RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 TICAM2Q86XR7 235 aa23.16■■□□□ 1.3
COMMD1-208ENST00000472729 HELLSQ9NRZ9 838 aa23.16■■□□□ 1.3
COMMD1-208ENST00000472729 PHIPQ8WWQ0 1821 aa23.16■■□□□ 1.3
COMMD1-208ENST00000472729 SMIM22K7EJ46 135 aa23.15■■□□□ 1.3
COMMD1-208ENST00000472729 CYP2B6P20813 491 aa23.15■■□□□ 1.3
COMMD1-208ENST00000472729 Q3C1V9 767 aa23.15■■□□□ 1.3
COMMD1-208ENST00000472729 CLEC10AQ8IUN9 316 aa23.15■■□□□ 1.3
COMMD1-208ENST00000472729 EPB41L4AQ9HCS5 686 aaPredicted RBP23.15■■□□□ 1.3
COMMD1-208ENST00000472729 NAV1Q8NEY1 1877 aa23.15■■□□□ 1.3
COMMD1-208ENST00000472729 CDK5RAP2Q96SN8 1893 aa23.15■■□□□ 1.3
COMMD1-208ENST00000472729 WDR46O15213 610 aaKnown RBP23.14■■□□□ 1.29
COMMD1-208ENST00000472729 PEX10O60683 326 aa23.14■■□□□ 1.29
COMMD1-208ENST00000472729 HMGCRP04035 888 aa23.14■■□□□ 1.29
COMMD1-208ENST00000472729 GJB1P08034 283 aa23.14■■□□□ 1.29
COMMD1-208ENST00000472729 RGS2P41220 211 aa23.14■■□□□ 1.29
COMMD1-208ENST00000472729 GPR142Q7Z601 462 aa23.14■■□□□ 1.29
COMMD1-208ENST00000472729 TRMT44Q8IYL2 757 aaKnown RBP23.14■■□□□ 1.29
COMMD1-208ENST00000472729 MB21D1Q8N884 522 aa23.14■■□□□ 1.29
COMMD1-208ENST00000472729 ATAD5Q96QE3 1844 aa23.14■■□□□ 1.29
COMMD1-208ENST00000472729 SPDYE16A6NNV3 312 aaPredicted RBP23.13■■□□□ 1.29
COMMD1-208ENST00000472729 PRDM1O75626 825 aa23.13■■□□□ 1.29
COMMD1-208ENST00000472729 TSPY3P0CV98 308 aa23.13■■□□□ 1.29
COMMD1-208ENST00000472729 TSPY8P0CW00 308 aa23.13■■□□□ 1.29
COMMD1-208ENST00000472729 RASA1P20936 1047 aa23.13■■□□□ 1.29
COMMD1-208ENST00000472729 MFAP1P55081 439 aaKnown RBP23.13■■□□□ 1.29
COMMD1-208ENST00000472729 PPARAQ07869 468 aa23.13■■□□□ 1.29
COMMD1-208ENST00000472729 PLS1Q14651 629 aa23.13■■□□□ 1.29
COMMD1-208ENST00000472729 MCMDC2Q4G0Z9 681 aa23.13■■□□□ 1.29
COMMD1-208ENST00000472729 LBX2Q6XYB7 198 aa23.13■■□□□ 1.29
COMMD1-208ENST00000472729 PORCNQ9H237 461 aa23.13■■□□□ 1.29
COMMD1-208ENST00000472729 GJD2Q9UKL4 321 aa23.13■■□□□ 1.29
COMMD1-208ENST00000472729 LOC285556D6RIA3 1793 aa23.13■■□□□ 1.29
COMMD1-208ENST00000472729 IRX6P78412 446 aaPredicted RBP23.12■■□□□ 1.29
COMMD1-208ENST00000472729 CCDC129Q6ZRS4 1044 aa23.12■■□□□ 1.29
COMMD1-208ENST00000472729 SIAH1Q8IUQ4 282 aa23.12■■□□□ 1.29
COMMD1-208ENST00000472729 UNC93B1Q9H1C4 597 aa23.12■■□□□ 1.29
COMMD1-208ENST00000472729 ROBO3Q96MS0 1386 aa23.12■■□□□ 1.29
COMMD1-208ENST00000472729 TFRCP02786 760 aaKnown RBP23.11■■□□□ 1.29
COMMD1-208ENST00000472729 ZKSCAN1P17029 563 aaPredicted RBP23.11■■□□□ 1.29
COMMD1-208ENST00000472729 CAPN2P17655 700 aa23.11■■□□□ 1.29
COMMD1-208ENST00000472729 GJA8P48165 433 aa23.11■■□□□ 1.29
COMMD1-208ENST00000472729 PPP4R3BQ5MIZ7 849 aa23.11■■□□□ 1.29
COMMD1-208ENST00000472729 CLIP2Q9UDT6 1046 aa23.11■■□□□ 1.29
COMMD1-208ENST00000472729 CTDP1Q9Y5B0 961 aaPredicted RBP23.11■■□□□ 1.29
COMMD1-208ENST00000472729 XRCC5P13010 732 aaKnown RBP23.1■■□□□ 1.29
COMMD1-208ENST00000472729 PLEKHM2Q8IWE5 1019 aa23.1■■□□□ 1.29
COMMD1-208ENST00000472729 U2AF1L4Q8WU68 220 aaKnown RBP23.1■■□□□ 1.29
COMMD1-208ENST00000472729 HMX1Q9NP08 348 aaPredicted RBP23.1■■□□□ 1.29
COMMD1-208ENST00000472729 BTBD7Q9P203 1132 aa23.1■■□□□ 1.29
COMMD1-208ENST00000472729 NYAP2Q9P242 653 aa23.1■■□□□ 1.29
COMMD1-208ENST00000472729 DDX60LQ5H9U9 1706 aaKnown RBP23.1■■□□□ 1.29
COMMD1-208ENST00000472729 PTPRFP10586 1907 aa23.1■■□□□ 1.29
COMMD1-208ENST00000472729 HIP1O00291 1037 aa23.09■■□□□ 1.29
COMMD1-208ENST00000472729 CNMDO75829 334 aa23.09■■□□□ 1.29
COMMD1-208ENST00000472729 DSG3P32926 999 aa23.09■■□□□ 1.29
COMMD1-208ENST00000472729 DEFB118Q96PH6 123 aa23.09■■□□□ 1.29
COMMD1-208ENST00000472729 TOMM22Q9NS69 142 aa23.09■■□□□ 1.29
COMMD1-208ENST00000472729 DIAPH3Q9NSV4 1193 aa23.09■■□□□ 1.29
COMMD1-208ENST00000472729 ISY1Q9ULR0 285 aaKnown RBP23.09■■□□□ 1.29
COMMD1-208ENST00000472729 HTTP42858 3142 aa23.08■■□□□ 1.29
COMMD1-208ENST00000472729 SLC15A5A6NIM6 579 aa23.08■■□□□ 1.29
COMMD1-208ENST00000472729 SGPL1O95470 568 aa23.08■■□□□ 1.29
COMMD1-208ENST00000472729 TTLL1O95922 423 aa23.08■■□□□ 1.29
COMMD1-208ENST00000472729 TFAP4Q01664 338 aa23.08■■□□□ 1.29
COMMD1-208ENST00000472729 KIAA1755Q5JYT7 1200 aa23.08■■□□□ 1.29
COMMD1-208ENST00000472729 PRPF38BQ5VTL8 546 aaKnown RBP23.08■■□□□ 1.29
COMMD1-208ENST00000472729 FAM227BQ96M60 508 aa23.08■■□□□ 1.29
COMMD1-208ENST00000472729 APBA2Q99767 749 aa23.08■■□□□ 1.29
COMMD1-208ENST00000472729 SPATC1LQ9H0A9 340 aa23.08■■□□□ 1.29
COMMD1-208ENST00000472729 OSBPL3Q9H4L5 887 aa23.08■■□□□ 1.29
COMMD1-208ENST00000472729 SLC5A4Q9NY91 659 aa23.08■■□□□ 1.29
COMMD1-208ENST00000472729 RPTORQ8N122 1335 aa23.08■■□□□ 1.28
COMMD1-208ENST00000472729 TSPY2A6NKD2 308 aa23.07■■□□□ 1.28
COMMD1-208ENST00000472729 F5H6K3 240 aa23.07■■□□□ 1.28
COMMD1-208ENST00000472729 STRNO43815 780 aa23.07■■□□□ 1.28
COMMD1-208ENST00000472729 KLRC3Q07444 240 aa23.07■■□□□ 1.28
COMMD1-208ENST00000472729 MAP2K5Q13163 448 aa23.07■■□□□ 1.28
COMMD1-208ENST00000472729 NMIQ13287 307 aaPredicted RBP23.07■■□□□ 1.28
COMMD1-208ENST00000472729 FAM83BQ5T0W9 1011 aa23.07■■□□□ 1.28
COMMD1-208ENST00000472729 DPP9Q86TI2 863 aa23.07■■□□□ 1.28
COMMD1-208ENST00000472729 NCAPG2Q86XI2 1143 aa23.07■■□□□ 1.28
COMMD1-208ENST00000472729 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.07■■□□□ 1.28
COMMD1-208ENST00000472729 MROH8Q9H579 483 aa23.07■■□□□ 1.28
COMMD1-208ENST00000472729 ZSWIM8A7E2V4 1837 aa23.07■■□□□ 1.28
COMMD1-208ENST00000472729 SDSP20132 328 aa23.06■■□□□ 1.28
COMMD1-208ENST00000472729 PTPREP23469 700 aa23.06■■□□□ 1.28
COMMD1-208ENST00000472729 FAM47AQ5JRC9 791 aa23.06■■□□□ 1.28
COMMD1-208ENST00000472729 MORN1Q5T089 497 aa23.06■■□□□ 1.28
COMMD1-208ENST00000472729 MFSD14CQ5VZR4 134 aa23.06■■□□□ 1.28
COMMD1-208ENST00000472729 NEDD1Q8NHV4 660 aa23.06■■□□□ 1.28
COMMD1-208ENST00000472729 ATG4CQ96DT6 458 aa23.06■■□□□ 1.28
COMMD1-208ENST00000472729 CEP95Q96GE4 821 aa23.06■■□□□ 1.28
COMMD1-208ENST00000472729 MOV10L1Q9BXT6 1211 aaKnown RBP23.06■■□□□ 1.28
COMMD1-208ENST00000472729 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.06■■□□□ 1.28
COMMD1-208ENST00000472729 MTMR4Q9NYA4 1195 aa23.06■■□□□ 1.28
COMMD1-208ENST00000472729 A0A0D9SFI3 127 aa23.05■■□□□ 1.28
COMMD1-208ENST00000472729 RANBP6O60518 1105 aaKnown RBP23.05■■□□□ 1.28
COMMD1-208ENST00000472729 CTDSPL2Q05D32 466 aa23.05■■□□□ 1.28
COMMD1-208ENST00000472729 VPS53Q5VIR6 699 aa23.05■■□□□ 1.28
COMMD1-208ENST00000472729 POTEEQ6S8J3 1075 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms