RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 ZNF236Q9UL36 1845 aa17.04■□□□□ 0.32
SMURF1-203ENST00000472627 CDH23Q9H251 3354 aa17.04■□□□□ 0.32
SMURF1-203ENST00000472627 KIAA0355O15063 1070 aa17.03■□□□□ 0.32
SMURF1-203ENST00000472627 COG2Q14746 738 aa17.03■□□□□ 0.32
SMURF1-203ENST00000472627 ABRAQ8N0Z2 381 aa17.03■□□□□ 0.32
SMURF1-203ENST00000472627 MOV10L1Q9BXT6 1211 aaKnown RBP17.03■□□□□ 0.32
SMURF1-203ENST00000472627 TANGO6Q9C0B7 1094 aa17.03■□□□□ 0.32
SMURF1-203ENST00000472627 SPATC1LQ9H0A9 340 aa17.03■□□□□ 0.32
SMURF1-203ENST00000472627 XPNPEP3Q9NQH7 507 aa17.03■□□□□ 0.32
SMURF1-203ENST00000472627 TMEM39AQ9NV64 488 aa17.03■□□□□ 0.32
SMURF1-203ENST00000472627 PHF24Q9UPV7 400 aa17.03■□□□□ 0.32
SMURF1-203ENST00000472627 PQBP1O60828 265 aaKnown RBP17.02■□□□□ 0.32
SMURF1-203ENST00000472627 IGHA2P01877 340 aa17.02■□□□□ 0.32
SMURF1-203ENST00000472627 FAM47AQ5JRC9 791 aa17.02■□□□□ 0.32
SMURF1-203ENST00000472627 USP38Q8NB14 1042 aa17.02■□□□□ 0.32
SMURF1-203ENST00000472627 NOB1Q9ULX3 412 aaKnown RBP17.02■□□□□ 0.32
SMURF1-203ENST00000472627 FOCADQ5VW36 1801 aa17.01■□□□□ 0.31
SMURF1-203ENST00000472627 DCDC2CA8MYV0 355 aa17.01■□□□□ 0.31
SMURF1-203ENST00000472627 CT47B1P0C2W7 299 aaPredicted RBP17.01■□□□□ 0.31
SMURF1-203ENST00000472627 ERCC3P19447 782 aa17.01■□□□□ 0.31
SMURF1-203ENST00000472627 AKNAD1Q5T1N1 836 aa17.01■□□□□ 0.31
SMURF1-203ENST00000472627 CCDC129Q6ZRS4 1044 aa17.01■□□□□ 0.31
SMURF1-203ENST00000472627 NCAPG2Q86XI2 1143 aa17.01■□□□□ 0.31
SMURF1-203ENST00000472627 ASB2Q96Q27 587 aa17.01■□□□□ 0.31
SMURF1-203ENST00000472627 TSPYL2Q9H2G4 693 aaPredicted RBP17.01■□□□□ 0.31
SMURF1-203ENST00000472627 SNRKQ9NRH2 765 aa17.01■□□□□ 0.31
SMURF1-203ENST00000472627 FCER1AP12319 257 aa17■□□□□ 0.31
SMURF1-203ENST00000472627 CYP7A1P22680 504 aa17■□□□□ 0.31
SMURF1-203ENST00000472627 MRPS5P82675 430 aaKnown RBP17■□□□□ 0.31
SMURF1-203ENST00000472627 PLS1Q14651 629 aa17■□□□□ 0.31
SMURF1-203ENST00000472627 ADGRA1Q86SQ6 560 aa17■□□□□ 0.31
SMURF1-203ENST00000472627 ACER1Q8TDN7 264 aa17■□□□□ 0.31
SMURF1-203ENST00000472627 ADAMTS19Q8TE59 1207 aa17■□□□□ 0.31
SMURF1-203ENST00000472627 NUP133Q8WUM0 1156 aa17■□□□□ 0.31
SMURF1-203ENST00000472627 PPM1EQ8WY54 764 aa17■□□□□ 0.31
SMURF1-203ENST00000472627 UHRF1Q96T88 793 aaPredicted RBP17■□□□□ 0.31
SMURF1-203ENST00000472627 TMED8Q6PL24 325 aaPredicted RBP16.99■□□□□ 0.31
SMURF1-203ENST00000472627 SLC44A5Q8NCS7 719 aa16.99■□□□□ 0.31
SMURF1-203ENST00000472627 MAML3Q96JK9 1138 aa16.99■□□□□ 0.31
SMURF1-203ENST00000472627 TOX2Q96NM4 488 aa16.99■□□□□ 0.31
SMURF1-203ENST00000472627 GPR108Q9NPR9 543 aa16.99■□□□□ 0.31
SMURF1-203ENST00000472627 MROH7Q68CQ1 1323 aa16.98■□□□□ 0.31
SMURF1-203ENST00000472627 MUC3AQ02505 3323 aa16.98■□□□□ 0.31
SMURF1-203ENST00000472627 A0A1W2PQ45 241 aaPredicted RBP16.98■□□□□ 0.31
SMURF1-203ENST00000472627 A0A1W2PQY0 241 aa16.98■□□□□ 0.31
SMURF1-203ENST00000472627 COBLO75128 1261 aa16.98■□□□□ 0.31
SMURF1-203ENST00000472627 CYP2E1P05181 493 aaPredicted RBP16.98■□□□□ 0.31
SMURF1-203ENST00000472627 EPHB4P54760 987 aa16.98■□□□□ 0.31
SMURF1-203ENST00000472627 SLFN5Q08AF3 891 aa16.98■□□□□ 0.31
SMURF1-203ENST00000472627 PPIGQ13427 754 aaKnown RBP eCLIP16.98■□□□□ 0.31
SMURF1-203ENST00000472627 OS9Q13438 667 aaPredicted RBP16.98■□□□□ 0.31
SMURF1-203ENST00000472627 PRAMEF19Q5SWL8 479 aa16.98■□□□□ 0.31
SMURF1-203ENST00000472627 C1QTNF1Q9BXJ1 281 aa16.98■□□□□ 0.31
SMURF1-203ENST00000472627 SH2D4AQ9H788 454 aa16.98■□□□□ 0.31
SMURF1-203ENST00000472627 STARD7Q9NQZ5 370 aa16.98■□□□□ 0.31
SMURF1-203ENST00000472627 CDK5RAP2Q96SN8 1893 aa16.97■□□□□ 0.31
SMURF1-203ENST00000472627 MPHOSPH10O00566 681 aaKnown RBP16.97■□□□□ 0.31
SMURF1-203ENST00000472627 IDH1O75874 414 aaKnown RBP16.97■□□□□ 0.31
SMURF1-203ENST00000472627 SLC25A27O95847 323 aa16.97■□□□□ 0.31
SMURF1-203ENST00000472627 GNAI2P04899 355 aa16.97■□□□□ 0.31
SMURF1-203ENST00000472627 AKR1A1P14550 325 aa16.97■□□□□ 0.31
SMURF1-203ENST00000472627 ITGB8P26012 769 aa16.97■□□□□ 0.31
SMURF1-203ENST00000472627 DYNLL1P63167 89 aaKnown RBP16.97■□□□□ 0.31
SMURF1-203ENST00000472627 ANKRD33Q7Z3H0 272 aa16.97■□□□□ 0.31
SMURF1-203ENST00000472627 ZNF512BQ96KM6 892 aaPredicted RBP16.97■□□□□ 0.31
SMURF1-203ENST00000472627 TSEN34Q9BSV6 310 aaKnown RBP16.97■□□□□ 0.31
SMURF1-203ENST00000472627 MTIF3Q9H2K0 278 aaKnown RBP16.97■□□□□ 0.31
SMURF1-203ENST00000472627 CNPY2Q9Y2B0 182 aa16.97■□□□□ 0.31
SMURF1-203ENST00000472627 ROBO3Q96MS0 1386 aa16.97■□□□□ 0.31
SMURF1-203ENST00000472627 TIMP1P01033 207 aa16.96■□□□□ 0.31
SMURF1-203ENST00000472627 POLR3DP05423 398 aaPredicted RBP16.96■□□□□ 0.31
SMURF1-203ENST00000472627 MAP3K12Q12852 859 aa16.96■□□□□ 0.31
SMURF1-203ENST00000472627 KCTD2Q14681 263 aa16.96■□□□□ 0.31
SMURF1-203ENST00000472627 RAB30Q15771 203 aa16.96■□□□□ 0.31
SMURF1-203ENST00000472627 MIGA1Q8NAN2 632 aa16.96■□□□□ 0.31
SMURF1-203ENST00000472627 MMP19Q99542 508 aa16.96■□□□□ 0.31
SMURF1-203ENST00000472627 MSRAQ9UJ68 235 aa16.96■□□□□ 0.31
SMURF1-203ENST00000472627 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.96■□□□□ 0.31
SMURF1-203ENST00000472627 MOXD2PA6NHM9 499 aa16.95■□□□□ 0.3
SMURF1-203ENST00000472627 FLOT1O75955 427 aa16.95■□□□□ 0.3
SMURF1-203ENST00000472627 PGK1P00558 417 aa16.95■□□□□ 0.3
SMURF1-203ENST00000472627 TNNI3KQ59H18 835 aa16.95■□□□□ 0.3
SMURF1-203ENST00000472627 PSRC1Q6PGN9 363 aaPredicted RBP16.95■□□□□ 0.3
SMURF1-203ENST00000472627 TMEM199Q8N511 208 aa16.95■□□□□ 0.3
SMURF1-203ENST00000472627 ARHGAP45Q92619 1136 aa16.95■□□□□ 0.3
SMURF1-203ENST00000472627 TINF2Q9BSI4 451 aa16.95■□□□□ 0.3
SMURF1-203ENST00000472627 RAPGEFL1Q9UHV5 662 aa16.95■□□□□ 0.3
SMURF1-203ENST00000472627 DIS3Q9Y2L1 958 aaKnown RBP16.95■□□□□ 0.3
SMURF1-203ENST00000472627 FPGT-TNNI3KV9GXZ4 949 aa16.95■□□□□ 0.3
SMURF1-203ENST00000472627 MYH1P12882 1939 aa16.95■□□□□ 0.3
SMURF1-203ENST00000472627 IGFBP4P22692 258 aa16.94■□□□□ 0.3
SMURF1-203ENST00000472627 DSG3P32926 999 aa16.94■□□□□ 0.3
SMURF1-203ENST00000472627 SHMT1P34896 483 aa16.94■□□□□ 0.3
SMURF1-203ENST00000472627 COPB2P35606 906 aa16.94■□□□□ 0.3
SMURF1-203ENST00000472627 ZAP70P43403 619 aa16.94■□□□□ 0.3
SMURF1-203ENST00000472627 FAAP100Q0VG06 881 aa16.94■□□□□ 0.3
SMURF1-203ENST00000472627 SEPT2Q15019 361 aa16.94■□□□□ 0.3
SMURF1-203ENST00000472627 AAK1Q2M2I8 961 aa16.94■□□□□ 0.3
SMURF1-203ENST00000472627 MFSD5Q6N075 450 aa16.94■□□□□ 0.3
SMURF1-203ENST00000472627 GLT1D1Q96MS3 346 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms