RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 OLFML2BQ68BL8 750 aa16.32■□□□□ 0.2
CHD3-209ENST00000473376 GIMAP6Q6P9H5 292 aa16.32■□□□□ 0.2
CHD3-209ENST00000473376 SDR42E1Q8WUS8 393 aa16.32■□□□□ 0.2
CHD3-209ENST00000473376 MROH8Q9H579 483 aa16.32■□□□□ 0.2
CHD3-209ENST00000473376 SLC5A4Q9NY91 659 aa16.32■□□□□ 0.2
CHD3-209ENST00000473376 BTBD7Q9P203 1132 aa16.32■□□□□ 0.2
CHD3-209ENST00000473376 PEX10O60683 326 aa16.31■□□□□ 0.2
CHD3-209ENST00000473376 BOLA2Q9H3K6 86 aa16.31■□□□□ 0.2
CHD3-209ENST00000473376 KANSL2Q9H9L4 492 aa16.31■□□□□ 0.2
CHD3-209ENST00000473376 MPHOSPH10O00566 681 aaKnown RBP16.3■□□□□ 0.2
CHD3-209ENST00000473376 WDR46O15213 610 aaKnown RBP16.3■□□□□ 0.2
CHD3-209ENST00000473376 ATP2B2Q01814 1243 aa16.3■□□□□ 0.2
CHD3-209ENST00000473376 CCL14Q16627 93 aa16.3■□□□□ 0.2
CHD3-209ENST00000473376 C16orf86Q6ZW13 317 aa16.3■□□□□ 0.2
CHD3-209ENST00000473376 SPATC1LQ9H0A9 340 aa16.3■□□□□ 0.2
CHD3-209ENST00000473376 VCPKMTQ9H867 229 aa16.3■□□□□ 0.2
CHD3-209ENST00000473376 ARMT1Q9H993 441 aa16.3■□□□□ 0.2
CHD3-209ENST00000473376 ADAMTS5Q9UNA0 930 aa16.3■□□□□ 0.2
CHD3-209ENST00000473376 PFASO15067 1338 aa16.29■□□□□ 0.2
CHD3-209ENST00000473376 APBB1O00213 710 aa16.29■□□□□ 0.2
CHD3-209ENST00000473376 MBD4O95243 580 aa16.29■□□□□ 0.2
CHD3-209ENST00000473376 CCND3P30281 292 aaPredicted RBP16.29■□□□□ 0.2
CHD3-209ENST00000473376 DSG3P32926 999 aa16.29■□□□□ 0.2
CHD3-209ENST00000473376 CDK8P49336 464 aa16.29■□□□□ 0.2
CHD3-209ENST00000473376 ICA1Q05084 483 aa16.29■□□□□ 0.2
CHD3-209ENST00000473376 SBK1Q52WX2 424 aa16.29■□□□□ 0.2
CHD3-209ENST00000473376 SIAH1Q8IUQ4 282 aa16.29■□□□□ 0.2
CHD3-209ENST00000473376 MOV10L1Q9BXT6 1211 aaKnown RBP16.29■□□□□ 0.2
CHD3-209ENST00000473376 ECHDC1Q9NTX5 307 aa16.29■□□□□ 0.2
CHD3-209ENST00000473376 ARPP21Q9UBL0 812 aaPredicted RBP16.29■□□□□ 0.2
CHD3-209ENST00000473376 STAP2Q9UGK3 403 aa16.29■□□□□ 0.2
CHD3-209ENST00000473376 DDX20Q9UHI6 824 aaKnown RBP16.29■□□□□ 0.2
CHD3-209ENST00000473376 NRBP1Q9UHY1 535 aa16.29■□□□□ 0.2
CHD3-209ENST00000473376 USP17L12C9JPN9 530 aa16.28■□□□□ 0.2
CHD3-209ENST00000473376 USP17L21D6R901 530 aa16.28■□□□□ 0.2
CHD3-209ENST00000473376 SLC25A27O95847 323 aa16.28■□□□□ 0.2
CHD3-209ENST00000473376 ZFYP08048 801 aaPredicted RBP16.28■□□□□ 0.2
CHD3-209ENST00000473376 COPB2P35606 906 aa16.28■□□□□ 0.2
CHD3-209ENST00000473376 LRIT3Q3SXY7 679 aa16.28■□□□□ 0.2
CHD3-209ENST00000473376 DPP9Q86TI2 863 aa16.28■□□□□ 0.2
CHD3-209ENST00000473376 TANGO6Q9C0B7 1094 aa16.28■□□□□ 0.2
CHD3-209ENST00000473376 SYNPO2Q9UMS6 1093 aa16.28■□□□□ 0.2
CHD3-209ENST00000473376 NAV1Q8NEY1 1877 aa16.28■□□□□ 0.2
CHD3-209ENST00000473376 ZNF236Q9UL36 1845 aa16.28■□□□□ 0.2
CHD3-209ENST00000473376 DNM1LO00429 736 aa16.27■□□□□ 0.2
CHD3-209ENST00000473376 PRKAB2O43741 272 aa16.27■□□□□ 0.2
CHD3-209ENST00000473376 LRRFIP1Q32MZ4 808 aaKnown RBP16.27■□□□□ 0.2
CHD3-209ENST00000473376 WDR78Q5VTH9 848 aa16.27■□□□□ 0.2
CHD3-209ENST00000473376 C7orf61Q8IZ16 206 aa16.27■□□□□ 0.2
CHD3-209ENST00000473376 GPATCH3Q96I76 525 aa16.27■□□□□ 0.2
CHD3-209ENST00000473376 DCTPP1Q9H773 170 aa16.27■□□□□ 0.2
CHD3-209ENST00000473376 FLRT1Q9NZU1 646 aa16.27■□□□□ 0.2
CHD3-209ENST00000473376 CYP2D6P10635 497 aa16.26■□□□□ 0.19
CHD3-209ENST00000473376 CYBAP13498 195 aa16.26■□□□□ 0.19
CHD3-209ENST00000473376 AKR1B1P15121 316 aa16.26■□□□□ 0.19
CHD3-209ENST00000473376 GNAT2P19087 354 aa16.26■□□□□ 0.19
CHD3-209ENST00000473376 ERCC3P19447 782 aa16.26■□□□□ 0.19
CHD3-209ENST00000473376 ADORA2AP29274 412 aa16.26■□□□□ 0.19
CHD3-209ENST00000473376 CTR9Q6PD62 1173 aa16.26■□□□□ 0.19
CHD3-209ENST00000473376 KBTBD3Q8NAB2 608 aa16.26■□□□□ 0.19
CHD3-209ENST00000473376 SLC44A5Q8NCS7 719 aa16.26■□□□□ 0.19
CHD3-209ENST00000473376 ARRDC4Q8NCT1 418 aa16.26■□□□□ 0.19
CHD3-209ENST00000473376 NPLOC4Q8TAT6 608 aa16.26■□□□□ 0.19
CHD3-209ENST00000473376 DYNLL2Q96FJ2 89 aa16.26■□□□□ 0.19
CHD3-209ENST00000473376 STRBPQ96SI9 672 aaKnown RBP16.26■□□□□ 0.19
CHD3-209ENST00000473376 GOPCQ9HD26 462 aa16.26■□□□□ 0.19
CHD3-209ENST00000473376 DIS3Q9Y2L1 958 aaKnown RBP16.26■□□□□ 0.19
CHD3-209ENST00000473376 SLC4A4Q9Y6R1 1079 aa16.26■□□□□ 0.19
CHD3-209ENST00000473376 FLOT1O75955 427 aa16.25■□□□□ 0.19
CHD3-209ENST00000473376 PUS7LQ9H0K6 701 aaKnown RBP16.25■□□□□ 0.19
CHD3-209ENST00000473376 ZNF287Q9HBT7 754 aa16.25■□□□□ 0.19
CHD3-209ENST00000473376 SEPT4O43236 478 aa16.24■□□□□ 0.19
CHD3-209ENST00000473376 FCER1AP12319 257 aa16.24■□□□□ 0.19
CHD3-209ENST00000473376 EEF2P13639 858 aaKnown RBP16.24■□□□□ 0.19
CHD3-209ENST00000473376 EVX2Q03828 476 aa16.24■□□□□ 0.19
CHD3-209ENST00000473376 KIAA1755Q5JYT7 1200 aa16.24■□□□□ 0.19
CHD3-209ENST00000473376 C1orf53Q5VUE5 145 aa16.24■□□□□ 0.19
CHD3-209ENST00000473376 RIOX2Q8IUF8 465 aa16.24■□□□□ 0.19
CHD3-209ENST00000473376 TDHQ8IZJ6 230 aa16.24■□□□□ 0.19
CHD3-209ENST00000473376 APPBP2Q92624 585 aa16.24■□□□□ 0.19
CHD3-209ENST00000473376 NYAP2Q9P242 653 aa16.24■□□□□ 0.19
CHD3-209ENST00000473376 A0A0G2JMZ2 1700 aa16.24■□□□□ 0.19
CHD3-209ENST00000473376 ROBO3Q96MS0 1386 aa16.24■□□□□ 0.19
CHD3-209ENST00000473376 ALPK3Q96L96 1907 aa16.23■□□□□ 0.19
CHD3-209ENST00000473376 CYP2C19P33261 490 aa16.23■□□□□ 0.19
CHD3-209ENST00000473376 MAGEA10P43363 369 aaPredicted RBP16.23■□□□□ 0.19
CHD3-209ENST00000473376 LRRC26Q2I0M4 334 aa16.23■□□□□ 0.19
CHD3-209ENST00000473376 MSL3Q8N5Y2 521 aaKnown RBP16.23■□□□□ 0.19
CHD3-209ENST00000473376 RLFQ13129 1914 aa16.23■□□□□ 0.19
CHD3-209ENST00000473376 TTC41PQ6P2S7 1318 aa16.22■□□□□ 0.19
CHD3-209ENST00000473376 SZT2Q5T011 3432 aa16.22■□□□□ 0.19
CHD3-209ENST00000473376 GSG1L2A8MUP6 293 aa16.22■□□□□ 0.19
CHD3-209ENST00000473376 COBLO75128 1261 aa16.22■□□□□ 0.19
CHD3-209ENST00000473376 TMEM132BQ14DG7 1078 aa16.22■□□□□ 0.19
CHD3-209ENST00000473376 TRPV1Q8NER1 839 aa16.22■□□□□ 0.19
CHD3-209ENST00000473376 ATG4CQ96DT6 458 aa16.22■□□□□ 0.19
CHD3-209ENST00000473376 MAML3Q96JK9 1138 aa16.22■□□□□ 0.19
CHD3-209ENST00000473376 PPP1R9AQ9ULJ8 1098 aa16.22■□□□□ 0.19
CHD3-209ENST00000473376 ZMYND8Q9ULU4 1186 aaPredicted RBP16.22■□□□□ 0.19
CHD3-209ENST00000473376 VWA5AO00534 786 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms