RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 GUCY1A2P33402 732 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 DIXDC1Q155Q3 683 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 MYSM1Q5VVJ2 828 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 KRT40Q6A162 431 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 ZNF654Q8IZM8 581 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 TMTC2Q8N394 836 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 RGS22Q8NE09 1264 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 CRAMP1Q96RY5 1269 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 ATP8A2Q9NTI2 1148 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 MKRN1Q9UHC7 482 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 GGA1Q9UJY5 639 aa15.09■□□□□ 0.01
SCAMP4-207ENST00000472442 KIAA1551Q9HCM1 1747 aa15.08■□□□□ 0.01
SCAMP4-207ENST00000472442 TMEM232C9JQI7 657 aa15.08■□□□□ 0
SCAMP4-207ENST00000472442 IKBKBO14920 756 aa15.08■□□□□ 0
SCAMP4-207ENST00000472442 TMED8Q6PL24 325 aaPredicted RBP15.08■□□□□ 0
SCAMP4-207ENST00000472442 SYNE3Q6ZMZ3 975 aa15.08■□□□□ 0
SCAMP4-207ENST00000472442 CMTR1Q8N1G2 835 aaKnown RBP15.08■□□□□ 0
SCAMP4-207ENST00000472442 WDR24Q96S15 920 aa15.08■□□□□ 0
SCAMP4-207ENST00000472442 ZSCAN10Q96SZ4 725 aaPredicted RBP15.08■□□□□ 0
SCAMP4-207ENST00000472442 SLC26A6Q9BXS9 759 aa15.08■□□□□ 0
SCAMP4-207ENST00000472442 ANKRD31Q8N7Z5 1873 aa15.08■□□□□ 0
SCAMP4-207ENST00000472442 STK36Q9NRP7 1315 aa15.08■□□□□ 0
SCAMP4-207ENST00000472442 FMNL1O95466 1100 aaPredicted RBP15.08■□□□□ 0
SCAMP4-207ENST00000472442 PFKFB1P16118 471 aa15.08■□□□□ 0
SCAMP4-207ENST00000472442 PPP2R3AQ06190 1150 aa15.08■□□□□ 0
SCAMP4-207ENST00000472442 BRAPQ7Z569 592 aa15.08■□□□□ 0
SCAMP4-207ENST00000472442 GPR161Q8N6U8 529 aaKnown RBP15.08■□□□□ 0
SCAMP4-207ENST00000472442 TBC1D16Q8TBP0 767 aa15.08■□□□□ 0
SCAMP4-207ENST00000472442 ARFGAP3Q9NP61 516 aa15.08■□□□□ 0
SCAMP4-207ENST00000472442 PPP2R2CQ9Y2T4 447 aa15.08■□□□□ 0
SCAMP4-207ENST00000472442 ZSCAN12O43309 604 aa15.07■□□□□ 0
SCAMP4-207ENST00000472442 IL1R1P14778 569 aa15.07■□□□□ 0
SCAMP4-207ENST00000472442 GNG11P61952 73 aa15.07■□□□□ 0
SCAMP4-207ENST00000472442 RTN1Q16799 776 aa15.07■□□□□ 0
SCAMP4-207ENST00000472442 FANCBQ8NB91 859 aa15.07■□□□□ 0
SCAMP4-207ENST00000472442 LCMT1Q9UIC8 334 aa15.07■□□□□ 0
SCAMP4-207ENST00000472442 TAOK2Q9UL54 1235 aa15.07■□□□□ 0
SCAMP4-207ENST00000472442 MROH7-TTC4A0A0A0MT08 1334 aa15.07■□□□□ 0
SCAMP4-207ENST00000472442 LTBP1Q14766 1721 aa15.07■□□□□ 0
SCAMP4-207ENST00000472442 YEATS4O95619 227 aa15.07■□□□□ 0
SCAMP4-207ENST00000472442 TOP1P11387 765 aaKnown RBP15.07■□□□□ 0
SCAMP4-207ENST00000472442 CASQ1P31415 396 aa15.07■□□□□ 0
SCAMP4-207ENST00000472442 SBK1Q52WX2 424 aa15.07■□□□□ 0
SCAMP4-207ENST00000472442 POLR3EQ9NVU0 708 aa15.07■□□□□ 0
SCAMP4-207ENST00000472442 TRIM66O15016 1216 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 CBFA2T2O43439 604 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 USP17L8P0C7I0 530 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 PCP11498 1178 aaKnown RBP15.06■□□□□ 0
SCAMP4-207ENST00000472442 SSRP1Q08945 709 aaKnown RBP15.06■□□□□ 0
SCAMP4-207ENST00000472442 VSTM4Q8IW00 320 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 CCDC82Q8N4S0 544 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 SH3RF3Q8TEJ3 882 aaPredicted RBP15.06■□□□□ 0
SCAMP4-207ENST00000472442 NUP133Q8WUM0 1156 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 PARD6BQ9BYG5 372 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 RASSF4Q9H2L5 321 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 RCAN1P53805 252 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 TMEM139Q8IV31 216 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 C10orf67Q8IYJ2 551 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 CRACR2BQ8N4Y2 399 aaPredicted RBP15.06■□□□□ 0
SCAMP4-207ENST00000472442 FUT8Q9BYC5 575 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 ARPP21Q9UBL0 812 aaPredicted RBP15.06■□□□□ 0
SCAMP4-207ENST00000472442 MRFAP1Q9Y605 127 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 LAMB1P07942 1786 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 LRRC37AA6NMS7 1700 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 MYO1CO00159 1063 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 ORC4O43929 436 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 LMAN1P49257 510 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 MAP3K9P80192 1104 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 MYL5Q02045 173 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 SLC4A8Q2Y0W8 1093 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 NLGN1Q8N2Q7 840 aa15.06■□□□□ 0
SCAMP4-207ENST00000472442 NRXN2Q9P2S2 1712 aa15.05■□□□□ 0
SCAMP4-207ENST00000472442 ARHGAP6O43182 974 aa15.05■□□□□ 0
SCAMP4-207ENST00000472442 NMT2O60551 498 aa15.05■□□□□ 0
SCAMP4-207ENST00000472442 AXDND1Q5T1B0 1012 aaPredicted RBP15.05■□□□□ 0
SCAMP4-207ENST00000472442 RSRC2Q7L4I2 434 aaKnown RBP15.05■□□□□ 0
SCAMP4-207ENST00000472442 FCHSD1Q86WN1 690 aa15.05■□□□□ 0
SCAMP4-207ENST00000472442 MCM9Q9NXL9 1143 aa15.05■□□□□ 0
SCAMP4-207ENST00000472442 RSPH14Q9UHP6 348 aa15.05■□□□□ 0
SCAMP4-207ENST00000472442 H3BQF6 201 aa15.05■□□□□ -0
SCAMP4-207ENST00000472442 TNNT3P45378 269 aaPredicted RBP15.05■□□□□ -0
SCAMP4-207ENST00000472442 FAM47AQ5JRC9 791 aa15.05■□□□□ -0
SCAMP4-207ENST00000472442 OLFM4Q6UX06 510 aa15.05■□□□□ -0
SCAMP4-207ENST00000472442 ADAM21Q9UKJ8 722 aa15.05■□□□□ -0
SCAMP4-207ENST00000472442 SRGNP10124 158 aa15.04■□□□□ -0
SCAMP4-207ENST00000472442 MARCKSP29966 332 aaPredicted RBP15.04■□□□□ -0
SCAMP4-207ENST00000472442 PPP4CP60510 307 aa15.04■□□□□ -0
SCAMP4-207ENST00000472442 TROAPQ12815 778 aa15.04■□□□□ -0
SCAMP4-207ENST00000472442 IFIT1BQ5T764 474 aaKnown RBP15.04■□□□□ -0
SCAMP4-207ENST00000472442 SP8Q8IXZ3 490 aa15.04■□□□□ -0
SCAMP4-207ENST00000472442 RTFDC1Q9BY42 306 aaPredicted RBP15.04■□□□□ -0
SCAMP4-207ENST00000472442 PPEF1O14829 653 aaPredicted RBP15.04■□□□□ -0
SCAMP4-207ENST00000472442 WDHD1O75717 1129 aaPredicted RBP15.04■□□□□ -0
SCAMP4-207ENST00000472442 HSP90AA4PQ58FG1 418 aa15.04■□□□□ -0
SCAMP4-207ENST00000472442 IQCA1Q86XH1 822 aa15.04■□□□□ -0
SCAMP4-207ENST00000472442 ZFP91Q96JP5 570 aaPredicted RBP15.04■□□□□ -0
SCAMP4-207ENST00000472442 CWC15Q9P013 229 aaKnown RBP15.04■□□□□ -0
SCAMP4-207ENST00000472442 DLEC1Q9Y238 1755 aa15.04■□□□□ -0
SCAMP4-207ENST00000472442 GOLGB1Q14789 3259 aaKnown RBP15.03■□□□□ -0
SCAMP4-207ENST00000472442 CCDC196A0A1B0GTZ2 297 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms