RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 ATP13A1Q9HD20 1204 aa11.09□□□□□ -0.63
SGCE-210ENST00000472326 SEMA3GQ9NS98 782 aa11.09□□□□□ -0.63
SGCE-210ENST00000472326 ATF4P18848 351 aaPredicted RBP11.08□□□□□ -0.64
SGCE-210ENST00000472326 EIF6P56537 245 aaKnown RBP11.08□□□□□ -0.64
SGCE-210ENST00000472326 RBBP8NLQ8NC74 664 aaPredicted RBP11.08□□□□□ -0.64
SGCE-210ENST00000472326 CPLX3Q8WVH0 158 aa11.08□□□□□ -0.64
SGCE-210ENST00000472326 VWCEQ96DN2 955 aa11.08□□□□□ -0.64
SGCE-210ENST00000472326 SEC16BQ96JE7 1060 aa11.08□□□□□ -0.64
SGCE-210ENST00000472326 FBXL18Q96ME1 805 aa11.08□□□□□ -0.64
SGCE-210ENST00000472326 SLC6A18Q96N87 628 aa11.08□□□□□ -0.64
SGCE-210ENST00000472326 TINF2Q9BSI4 451 aa11.08□□□□□ -0.64
SGCE-210ENST00000472326 ZSWIM5Q9P217 1185 aa11.08□□□□□ -0.64
SGCE-210ENST00000472326 ZYXQ15942 572 aaKnown RBP11.07□□□□□ -0.64
SGCE-210ENST00000472326 ABI1Q8IZP0 508 aa11.07□□□□□ -0.64
SGCE-210ENST00000472326 ASB11Q8WXH4 323 aa11.07□□□□□ -0.64
SGCE-210ENST00000472326 UBE2FQ969M7 185 aa11.07□□□□□ -0.64
SGCE-210ENST00000472326 ASPNQ9BXN1 380 aa11.07□□□□□ -0.64
SGCE-210ENST00000472326 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.07□□□□□ -0.64
SGCE-210ENST00000472326 CLEC3AO75596 197 aa11.06□□□□□ -0.64
SGCE-210ENST00000472326 IKZF1Q13422 519 aa11.06□□□□□ -0.64
SGCE-210ENST00000472326 NBPF12Q5TAG4 269 aaPredicted RBP11.06□□□□□ -0.64
SGCE-210ENST00000472326 PIWIL2Q8TC59 973 aaKnown RBP11.06□□□□□ -0.64
SGCE-210ENST00000472326 TM9SF2Q99805 663 aa11.06□□□□□ -0.64
SGCE-210ENST00000472326 KCNH3Q9ULD8 1083 aa11.06□□□□□ -0.64
SGCE-210ENST00000472326 GIPRP48546 466 aa11.05□□□□□ -0.64
SGCE-210ENST00000472326 SHDQ96IW2 340 aa11.05□□□□□ -0.64
SGCE-210ENST00000472326 DUSP15Q9H1R2 295 aaPredicted RBP11.05□□□□□ -0.64
SGCE-210ENST00000472326 GUCY2CP25092 1073 aa11.04□□□□□ -0.64
SGCE-210ENST00000472326 CCNFP41002 786 aa11.04□□□□□ -0.64
SGCE-210ENST00000472326 GNL2Q13823 731 aaKnown RBP11.04□□□□□ -0.64
SGCE-210ENST00000472326 PLCL1Q15111 1095 aa11.04□□□□□ -0.64
SGCE-210ENST00000472326 INTS3Q68E01 1043 aaKnown RBP11.04□□□□□ -0.64
SGCE-210ENST00000472326 PRDM7Q9NQW5 492 aa11.04□□□□□ -0.64
SGCE-210ENST00000472326 SHISA3A0PJX4 238 aa11.03□□□□□ -0.64
SGCE-210ENST00000472326 RNF4P78317 190 aa11.03□□□□□ -0.64
SGCE-210ENST00000472326 SNW1Q13573 536 aaKnown RBP11.03□□□□□ -0.64
SGCE-210ENST00000472326 ANGEL2Q5VTE6 544 aaKnown RBP11.03□□□□□ -0.64
SGCE-210ENST00000472326 UNC5AQ6ZN44 842 aa11.03□□□□□ -0.64
SGCE-210ENST00000472326 VPS37DQ86XT2 251 aa11.03□□□□□ -0.64
SGCE-210ENST00000472326 ANAPC16Q96DE5 110 aa11.03□□□□□ -0.64
SGCE-210ENST00000472326 TDRD10Q5VZ19 366 aaKnown RBP11.02□□□□□ -0.65
SGCE-210ENST00000472326 THAP5Q7Z6K1 395 aa11.02□□□□□ -0.65
SGCE-210ENST00000472326 TAB3Q8N5C8 712 aaPredicted RBP11.02□□□□□ -0.65
SGCE-210ENST00000472326 FAM169BQ8N8A8 192 aa11.02□□□□□ -0.65
SGCE-210ENST00000472326 AGBL5Q8NDL9 886 aa11.02□□□□□ -0.65
SGCE-210ENST00000472326 MKRN2Q9H000 416 aaKnown RBP11.02□□□□□ -0.65
SGCE-210ENST00000472326 FAM86C1Q9NVL1 165 aa11.02□□□□□ -0.65
SGCE-210ENST00000472326 MRVI1Q9Y6F6 885 aa11.02□□□□□ -0.65
SGCE-210ENST00000472326 C9IYK1 514 aa11.01□□□□□ -0.65
SGCE-210ENST00000472326 FUT4P22083 530 aa11.01□□□□□ -0.65
SGCE-210ENST00000472326 DNAJA1P31689 397 aaKnown RBP11.01□□□□□ -0.65
SGCE-210ENST00000472326 ZP2Q05996 745 aa11.01□□□□□ -0.65
SGCE-210ENST00000472326 GPR62Q9BZJ7 368 aa11.01□□□□□ -0.65
SGCE-210ENST00000472326 CARS2Q9HA77 564 aaKnown RBP11.01□□□□□ -0.65
SGCE-210ENST00000472326 ADAMTS6Q9UKP5 1117 aa11.01□□□□□ -0.65
SGCE-210ENST00000472326 SRFP11831 508 aa11□□□□□ -0.65
SGCE-210ENST00000472326 TPP2P29144 1249 aaPredicted RBP11□□□□□ -0.65
SGCE-210ENST00000472326 NBPF9Q3BBW0 867 aa11□□□□□ -0.65
SGCE-210ENST00000472326 TMC3Q7Z5M5 1100 aa11□□□□□ -0.65
SGCE-210ENST00000472326 TTC6Q86TZ1 520 aa11□□□□□ -0.65
SGCE-210ENST00000472326 GPATCH2Q9NW75 528 aa11□□□□□ -0.65
SGCE-210ENST00000472326 SUCOQ9UBS9 1254 aaKnown RBP11□□□□□ -0.65
SGCE-210ENST00000472326 SSBP05455 408 aaKnown RBP eCLIP10.99□□□□□ -0.65
SGCE-210ENST00000472326 ARID5AQ03989 594 aa10.99□□□□□ -0.65
SGCE-210ENST00000472326 PPP2R5EQ16537 467 aa10.99□□□□□ -0.65
SGCE-210ENST00000472326 PPFIBP1Q86W92 1011 aa10.99□□□□□ -0.65
SGCE-210ENST00000472326 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.99□□□□□ -0.65
SGCE-210ENST00000472326 TRIT1Q9H3H1 467 aaKnown RBP10.99□□□□□ -0.65
SGCE-210ENST00000472326 STRIP2Q9ULQ0 834 aa10.99□□□□□ -0.65
SGCE-210ENST00000472326 LTBP3Q9NS15 1303 aa10.99□□□□□ -0.65
SGCE-210ENST00000472326 A0A1W2PQH9 124 aa10.98□□□□□ -0.65
SGCE-210ENST00000472326 ZNF792Q3KQV3 632 aa10.98□□□□□ -0.65
SGCE-210ENST00000472326 CREG2Q8IUH2 290 aa10.98□□□□□ -0.65
SGCE-210ENST00000472326 OR6P1Q8NGX9 317 aa10.98□□□□□ -0.65
SGCE-210ENST00000472326 PI4K2BQ8TCG2 481 aa10.98□□□□□ -0.65
SGCE-210ENST00000472326 DHRS1Q96LJ7 313 aa10.98□□□□□ -0.65
SGCE-210ENST00000472326 PRDM14Q9GZV8 571 aa10.98□□□□□ -0.65
SGCE-210ENST00000472326 ESR1P03372 595 aa10.97□□□□□ -0.65
SGCE-210ENST00000472326 TP53P04637 393 aaPredicted RBP10.97□□□□□ -0.65
SGCE-210ENST00000472326 PMS1P54277 932 aaKnown RBP10.97□□□□□ -0.65
SGCE-210ENST00000472326 NMIQ13287 307 aaPredicted RBP10.97□□□□□ -0.65
SGCE-210ENST00000472326 CLEC16AQ2KHT3 1053 aa10.97□□□□□ -0.65
SGCE-210ENST00000472326 TSPYL5Q86VY4 417 aaPredicted RBP10.97□□□□□ -0.65
SGCE-210ENST00000472326 CCDC144CPQ8IYA2 1237 aa10.97□□□□□ -0.65
SGCE-210ENST00000472326 MBNL3Q9NUK0 354 aaKnown RBP10.97□□□□□ -0.65
SGCE-210ENST00000472326 ADGRE2Q9UHX3 823 aa10.97□□□□□ -0.65
SGCE-210ENST00000472326 PCDHB10Q9UN67 800 aa10.97□□□□□ -0.65
SGCE-210ENST00000472326 MINPP1Q9UNW1 487 aa10.97□□□□□ -0.65
SGCE-210ENST00000472326 RNASE1P07998 156 aaKnown RBP10.96□□□□□ -0.65
SGCE-210ENST00000472326 FGRP09769 529 aa10.96□□□□□ -0.65
SGCE-210ENST00000472326 GAB4Q2WGN9 574 aa10.96□□□□□ -0.65
SGCE-210ENST00000472326 NAALADL2Q58DX5 795 aa10.96□□□□□ -0.65
SGCE-210ENST00000472326 MCF2L2Q86YR7 1114 aa10.96□□□□□ -0.65
SGCE-210ENST00000472326 ASCC2Q9H1I8 757 aaPredicted RBP10.96□□□□□ -0.65
SGCE-210ENST00000472326 DUSP13Q9UII6 198 aa10.96□□□□□ -0.65
SGCE-210ENST00000472326 FBXL21Q9UKT6 434 aa10.96□□□□□ -0.65
SGCE-210ENST00000472326 ZC3H6P61129 1189 aaKnown RBP10.95□□□□□ -0.66
SGCE-210ENST00000472326 DCAF15Q66K64 600 aa10.95□□□□□ -0.66
SGCE-210ENST00000472326 ETFBP38117 255 aa10.94□□□□□ -0.66
SGCE-210ENST00000472326 AUHQ13825 339 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms