RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 TRIM34Q9BYJ4 488 aa10.72□□□□□ -0.69
SMG5-203ENST00000473643 ARHGAP39Q9C0H5 1083 aa10.72□□□□□ -0.69
SMG5-203ENST00000473643 ALDH8A1Q9H2A2 487 aaPredicted RBP10.72□□□□□ -0.69
SMG5-203ENST00000473643 TCP11L1Q9NUJ3 509 aa10.72□□□□□ -0.69
SMG5-203ENST00000473643 ZSWIM5Q9P217 1185 aa10.72□□□□□ -0.69
SMG5-203ENST00000473643 AGTPBP1Q9UPW5 1226 aa10.72□□□□□ -0.69
SMG5-203ENST00000473643 CDK5RAP2Q96SN8 1893 aa10.72□□□□□ -0.69
SMG5-203ENST00000473643 B4E1Z4 1266 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 KDM4AO75164 1064 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 RPS6KB1P23443 525 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 CTGFP29279 349 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 BACE1P56817 501 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 TFAP4Q01664 338 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 COL9A3Q14050 684 aaPredicted RBP10.71□□□□□ -0.69
SMG5-203ENST00000473643 KIF22Q14807 665 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 SHROOM1Q2M3G4 852 aaPredicted RBP10.71□□□□□ -0.69
SMG5-203ENST00000473643 CERKLQ49MI3 558 aaPredicted RBP10.71□□□□□ -0.69
SMG5-203ENST00000473643 TREML2Q5T2D2 321 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 GADL1Q6ZQY3 521 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 CYB5R4Q7L1T6 521 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 STK11IPQ8N1F8 1099 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 NAV1Q8NEY1 1877 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 ANKS1AQ92625 1134 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 ARMC5Q96C12 935 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.71□□□□□ -0.69
SMG5-203ENST00000473643 AGXT2Q9BYV1 514 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 AS3MTQ9HBK9 375 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 ZBTB21Q9ULJ3 1066 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 CYP46A1Q9Y6A2 500 aa10.71□□□□□ -0.69
SMG5-203ENST00000473643 PLIN4Q96Q06 1357 aa10.7□□□□□ -0.7
SMG5-203ENST00000473643 IGKV6D-41A0A0C4DH26 115 aa10.7□□□□□ -0.7
SMG5-203ENST00000473643 C19orf81C9J6K1 198 aa10.7□□□□□ -0.7
SMG5-203ENST00000473643 RANBP6O60518 1105 aaKnown RBP10.7□□□□□ -0.7
SMG5-203ENST00000473643 CASTP20810 708 aaKnown RBP10.7□□□□□ -0.7
SMG5-203ENST00000473643 PSMC4P43686 418 aa10.7□□□□□ -0.7
SMG5-203ENST00000473643 HMGCS2P54868 508 aa10.7□□□□□ -0.7
SMG5-203ENST00000473643 PRMT2P55345 433 aa10.7□□□□□ -0.7
SMG5-203ENST00000473643 ANTXR2P58335 489 aa10.7□□□□□ -0.7
SMG5-203ENST00000473643 MLLT1Q03111 559 aaPredicted RBP10.7□□□□□ -0.7
SMG5-203ENST00000473643 CCDC178Q5BJE1 867 aa10.7□□□□□ -0.7
SMG5-203ENST00000473643 RRP12Q5JTH9 1297 aaKnown RBP10.7□□□□□ -0.7
SMG5-203ENST00000473643 IGDCC4Q8TDY8 1250 aa10.7□□□□□ -0.7
SMG5-203ENST00000473643 TMEM87BQ96K49 555 aa10.7□□□□□ -0.7
SMG5-203ENST00000473643 TRIM47Q96LD4 638 aa10.7□□□□□ -0.7
SMG5-203ENST00000473643 TTC14Q96N46 770 aa10.7□□□□□ -0.7
SMG5-203ENST00000473643 TOMM22Q9NS69 142 aa10.7□□□□□ -0.7
SMG5-203ENST00000473643 MKI67P46013 3256 aaKnown RBP10.7□□□□□ -0.7
SMG5-203ENST00000473643 MYH1P12882 1939 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 BAZ2AQ9UIF9 1905 aaKnown RBP10.69□□□□□ -0.7
SMG5-203ENST00000473643 TSPY2A6NKD2 308 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 USP17L10C9JJH3 530 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 PRC1O43663 620 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 GDF11O95390 407 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 GH2P01242 217 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 TSPY3P0CV98 308 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 TSPY8P0CW00 308 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 AKR1B1P15121 316 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 HOXA7P31268 230 aaPredicted RBP10.69□□□□□ -0.7
SMG5-203ENST00000473643 GUCY1A2P33402 732 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 LIFRP42702 1097 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 NEK4P51957 841 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 SOX10P56693 466 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 ABCB5Q2M3G0 1257 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 FAM47AQ5JRC9 791 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 TMEM179Q6ZVK1 233 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 IQCA1Q86XH1 822 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 DGKHQ86XP1 1220 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 ZSCAN10Q96SZ4 725 aaPredicted RBP10.69□□□□□ -0.7
SMG5-203ENST00000473643 UPF3BQ9BZI7 483 aaKnown RBP10.69□□□□□ -0.7
SMG5-203ENST00000473643 CABP5Q9NP86 173 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 IL17RBQ9NRM6 502 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 SRRDQ9UH36 339 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 PTCH2Q9Y6C5 1203 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 LAMA4Q16363 1823 aa10.69□□□□□ -0.7
SMG5-203ENST00000473643 SIPA1L1O43166 1804 aa10.68□□□□□ -0.7
SMG5-203ENST00000473643 SH2B2O14492 632 aaPredicted RBP10.68□□□□□ -0.7
SMG5-203ENST00000473643 CPA1P15085 419 aa10.68□□□□□ -0.7
SMG5-203ENST00000473643 HOXD10P28358 340 aa10.68□□□□□ -0.7
SMG5-203ENST00000473643 GCLCP48506 637 aaPredicted RBP10.68□□□□□ -0.7
SMG5-203ENST00000473643 EVCP57679 992 aa10.68□□□□□ -0.7
SMG5-203ENST00000473643 PABPC4Q13310 644 aaKnown RBP eCLIP10.68□□□□□ -0.7
SMG5-203ENST00000473643 MTMR2Q13614 643 aa10.68□□□□□ -0.7
SMG5-203ENST00000473643 SEC23AQ15436 765 aa10.68□□□□□ -0.7
SMG5-203ENST00000473643 PPP4R3BQ5MIZ7 849 aa10.68□□□□□ -0.7
SMG5-203ENST00000473643 RCSD1Q6JBY9 416 aa10.68□□□□□ -0.7
SMG5-203ENST00000473643 SGMS1Q86VZ5 419 aa10.68□□□□□ -0.7
SMG5-203ENST00000473643 TMTC2Q8N394 836 aa10.68□□□□□ -0.7
SMG5-203ENST00000473643 SMCR8Q8TEV9 937 aaPredicted RBP10.68□□□□□ -0.7
SMG5-203ENST00000473643 ZNF333Q96JL9 665 aa10.68□□□□□ -0.7
SMG5-203ENST00000473643 ASCC2Q9H1I8 757 aaPredicted RBP10.68□□□□□ -0.7
SMG5-203ENST00000473643 KANSL2Q9H9L4 492 aa10.68□□□□□ -0.7
SMG5-203ENST00000473643 TSHZ2Q9NRE2 1034 aa10.68□□□□□ -0.7
SMG5-203ENST00000473643 EMILIN3Q9NT22 766 aa10.68□□□□□ -0.7
SMG5-203ENST00000473643 PDRG1Q9NUG6 133 aa10.68□□□□□ -0.7
SMG5-203ENST00000473643 MTMR4Q9NYA4 1195 aa10.68□□□□□ -0.7
SMG5-203ENST00000473643 PNMA3Q9UL41 463 aa10.68□□□□□ -0.7
SMG5-203ENST00000473643 IFIT3O14879 490 aaKnown RBP10.67□□□□□ -0.7
SMG5-203ENST00000473643 FMNL1O95466 1100 aaPredicted RBP10.67□□□□□ -0.7
SMG5-203ENST00000473643 OSBPP22059 807 aa10.67□□□□□ -0.7
SMG5-203ENST00000473643 MCM2P49736 904 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms