RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 DDAH1O94760 285 aa17.16■□□□□ 0.34
LMNA-213ENST00000473598 SLURP2P0DP57 97 aa17.16■□□□□ 0.34
LMNA-213ENST00000473598 SYT1P21579 422 aa17.16■□□□□ 0.34
LMNA-213ENST00000473598 ADD1P35611 737 aaKnown RBP17.16■□□□□ 0.34
LMNA-213ENST00000473598 TNNI2P48788 182 aa17.16■□□□□ 0.34
LMNA-213ENST00000473598 ANGEL2Q5VTE6 544 aaKnown RBP17.16■□□□□ 0.34
LMNA-213ENST00000473598 TATDN1Q6P1N9 297 aa17.16■□□□□ 0.34
LMNA-213ENST00000473598 CCDC17Q96LX7 622 aa17.16■□□□□ 0.34
LMNA-213ENST00000473598 MYH4Q9Y623 1939 aa17.16■□□□□ 0.34
LMNA-213ENST00000473598 MYH6P13533 1939 aa17.15■□□□□ 0.34
LMNA-213ENST00000473598 FAM196BA6NMK8 535 aa17.15■□□□□ 0.34
LMNA-213ENST00000473598 CALM1P0DP23 149 aa17.15■□□□□ 0.34
LMNA-213ENST00000473598 CALM2P0DP24 149 aa17.15■□□□□ 0.34
LMNA-213ENST00000473598 CALM3P0DP25 149 aa17.15■□□□□ 0.34
LMNA-213ENST00000473598 AKR1B1P15121 316 aa17.15■□□□□ 0.34
LMNA-213ENST00000473598 TROAPQ12815 778 aa17.15■□□□□ 0.34
LMNA-213ENST00000473598 KLHL40Q2TBA0 621 aa17.15■□□□□ 0.34
LMNA-213ENST00000473598 FANCBQ8NB91 859 aa17.15■□□□□ 0.34
LMNA-213ENST00000473598 NUP133Q8WUM0 1156 aa17.15■□□□□ 0.34
LMNA-213ENST00000473598 DDX11Q96FC9 970 aa17.15■□□□□ 0.34
LMNA-213ENST00000473598 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.15■□□□□ 0.34
LMNA-213ENST00000473598 TMEM39BQ9GZU3 492 aa17.15■□□□□ 0.34
LMNA-213ENST00000473598 LMBRD1Q9NUN5 540 aa17.15■□□□□ 0.34
LMNA-213ENST00000473598 HERC5Q9UII4 1024 aaKnown RBP17.15■□□□□ 0.34
LMNA-213ENST00000473598 STX6O43752 255 aa17.14■□□□□ 0.34
LMNA-213ENST00000473598 PDCP20941 246 aa17.14■□□□□ 0.34
LMNA-213ENST00000473598 NOVP48745 357 aa17.14■□□□□ 0.34
LMNA-213ENST00000473598 FMR1Q06787 632 aaKnown RBP eCLIP17.14■□□□□ 0.341e-8■■■□□ 17.3
LMNA-213ENST00000473598 TNFAIP1Q13829 316 aa17.14■□□□□ 0.34
LMNA-213ENST00000473598 PPP2R5BQ15173 497 aa17.14■□□□□ 0.34
LMNA-213ENST00000473598 NTRK3Q16288 839 aa17.14■□□□□ 0.34
LMNA-213ENST00000473598 RTN1Q16799 776 aa17.14■□□□□ 0.34
LMNA-213ENST00000473598 LARP1BQ659C4 914 aaKnown RBP17.14■□□□□ 0.34
LMNA-213ENST00000473598 PAXIP1Q6ZW49 1069 aaPredicted RBP17.14■□□□□ 0.34
LMNA-213ENST00000473598 CEP95Q96GE4 821 aa17.14■□□□□ 0.34
LMNA-213ENST00000473598 ZNF830Q96NB3 372 aaPredicted RBP17.14■□□□□ 0.34
LMNA-213ENST00000473598 KAT14Q9H8E8 782 aa17.14■□□□□ 0.34
LMNA-213ENST00000473598 STX8Q9UNK0 236 aa17.14■□□□□ 0.34
LMNA-213ENST00000473598 POLR2AP24928 1970 aaKnown RBP17.14■□□□□ 0.33
LMNA-213ENST00000473598 IGKV6D-41A0A0C4DH26 115 aa17.14■□□□□ 0.33
LMNA-213ENST00000473598 CCDC196A0A1B0GTZ2 297 aa17.14■□□□□ 0.33
LMNA-213ENST00000473598 CDKL5O76039 1030 aa17.14■□□□□ 0.33
LMNA-213ENST00000473598 CHADLQ6NUI6 762 aa17.14■□□□□ 0.33
LMNA-213ENST00000473598 CPLX2Q6PUV4 134 aaKnown RBP17.14■□□□□ 0.33
LMNA-213ENST00000473598 FAM184AQ8NB25 1140 aa17.14■□□□□ 0.33
LMNA-213ENST00000473598 PGAP2Q9UHJ9 254 aa17.14■□□□□ 0.33
LMNA-213ENST00000473598 WDR33Q9C0J8 1336 aaKnown RBP17.13■□□□□ 0.33
LMNA-213ENST00000473598 FDPSP14324 419 aaKnown RBP17.13■□□□□ 0.33
LMNA-213ENST00000473598 CERKLQ49MI3 558 aaPredicted RBP17.13■□□□□ 0.33
LMNA-213ENST00000473598 TMEM47Q9BQJ4 181 aa17.13■□□□□ 0.33
LMNA-213ENST00000473598 GLIS2Q9BZE0 524 aaPredicted RBP17.13■□□□□ 0.33
LMNA-213ENST00000473598 KIF3AQ9Y496 699 aa17.13■□□□□ 0.33
LMNA-213ENST00000473598 RASA3Q14644 834 aa17.13■□□□□ 0.33
LMNA-213ENST00000473598 PNMA1Q8ND90 353 aa17.13■□□□□ 0.33
LMNA-213ENST00000473598 RBM46Q8TBY0 533 aaKnown RBP17.13■□□□□ 0.33
LMNA-213ENST00000473598 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■■■■■ 53.3
LMNA-213ENST00000473598 MTMR4Q9NYA4 1195 aa17.13■□□□□ 0.33
LMNA-213ENST00000473598 ZKSCAN5Q9Y2L8 839 aa17.13■□□□□ 0.33
LMNA-213ENST00000473598 DDX49Q9Y6V7 483 aaKnown RBP17.13■□□□□ 0.33
LMNA-213ENST00000473598 ADM5C9JUS6 153 aa17.12■□□□□ 0.33
LMNA-213ENST00000473598 TRAF5O00463 557 aa17.12■□□□□ 0.33
LMNA-213ENST00000473598 PPFIA3O75145 1194 aa17.12■□□□□ 0.33
LMNA-213ENST00000473598 ZC3H15Q8WU90 426 aaKnown RBP17.12■□□□□ 0.33
LMNA-213ENST00000473598 PDLIM2Q96JY6 352 aa17.12■□□□□ 0.33
LMNA-213ENST00000473598 RBM28Q9NW13 759 aaKnown RBP17.12■□□□□ 0.33
LMNA-213ENST00000473598 MPHOSPH10O00566 681 aaKnown RBP17.11■□□□□ 0.33
LMNA-213ENST00000473598 TBC1D12O60347 775 aa17.11■□□□□ 0.33
LMNA-213ENST00000473598 TOP1P11387 765 aaKnown RBP17.11■□□□□ 0.33
LMNA-213ENST00000473598 IFNAR1P17181 557 aa17.11■□□□□ 0.33
LMNA-213ENST00000473598 FOXD4L5Q5VV16 416 aaPredicted RBP17.11■□□□□ 0.33
LMNA-213ENST00000473598 CDAN1Q8IWY9 1227 aa17.11■□□□□ 0.33
LMNA-213ENST00000473598 SMC1BQ8NDV3 1235 aa17.11■□□□□ 0.33
LMNA-213ENST00000473598 FOXD4L4Q8WXT5 416 aaPredicted RBP17.11■□□□□ 0.33
LMNA-213ENST00000473598 MAP3K14Q99558 947 aa17.11■□□□□ 0.33
LMNA-213ENST00000473598 ZSCAN22P10073 491 aaPredicted RBP17.11■□□□□ 0.33
LMNA-213ENST00000473598 SLC20A2Q08357 652 aa17.11■□□□□ 0.33
LMNA-213ENST00000473598 USP48Q86UV5 1035 aa17.11■□□□□ 0.33
LMNA-213ENST00000473598 CTCFLQ8NI51 663 aaPredicted RBP17.11■□□□□ 0.33
LMNA-213ENST00000473598 DCPSQ96C86 337 aaKnown RBP17.11■□□□□ 0.33
LMNA-213ENST00000473598 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.11■□□□□ 0.33
LMNA-213ENST00000473598 ORC3Q9UBD5 711 aaPredicted RBP17.11■□□□□ 0.33
LMNA-213ENST00000473598 MTMR6Q9Y217 621 aa17.11■□□□□ 0.33
LMNA-213ENST00000473598 PRPF40AO75400 957 aaKnown RBP17.1■□□□□ 0.33
LMNA-213ENST00000473598 TTLL1O95922 423 aa17.1■□□□□ 0.33
LMNA-213ENST00000473598 ITGBL1O95965 494 aaPredicted RBP17.1■□□□□ 0.33
LMNA-213ENST00000473598 PRAMEF18Q5VWM3 479 aa17.1■□□□□ 0.33
LMNA-213ENST00000473598 KRT26Q7Z3Y9 468 aa17.1■□□□□ 0.33
LMNA-213ENST00000473598 MYRIPQ8NFW9 859 aa17.1■□□□□ 0.33
LMNA-213ENST00000473598 PHKBQ93100 1093 aa17.1■□□□□ 0.33
LMNA-213ENST00000473598 CHAMP1Q96JM3 812 aa17.1■□□□□ 0.33
LMNA-213ENST00000473598 TEPSINQ96N21 525 aa17.1■□□□□ 0.33
LMNA-213ENST00000473598 STK36Q9NRP7 1315 aa17.1■□□□□ 0.33
LMNA-213ENST00000473598 VPS37CA5D8V6 355 aaPredicted RBP17.09■□□□□ 0.33
LMNA-213ENST00000473598 CDK11BP21127 795 aaKnown RBP17.09■□□□□ 0.33
LMNA-213ENST00000473598 MAP3K10Q02779 954 aa17.09■□□□□ 0.33
LMNA-213ENST00000473598 ABCB5Q2M3G0 1257 aa17.09■□□□□ 0.33
LMNA-213ENST00000473598 TMEM179Q6ZVK1 233 aa17.09■□□□□ 0.33
LMNA-213ENST00000473598 NBPF11Q86T75 865 aa17.09■□□□□ 0.33
LMNA-213ENST00000473598 APOBEC3FQ8IUX4 373 aaKnown RBP17.09■□□□□ 0.33
LMNA-213ENST00000473598 ATAD5Q96QE3 1844 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms