RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 SIAH1Q8IUQ4 282 aa16.8■□□□□ 0.28
BRCA1-211ENST00000472490 ESR2Q92731 530 aa16.8■□□□□ 0.28
BRCA1-211ENST00000472490 CEP95Q96GE4 821 aa16.8■□□□□ 0.28
BRCA1-211ENST00000472490 ESYT1Q9BSJ8 1104 aa16.8■□□□□ 0.28
BRCA1-211ENST00000472490 ASCC2Q9H1I8 757 aaPredicted RBP16.8■□□□□ 0.28
BRCA1-211ENST00000472490 IL25Q9H293 177 aa16.8■□□□□ 0.28
BRCA1-211ENST00000472490 VCPKMTQ9H867 229 aa16.8■□□□□ 0.28
BRCA1-211ENST00000472490 CNNM2Q9H8M5 875 aa16.8■□□□□ 0.28
BRCA1-211ENST00000472490 ATAD5Q96QE3 1844 aa16.8■□□□□ 0.28
BRCA1-211ENST00000472490 IGKV6D-41A0A0C4DH26 115 aa16.79■□□□□ 0.28
BRCA1-211ENST00000472490 DGKZQ13574 1117 aa16.79■□□□□ 0.28
BRCA1-211ENST00000472490 PKN2Q16513 984 aaKnown RBP16.79■□□□□ 0.28
BRCA1-211ENST00000472490 CLIP2Q9UDT6 1046 aa16.79■□□□□ 0.28
BRCA1-211ENST00000472490 CPA4Q9UI42 421 aa16.79■□□□□ 0.28
BRCA1-211ENST00000472490 PHIPQ8WWQ0 1821 aa16.78■□□□□ 0.28
BRCA1-211ENST00000472490 WDR46O15213 610 aaKnown RBP16.78■□□□□ 0.28
BRCA1-211ENST00000472490 RAD21O60216 631 aa16.78■□□□□ 0.28
BRCA1-211ENST00000472490 ABCB7O75027 752 aa16.78■□□□□ 0.28
BRCA1-211ENST00000472490 GNRH1P01148 92 aa16.78■□□□□ 0.28
BRCA1-211ENST00000472490 LACTBP83111 547 aaPredicted RBP16.78■□□□□ 0.28
BRCA1-211ENST00000472490 TRDNQ13061 729 aa16.78■□□□□ 0.28
BRCA1-211ENST00000472490 CATSPERGQ6ZRH7 1159 aa16.78■□□□□ 0.28
BRCA1-211ENST00000472490 CTU1Q7Z7A3 348 aaKnown RBP16.78■□□□□ 0.28
BRCA1-211ENST00000472490 CLEC10AQ8IUN9 316 aa16.78■□□□□ 0.28
BRCA1-211ENST00000472490 MAP4K1Q92918 833 aa16.78■□□□□ 0.28
BRCA1-211ENST00000472490 MKL1Q969V6 931 aa16.78■□□□□ 0.28
BRCA1-211ENST00000472490 KRT23Q9C075 422 aa16.78■□□□□ 0.28
BRCA1-211ENST00000472490 RPAP3Q9H6T3 665 aaPredicted RBP16.78■□□□□ 0.28
BRCA1-211ENST00000472490 HOXC10Q9NYD6 342 aa16.78■□□□□ 0.28
BRCA1-211ENST00000472490 ADGRA2Q96PE1 1338 aa16.77■□□□□ 0.28
BRCA1-211ENST00000472490 MYCNP04198 464 aaPredicted RBP16.77■□□□□ 0.28
BRCA1-211ENST00000472490 HERVK_113P62684 666 aa16.77■□□□□ 0.28
BRCA1-211ENST00000472490 PTH1RQ03431 593 aa16.77■□□□□ 0.28
BRCA1-211ENST00000472490 FAM110CQ1W6H9 321 aa16.77■□□□□ 0.28
BRCA1-211ENST00000472490 CCDC178Q5BJE1 867 aa16.77■□□□□ 0.28
BRCA1-211ENST00000472490 IQCA1Q86XH1 822 aa16.77■□□□□ 0.28
BRCA1-211ENST00000472490 TBC1D10CQ8IV04 446 aa16.77■□□□□ 0.28
BRCA1-211ENST00000472490 TANGO6Q9C0B7 1094 aa16.77■□□□□ 0.28
BRCA1-211ENST00000472490 ANO2Q9NQ90 1003 aa16.77■□□□□ 0.28
BRCA1-211ENST00000472490 INCENPQ9NQS7 918 aa16.77■□□□□ 0.28
BRCA1-211ENST00000472490 TCP11L1Q9NUJ3 509 aa16.77■□□□□ 0.28
BRCA1-211ENST00000472490 STX8Q9UNK0 236 aa16.77■□□□□ 0.28
BRCA1-211ENST00000472490 F5H6K3 240 aa16.76■□□□□ 0.27
BRCA1-211ENST00000472490 BCRP11274 1271 aa16.76■□□□□ 0.27
BRCA1-211ENST00000472490 KLRC3Q07444 240 aa16.76■□□□□ 0.27
BRCA1-211ENST00000472490 COG2Q14746 738 aa16.76■□□□□ 0.27
BRCA1-211ENST00000472490 TNS4Q8IZW8 715 aa16.76■□□□□ 0.27
BRCA1-211ENST00000472490 SPICE1Q8N0Z3 855 aa16.76■□□□□ 0.27
BRCA1-211ENST00000472490 ANKRD13CQ8N6S4 541 aa16.76■□□□□ 0.27
BRCA1-211ENST00000472490 GMCL1P1Q8NEA9 526 aa16.76■□□□□ 0.27
BRCA1-211ENST00000472490 TTC14Q96N46 770 aa16.76■□□□□ 0.27
BRCA1-211ENST00000472490 P2RX7Q99572 595 aaKnown RBP16.76■□□□□ 0.27
BRCA1-211ENST00000472490 NBPF3Q9H094 633 aa16.76■□□□□ 0.27
BRCA1-211ENST00000472490 EFCC1Q9HA90 598 aa16.76■□□□□ 0.27
BRCA1-211ENST00000472490 LOC285556D6RIA3 1793 aa16.75■□□□□ 0.27
BRCA1-211ENST00000472490 HOXD10P28358 340 aa16.75■□□□□ 0.27
BRCA1-211ENST00000472490 FCGRTP55899 365 aa16.75■□□□□ 0.27
BRCA1-211ENST00000472490 RNF20Q5VTR2 975 aa16.75■□□□□ 0.27
BRCA1-211ENST00000472490 CD99L2Q8TCZ2 262 aa16.75■□□□□ 0.27
BRCA1-211ENST00000472490 TRIM17Q9Y577 477 aa16.75■□□□□ 0.27
BRCA1-211ENST00000472490 RBM8AQ9Y5S9 174 aaKnown RBP16.75■□□□□ 0.27
BRCA1-211ENST00000472490 MYPNQ86TC9 1320 aa16.74■□□□□ 0.27
BRCA1-211ENST00000472490 FLOT1O75955 427 aa16.74■□□□□ 0.27
BRCA1-211ENST00000472490 CYP21A2P08686 494 aa16.74■□□□□ 0.27
BRCA1-211ENST00000472490 LBX2Q6XYB7 198 aa16.74■□□□□ 0.27
BRCA1-211ENST00000472490 GPRC5AQ8NFJ5 357 aa16.74■□□□□ 0.27
BRCA1-211ENST00000472490 LSG1Q9H089 658 aaKnown RBP16.74■□□□□ 0.27
BRCA1-211ENST00000472490 IL17RBQ9NRM6 502 aa16.74■□□□□ 0.27
BRCA1-211ENST00000472490 MORF4L1Q9UBU8 362 aa16.74■□□□□ 0.27
BRCA1-211ENST00000472490 TACC3Q9Y6A5 838 aa16.74■□□□□ 0.27
BRCA1-211ENST00000472490 NEDD4P46934 1319 aa16.73■□□□□ 0.27
BRCA1-211ENST00000472490 B4E1Z4 1266 aa16.73■□□□□ 0.27
BRCA1-211ENST00000472490 KDM4AO75164 1064 aa16.73■□□□□ 0.27
BRCA1-211ENST00000472490 FMNL1O95466 1100 aaPredicted RBP16.73■□□□□ 0.27
BRCA1-211ENST00000472490 NDUFB10O96000 172 aa16.73■□□□□ 0.27
BRCA1-211ENST00000472490 TOP1P11387 765 aaKnown RBP16.73■□□□□ 0.27
BRCA1-211ENST00000472490 PSMC4P43686 418 aa16.73■□□□□ 0.27
BRCA1-211ENST00000472490 NOVP48745 357 aa16.73■□□□□ 0.27
BRCA1-211ENST00000472490 PRMT2P55345 433 aa16.73■□□□□ 0.27
BRCA1-211ENST00000472490 CCNA1P78396 465 aa16.73■□□□□ 0.27
BRCA1-211ENST00000472490 RALYLQ86SE5 291 aaKnown RBP16.73■□□□□ 0.27
BRCA1-211ENST00000472490 DGKHQ86XP1 1220 aa16.73■□□□□ 0.27
BRCA1-211ENST00000472490 CCAR1Q8IX12 1150 aaKnown RBP16.73■□□□□ 0.27
BRCA1-211ENST00000472490 LRRC47Q8N1G4 583 aaKnown RBP16.73■□□□□ 0.27
BRCA1-211ENST00000472490 MB21D1Q8N884 522 aa16.73■□□□□ 0.27
BRCA1-211ENST00000472490 UBAC1Q9BSL1 405 aa16.73■□□□□ 0.27
BRCA1-211ENST00000472490 RABGAP1Q9Y3P9 1069 aa16.73■□□□□ 0.27
BRCA1-211ENST00000472490 NMT2O60551 498 aa16.72■□□□□ 0.27
BRCA1-211ENST00000472490 REC8O95072 547 aa16.72■□□□□ 0.27
BRCA1-211ENST00000472490 KIAA1755Q5JYT7 1200 aa16.72■□□□□ 0.27
BRCA1-211ENST00000472490 FAM83BQ5T0W9 1011 aa16.72■□□□□ 0.27
BRCA1-211ENST00000472490 SLFN13Q68D06 897 aa16.72■□□□□ 0.27
BRCA1-211ENST00000472490 OTOP1Q7RTM1 612 aa16.72■□□□□ 0.27
BRCA1-211ENST00000472490 NCOA7Q8NI08 942 aa16.72■□□□□ 0.27
BRCA1-211ENST00000472490 GMCL1Q96IK5 515 aa16.72■□□□□ 0.27
BRCA1-211ENST00000472490 MCOLN1Q9GZU1 580 aa16.72■□□□□ 0.27
BRCA1-211ENST00000472490 ZSWIM5Q9P217 1185 aa16.72■□□□□ 0.27
BRCA1-211ENST00000472490 PTPRFP10586 1907 aa16.72■□□□□ 0.27
BRCA1-211ENST00000472490 MYH8P13535 1937 aa16.71■□□□□ 0.27
BRCA1-211ENST00000472490 SPDYE16A6NNV3 312 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms