BO15066 747 aa3.49□□□□□ -1.85
CALD1-216ENST00000473714 CTSBP07858 339 aa3.49□□□□□ -1.85
CALD1-216ENST00000473714 TCF3P15923 654 aa3.49□□□□□ -1.85
CALD1-216ENST00000473714 CTCFP49711 727 aaPredicted RBP3.49□□□□□ -1.85
CALD1-216ENST00000473714 OXCT1P55809 520 aa3.49□□□□□ -1.85
CALD1-216ENST00000473714 TSNAXIP1Q2TAA8 658 aa3.49□□□□□ -1.85
CALD1-216ENST00000473714 GGNQ86UU5 652 aa3.49□□□□□ -1.85
CALD1-216ENST00000473714 SLC17A8Q8NDX2 589 aa3.49□□□□□ -1.85
CALD1-216ENST00000473714 ZKSCAN3Q9BRR0 538 aa3.49□□□□□ -1.85
CALD1-216ENST00000473714 NRSN2Q9GZP1 204 aa3.49□□□□□ -1.85
CALD1-216ENST00000473714 IRF2BPLQ9H1B7 796 aa3.49□□□□□ -1.85
CALD1-216ENST00000473714 DCP1AQ9NPI6 582 aaPredicted RBP3.49□□□□□ -1.85
CALD1-216ENST00000473714 STIM2Q9P246 746 aa3.49□□□□□ -1.85
CALD1-216ENST00000473714 PLAGL2Q9UPG8 496 aa3.49□□□□□ -1.85
CALD1-216ENST00000473714 SMG5Q9UPR3 1016 aaKnown RBP3.49□□□□□ -1.85
CALD1-216ENST00000473714 CDK11AQ9UQ88 783 aaPredicted RBP3.49□□□□□ -1.85
CALD1-216ENST00000473714 TBX22Q9Y458 520 aa3.49□□□□□ -1.85
CALD1-216ENST00000473714 ARHGEF28Q8N1W1 1705 aaKnown RBP3.49□□□□□ -1.85
CALD1-216ENST00000473714 PLCH1Q4KWH8 1693 aa3.49□□□□□ -1.85
CALD1-216ENST00000473714 CEP152O94986 1710 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 NWD2Q9ULI1 1742 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 PLSCR1O15162 318 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 MED14OSP0DP75 135 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 EDN3P14138 238 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 PCSK2P16519 638 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 BMP7P18075 431 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 MAPK8P45983 427 aa3.48□□□□□ -1.85
CALD1-216ENST00000473714 FGD1P98174 961 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms