RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 ZSWIM5Q9P217 1185 aa8.82□□□□□ -1
CCDC171-205ENST00000472806 HOOK1Q9UJC3 728 aaKnown RBP8.82□□□□□ -1
CCDC171-205ENST00000472806 CEP131Q9UPN4 1083 aa8.82□□□□□ -1
CCDC171-205ENST00000472806 CHD4Q14839 1912 aa8.82□□□□□ -1
CCDC171-205ENST00000472806 BECN2A8MW95 431 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 DTNBO60941 627 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 CMA1P23946 247 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 CDC25BP30305 580 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 RFC4P35249 363 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 GYG1P46976 350 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 GSTO1P78417 241 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 CTDSPL2Q05D32 466 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 MAP2K5Q13163 448 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 SLC39A14Q15043 492 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 CCDC178Q5BJE1 867 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 RRP12Q5JTH9 1297 aaKnown RBP8.81□□□□□ -1
CCDC171-205ENST00000472806 TRAPPC3LQ5T215 181 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 LCE2CQ5TA81 110 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 KRT40Q6A162 431 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 BICDL1Q6ZP65 573 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 AMOTL1Q8IY63 956 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 ENGASEQ8NFI3 743 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 CCDC34Q96HJ3 373 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 FAM84BQ96KN1 310 aaPredicted RBP8.81□□□□□ -1
CCDC171-205ENST00000472806 TIGD1Q96MW7 591 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 SDF4Q9BRK5 362 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 CBX8Q9HC52 389 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 ATP8A2Q9NTI2 1148 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 PCDHA7Q9UN72 937 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 LEMD3Q9Y2U8 911 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 BTAF1O14981 1849 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 DUOX1Q9NRD9 1551 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 A0A1B0GUL6 1792 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 MAST2Q6P0Q8 1798 aa8.81□□□□□ -1
CCDC171-205ENST00000472806 MINDY4BA8MYZ0 360 aa8.8□□□□□ -1
CCDC171-205ENST00000472806 WNT7AO00755 349 aa8.8□□□□□ -1
CCDC171-205ENST00000472806 CUTAO60888 179 aa8.8□□□□□ -1
CCDC171-205ENST00000472806 DXOO77932 396 aaKnown RBP8.8□□□□□ -1
CCDC171-205ENST00000472806 POLR3DP05423 398 aaPredicted RBP8.8□□□□□ -1
CCDC171-205ENST00000472806 U2AF2P26368 475 aaKnown RBP eCLIP8.8□□□□□ -1
CCDC171-205ENST00000472806 SKOR1P84550 965 aa8.8□□□□□ -1
CCDC171-205ENST00000472806 RILPL1Q5EBL4 403 aa8.8□□□□□ -1
CCDC171-205ENST00000472806 CATIPQ7Z7H3 387 aa8.8□□□□□ -1
CCDC171-205ENST00000472806 FMR1NBQ8N0W7 255 aaPredicted RBP8.8□□□□□ -1
CCDC171-205ENST00000472806 MIGA1Q8NAN2 632 aa8.8□□□□□ -1
CCDC171-205ENST00000472806 WDR66Q8TBY9 1149 aa8.8□□□□□ -1
CCDC171-205ENST00000472806 CELF1Q92879 486 aaKnown RBP8.8□□□□□ -1
CCDC171-205ENST00000472806 USB1Q9BQ65 265 aaKnown RBP8.8□□□□□ -1
CCDC171-205ENST00000472806 SLC26A6Q9BXS9 759 aa8.8□□□□□ -1
CCDC171-205ENST00000472806 RNF26Q9BY78 433 aaPredicted RBP8.8□□□□□ -1
CCDC171-205ENST00000472806 FOXP1Q9H334 677 aaPredicted RBP8.8□□□□□ -1
CCDC171-205ENST00000472806 BRMS1Q9HCU9 246 aa8.8□□□□□ -1
CCDC171-205ENST00000472806 ARPP21Q9UBL0 812 aaPredicted RBP8.8□□□□□ -1
CCDC171-205ENST00000472806 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.8□□□□□ -1
CCDC171-205ENST00000472806 MYO5AQ9Y4I1 1855 aaKnown RBP8.79□□□□□ -1
CCDC171-205ENST00000472806 SMTNL1A8MU46 457 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 PRKAB2O43741 272 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 ORC4O43929 436 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 NEMFO60524 1076 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 DDAH1O94760 285 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 BMP15O95972 392 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 LDHCP07864 332 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 SNRPBP14678 240 aaKnown RBP8.79□□□□□ -1
CCDC171-205ENST00000472806 CDC27P30260 824 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 RBM6P78332 1123 aaKnown RBP8.79□□□□□ -1
CCDC171-205ENST00000472806 ST5P78524 1137 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 PDE4BQ07343 736 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 SNW1Q13573 536 aaKnown RBP8.79□□□□□ -1
CCDC171-205ENST00000472806 GRAPQ13588 217 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 NTRK3Q16288 839 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 SBK1Q52WX2 424 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 IFIT1BQ5T764 474 aaKnown RBP8.79□□□□□ -1
CCDC171-205ENST00000472806 SARM1Q6SZW1 724 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 ZNF804AQ7Z570 1209 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 DRC7Q8IY82 874 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 ELOA2Q8IYF1 753 aaPredicted RBP8.79□□□□□ -1
CCDC171-205ENST00000472806 ZNF654Q8IZM8 581 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 CCDC24Q8N4L8 307 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 FANCBQ8NB91 859 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 GRAPLQ8TC17 118 aaPredicted RBP8.79□□□□□ -1
CCDC171-205ENST00000472806 PIBF1Q8WXW3 757 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 HPS1Q92902 700 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 GJD4Q96KN9 370 aaPredicted RBP8.79□□□□□ -1
CCDC171-205ENST00000472806 ZSCAN10Q96SZ4 725 aaPredicted RBP8.79□□□□□ -1
CCDC171-205ENST00000472806 BPIFA3Q9BQP9 254 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 RIOK1Q9BRS2 568 aaKnown RBP8.79□□□□□ -1
CCDC171-205ENST00000472806 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.79□□□□□ -1
CCDC171-205ENST00000472806 TRIM5Q9C035 493 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 GOLPH3LQ9H4A5 285 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 FAM13BQ9NYF5 915 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 TRPC5Q9UL62 973 aaPredicted RBP8.79□□□□□ -1
CCDC171-205ENST00000472806 CLIC4Q9Y696 253 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 MORC2Q9Y6X9 1032 aaPredicted RBP8.79□□□□□ -1
CCDC171-205ENST00000472806 LY75O60449 1722 aa8.79□□□□□ -1
CCDC171-205ENST00000472806 FAM237AA0A1B0GTK4 181 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 SNAP23O00161 211 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 MYO1BO43795 1136 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 BAG3O95817 575 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 MMP1P03956 469 aa8.78□□□□□ -1
CCDC171-205ENST00000472806 FGRP09769 529 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms