RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 TTC22Q5TAA0 569 aa14.17□□□□□ -0.14
CLRN1-205ENST00000472224 CENPQQ7L2Z9 268 aaPredicted RBP14.17□□□□□ -0.14
CLRN1-205ENST00000472224 PLCD3Q8N3E9 789 aa14.17□□□□□ -0.14
CLRN1-205ENST00000472224 HELLSQ9NRZ9 838 aa14.17□□□□□ -0.14
CLRN1-205ENST00000472224 GINM1Q9NU53 330 aa14.17□□□□□ -0.14
CLRN1-205ENST00000472224 TMOD4Q9NZQ9 345 aa14.17□□□□□ -0.14
CLRN1-205ENST00000472224 BIN2Q9UBW5 565 aaPredicted RBP14.17□□□□□ -0.14
CLRN1-205ENST00000472224 PATL2C9JE40 543 aaKnown RBP14.16□□□□□ -0.14
CLRN1-205ENST00000472224 GSPT1P15170 499 aaKnown RBP14.16□□□□□ -0.14
CLRN1-205ENST00000472224 SDSP20132 328 aa14.16□□□□□ -0.14
CLRN1-205ENST00000472224 CDK8P49336 464 aa14.16□□□□□ -0.14
CLRN1-205ENST00000472224 MCMDC2Q4G0Z9 681 aa14.16□□□□□ -0.14
CLRN1-205ENST00000472224 GPAT2Q6NUI2 795 aa14.16□□□□□ -0.14
CLRN1-205ENST00000472224 GIMAP6Q6P9H5 292 aa14.16□□□□□ -0.14
CLRN1-205ENST00000472224 C16orf86Q6ZW13 317 aa14.16□□□□□ -0.14
CLRN1-205ENST00000472224 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.16□□□□□ -0.14
CLRN1-205ENST00000472224 IFNL3Q8IZI9 196 aa14.16□□□□□ -0.14
CLRN1-205ENST00000472224 CCDC136Q96JN2 1154 aa14.16□□□□□ -0.14
CLRN1-205ENST00000472224 PARK7Q99497 189 aaKnown RBP14.16□□□□□ -0.14
CLRN1-205ENST00000472224 GABRQQ9UN88 632 aa14.16□□□□□ -0.14
CLRN1-205ENST00000472224 MYH4Q9Y623 1939 aa14.15□□□□□ -0.14
CLRN1-205ENST00000472224 USP17L10C9JJH3 530 aa14.15□□□□□ -0.14
CLRN1-205ENST00000472224 CYP2C8P10632 490 aa14.15□□□□□ -0.14
CLRN1-205ENST00000472224 AKR1B1P15121 316 aa14.15□□□□□ -0.14
CLRN1-205ENST00000472224 HOXD10P28358 340 aa14.15□□□□□ -0.14
CLRN1-205ENST00000472224 UBXN2AP68543 259 aa14.15□□□□□ -0.14
CLRN1-205ENST00000472224 SEPT2Q15019 361 aa14.15□□□□□ -0.14
CLRN1-205ENST00000472224 LRIT3Q3SXY7 679 aa14.15□□□□□ -0.14
CLRN1-205ENST00000472224 SBK1Q52WX2 424 aa14.15□□□□□ -0.14
CLRN1-205ENST00000472224 TREML2Q5T2D2 321 aa14.15□□□□□ -0.14
CLRN1-205ENST00000472224 VPS53Q5VIR6 699 aa14.15□□□□□ -0.14
CLRN1-205ENST00000472224 CWC27Q6UX04 472 aaKnown RBP14.15□□□□□ -0.14
CLRN1-205ENST00000472224 ZNF589Q86UQ0 364 aaPredicted RBP14.15□□□□□ -0.14
CLRN1-205ENST00000472224 DIS3LQ8TF46 1054 aaKnown RBP14.15□□□□□ -0.14
CLRN1-205ENST00000472224 WDR18Q9BV38 432 aa14.15□□□□□ -0.14
CLRN1-205ENST00000472224 MKNK2Q9HBH9 465 aa14.15□□□□□ -0.14
CLRN1-205ENST00000472224 AGTPBP1Q9UPW5 1226 aa14.15□□□□□ -0.14
CLRN1-205ENST00000472224 CCDC171Q6TFL3 1326 aa14.15□□□□□ -0.15
CLRN1-205ENST00000472224 MUC3AQ02505 3323 aa14.14□□□□□ -0.15
CLRN1-205ENST00000472224 ROBO3Q96MS0 1386 aa14.14□□□□□ -0.15
CLRN1-205ENST00000472224 LAMA4Q16363 1823 aa14.14□□□□□ -0.15
CLRN1-205ENST00000472224 HIP1O00291 1037 aa14.14□□□□□ -0.15
CLRN1-205ENST00000472224 BACE1P56817 501 aa14.14□□□□□ -0.15
CLRN1-205ENST00000472224 TMEM179Q6ZVK1 233 aa14.14□□□□□ -0.15
CLRN1-205ENST00000472224 SKAP1Q86WV1 359 aa14.14□□□□□ -0.15
CLRN1-205ENST00000472224 CLEC10AQ8IUN9 316 aa14.14□□□□□ -0.15
CLRN1-205ENST00000472224 PROCA1Q8NCQ7 364 aaPredicted RBP14.14□□□□□ -0.15
CLRN1-205ENST00000472224 SLAIN1Q8ND83 568 aa14.14□□□□□ -0.15
CLRN1-205ENST00000472224 SMCR8Q8TEV9 937 aaPredicted RBP14.14□□□□□ -0.15
CLRN1-205ENST00000472224 GREB1LQ9C091 1923 aaPredicted RBP14.13□□□□□ -0.15
CLRN1-205ENST00000472224 PRDM1O75626 825 aa14.13□□□□□ -0.15
CLRN1-205ENST00000472224 ELNP15502 786 aa14.13□□□□□ -0.15
CLRN1-205ENST00000472224 GUCY1A2P33402 732 aa14.13□□□□□ -0.15
CLRN1-205ENST00000472224 ATP2B2Q01814 1243 aa14.13□□□□□ -0.15
CLRN1-205ENST00000472224 ICA1Q05084 483 aa14.13□□□□□ -0.15
CLRN1-205ENST00000472224 USP17L2Q6R6M4 530 aa14.13□□□□□ -0.15
CLRN1-205ENST00000472224 C7orf61Q8IZ16 206 aa14.13□□□□□ -0.15
CLRN1-205ENST00000472224 ACER1Q8TDN7 264 aa14.13□□□□□ -0.15
CLRN1-205ENST00000472224 PAWRQ96IZ0 340 aaKnown RBP14.13□□□□□ -0.15
CLRN1-205ENST00000472224 DEFB118Q96PH6 123 aa14.13□□□□□ -0.15
CLRN1-205ENST00000472224 CRISPLD2Q9H0B8 497 aa14.13□□□□□ -0.15
CLRN1-205ENST00000472224 PNMA3Q9UL41 463 aa14.13□□□□□ -0.15
CLRN1-205ENST00000472224 ZMYND8Q9ULU4 1186 aaPredicted RBP14.13□□□□□ -0.15
CLRN1-205ENST00000472224 C19orf81C9J6K1 198 aa14.12□□□□□ -0.15
CLRN1-205ENST00000472224 FOXP2O15409 715 aa14.12□□□□□ -0.15
CLRN1-205ENST00000472224 TFRCP02786 760 aaKnown RBP14.12□□□□□ -0.15
CLRN1-205ENST00000472224 INHAP05111 366 aa14.12□□□□□ -0.15
CLRN1-205ENST00000472224 SLC3A2P08195 630 aaKnown RBP14.12□□□□□ -0.15
CLRN1-205ENST00000472224 BCRP11274 1271 aa14.12□□□□□ -0.15
CLRN1-205ENST00000472224 PRKAR2AP13861 404 aaKnown RBP14.12□□□□□ -0.15
CLRN1-205ENST00000472224 MFAP1P55081 439 aaKnown RBP14.12□□□□□ -0.15
CLRN1-205ENST00000472224 IRX3P78415 501 aaPredicted RBP14.12□□□□□ -0.15
CLRN1-205ENST00000472224 PPARAQ07869 468 aa14.12□□□□□ -0.15
CLRN1-205ENST00000472224 PABPC4Q13310 644 aaKnown RBP eCLIP14.12□□□□□ -0.15
CLRN1-205ENST00000472224 TICAM2Q86XR7 235 aa14.12□□□□□ -0.15
CLRN1-205ENST00000472224 CCDC17Q96LX7 622 aa14.12□□□□□ -0.15
CLRN1-205ENST00000472224 ARHGEF10LQ9HCE6 1279 aa14.12□□□□□ -0.15
CLRN1-205ENST00000472224 PAK6Q9NQU5 681 aaPredicted RBP14.12□□□□□ -0.15
CLRN1-205ENST00000472224 TAOK2Q9UL54 1235 aa14.12□□□□□ -0.15
CLRN1-205ENST00000472224 SLC45A1Q9Y2W3 748 aa14.12□□□□□ -0.15
CLRN1-205ENST00000472224 RAD21O60216 631 aa14.11□□□□□ -0.15
CLRN1-205ENST00000472224 ADCY3O60266 1144 aa14.11□□□□□ -0.15
CLRN1-205ENST00000472224 HSPD1P10809 573 aaKnown RBP14.11□□□□□ -0.15
CLRN1-205ENST00000472224 MAGEA10P43363 369 aaPredicted RBP14.11□□□□□ -0.15
CLRN1-205ENST00000472224 FCGRTP55899 365 aa14.11□□□□□ -0.15
CLRN1-205ENST00000472224 CTDSPL2Q05D32 466 aa14.11□□□□□ -0.15
CLRN1-205ENST00000472224 SH3D19Q5HYK7 790 aa14.11□□□□□ -0.15
CLRN1-205ENST00000472224 TDHQ8IZJ6 230 aa14.11□□□□□ -0.15
CLRN1-205ENST00000472224 ZNF287Q9HBT7 754 aa14.11□□□□□ -0.15
CLRN1-205ENST00000472224 CDH23Q9H251 3354 aa14.11□□□□□ -0.15
CLRN1-205ENST00000472224 SYN1P17600 705 aa14.1□□□□□ -0.15
CLRN1-205ENST00000472224 RASA1P20936 1047 aa14.1□□□□□ -0.15
CLRN1-205ENST00000472224 USP14P54578 494 aa14.1□□□□□ -0.15
CLRN1-205ENST00000472224 HAND2P61296 217 aa14.1□□□□□ -0.15
CLRN1-205ENST00000472224 PDE4BQ07343 736 aa14.1□□□□□ -0.15
CLRN1-205ENST00000472224 ZNF444Q8N0Y2 327 aaPredicted RBP14.1□□□□□ -0.15
CLRN1-205ENST00000472224 GUCD1Q96NT3 240 aa14.1□□□□□ -0.15
CLRN1-205ENST00000472224 ASCC2Q9H1I8 757 aaPredicted RBP14.1□□□□□ -0.15
CLRN1-205ENST00000472224 PRDM6Q9NQX0 595 aa14.1□□□□□ -0.15
CLRN1-205ENST00000472224 TOMM22Q9NS69 142 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms