RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 GABRQQ9UN88 632 aa10.89□□□□□ -0.67
SYN3-211ENST00000472027 MYPNQ86TC9 1320 aa10.88□□□□□ -0.67
SYN3-211ENST00000472027 IGKV6D-41A0A0C4DH26 115 aa10.88□□□□□ -0.67
SYN3-211ENST00000472027 TFAP4Q01664 338 aa10.88□□□□□ -0.67
SYN3-211ENST00000472027 PRKCZQ05513 592 aa10.88□□□□□ -0.67
SYN3-211ENST00000472027 COG2Q14746 738 aa10.88□□□□□ -0.67
SYN3-211ENST00000472027 SLC9C1Q4G0N8 1177 aa10.88□□□□□ -0.67
SYN3-211ENST00000472027 NBPF11Q86T75 865 aa10.88□□□□□ -0.67
SYN3-211ENST00000472027 SPICE1Q8N0Z3 855 aa10.88□□□□□ -0.67
SYN3-211ENST00000472027 NEDD1Q8NHV4 660 aa10.88□□□□□ -0.67
SYN3-211ENST00000472027 RAET1EQ8TD07 263 aa10.88□□□□□ -0.67
SYN3-211ENST00000472027 COA7Q96BR5 231 aa10.88□□□□□ -0.67
SYN3-211ENST00000472027 ARMC5Q96C12 935 aa10.88□□□□□ -0.67
SYN3-211ENST00000472027 PAGR1Q9BTK6 254 aa10.88□□□□□ -0.67
SYN3-211ENST00000472027 HOXC10Q9NYD6 342 aa10.88□□□□□ -0.67
SYN3-211ENST00000472027 NYAP2Q9P242 653 aa10.88□□□□□ -0.67
SYN3-211ENST00000472027 CLIP2Q9UDT6 1046 aa10.88□□□□□ -0.67
SYN3-211ENST00000472027 TACC3Q9Y6A5 838 aa10.88□□□□□ -0.67
SYN3-211ENST00000472027 ZSWIM8A7E2V4 1837 aa10.87□□□□□ -0.67
SYN3-211ENST00000472027 CNMDO75829 334 aa10.87□□□□□ -0.67
SYN3-211ENST00000472027 TSPY3P0CV98 308 aa10.87□□□□□ -0.67
SYN3-211ENST00000472027 TSPY8P0CW00 308 aa10.87□□□□□ -0.67
SYN3-211ENST00000472027 FLT3LGP49771 235 aa10.87□□□□□ -0.67
SYN3-211ENST00000472027 RGS19P49795 217 aa10.87□□□□□ -0.67
SYN3-211ENST00000472027 SOX10P56693 466 aa10.87□□□□□ -0.67
SYN3-211ENST00000472027 ERVK-9P63128 1117 aa10.87□□□□□ -0.67
SYN3-211ENST00000472027 ERVK-24P63145 666 aa10.87□□□□□ -0.67
SYN3-211ENST00000472027 LBX2Q6XYB7 198 aa10.87□□□□□ -0.67
SYN3-211ENST00000472027 CENPQQ7L2Z9 268 aaPredicted RBP10.87□□□□□ -0.67
SYN3-211ENST00000472027 SH3TC2Q8TF17 1288 aa10.87□□□□□ -0.67
SYN3-211ENST00000472027 MKL1Q969V6 931 aa10.87□□□□□ -0.67
SYN3-211ENST00000472027 CEP95Q96GE4 821 aa10.87□□□□□ -0.67
SYN3-211ENST00000472027 TANGO6Q9C0B7 1094 aa10.87□□□□□ -0.67
SYN3-211ENST00000472027 GOPCQ9HD26 462 aa10.87□□□□□ -0.67
SYN3-211ENST00000472027 MTMR4Q9NYA4 1195 aa10.87□□□□□ -0.67
SYN3-211ENST00000472027 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.87□□□□□ -0.67
SYN3-211ENST00000472027 RABGAP1Q9Y3P9 1069 aa10.87□□□□□ -0.67
SYN3-211ENST00000472027 TSPY2A6NKD2 308 aa10.86□□□□□ -0.67
SYN3-211ENST00000472027 SPDYE16A6NNV3 312 aaPredicted RBP10.86□□□□□ -0.67
SYN3-211ENST00000472027 F5H6K3 240 aa10.86□□□□□ -0.67
SYN3-211ENST00000472027 WDR46O15213 610 aaKnown RBP10.86□□□□□ -0.67
SYN3-211ENST00000472027 RAD21O60216 631 aa10.86□□□□□ -0.67
SYN3-211ENST00000472027 TTLL1O95922 423 aa10.86□□□□□ -0.67
SYN3-211ENST00000472027 FGRP09769 529 aa10.86□□□□□ -0.67
SYN3-211ENST00000472027 GRK4P32298 578 aa10.86□□□□□ -0.67
SYN3-211ENST00000472027 DSG3P32926 999 aa10.86□□□□□ -0.67
SYN3-211ENST00000472027 HAND2P61296 217 aa10.86□□□□□ -0.67
SYN3-211ENST00000472027 KLRC3Q07444 240 aa10.86□□□□□ -0.67
SYN3-211ENST00000472027 ZNF333Q96JL9 665 aa10.86□□□□□ -0.67
SYN3-211ENST00000472027 BTBD7Q9P203 1132 aa10.86□□□□□ -0.67
SYN3-211ENST00000472027 GJD2Q9UKL4 321 aa10.86□□□□□ -0.67
SYN3-211ENST00000472027 ZMYM6O95789 1325 aa10.85□□□□□ -0.67
SYN3-211ENST00000472027 ZNF213O14771 459 aa10.85□□□□□ -0.67
SYN3-211ENST00000472027 ORC4O43929 436 aa10.85□□□□□ -0.67
SYN3-211ENST00000472027 ADCY3O60266 1144 aa10.85□□□□□ -0.67
SYN3-211ENST00000472027 RANBP6O60518 1105 aaKnown RBP10.85□□□□□ -0.67
SYN3-211ENST00000472027 FLOT1O75955 427 aa10.85□□□□□ -0.67
SYN3-211ENST00000472027 CHMLP26374 656 aa10.85□□□□□ -0.67
SYN3-211ENST00000472027 MAPK4P31152 587 aa10.85□□□□□ -0.67
SYN3-211ENST00000472027 IRF5Q13568 498 aa10.85□□□□□ -0.67
SYN3-211ENST00000472027 RRP12Q5JTH9 1297 aaKnown RBP10.85□□□□□ -0.67
SYN3-211ENST00000472027 CCAR1Q8IX12 1150 aaKnown RBP10.85□□□□□ -0.67
SYN3-211ENST00000472027 DSCC1Q9BVC3 393 aa10.85□□□□□ -0.67
SYN3-211ENST00000472027 PORCNQ9H237 461 aa10.85□□□□□ -0.67
SYN3-211ENST00000472027 IL25Q9H293 177 aa10.85□□□□□ -0.67
SYN3-211ENST00000472027 IL17RBQ9NRM6 502 aa10.85□□□□□ -0.67
SYN3-211ENST00000472027 TOMM22Q9NS69 142 aa10.85□□□□□ -0.67
SYN3-211ENST00000472027 POTEFA5A3E0 1075 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 NMT2O60551 498 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 NDUFB10O96000 172 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 MYCP01106 439 aaPredicted RBP10.84□□□□□ -0.67
SYN3-211ENST00000472027 CCNA1P78396 465 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 FAM83BQ5T0W9 1011 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 AKNAD1Q5T1N1 836 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 SAMD1Q6SPF0 538 aaPredicted RBP10.84□□□□□ -0.67
SYN3-211ENST00000472027 MFSD6Q6ZSS7 791 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 GPR142Q7Z601 462 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 SKAP1Q86WV1 359 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 SLAIN1Q8ND83 568 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 PXYLP1Q8TE99 480 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 STAG1Q8WVM7 1258 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 RUFY2Q8WXA3 655 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 ATG4CQ96DT6 458 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 CCDC136Q96JN2 1154 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 NUP88Q99567 741 aaPredicted RBP10.84□□□□□ -0.67
SYN3-211ENST00000472027 NUDT12Q9BQG2 462 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 TMEM106CQ9BVX2 250 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 FBXO28Q9NVF7 368 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 BIN2Q9UBW5 565 aaPredicted RBP10.84□□□□□ -0.67
SYN3-211ENST00000472027 SYNPO2Q9UMS6 1093 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 ADAMTS5Q9UNA0 930 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 PLIN4Q96Q06 1357 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 MYH8P13535 1937 aa10.84□□□□□ -0.67
SYN3-211ENST00000472027 NEFLP07196 543 aa10.83□□□□□ -0.68
SYN3-211ENST00000472027 PCP11498 1178 aaKnown RBP10.83□□□□□ -0.68
SYN3-211ENST00000472027 ELNP15502 786 aa10.83□□□□□ -0.68
SYN3-211ENST00000472027 CYP2B6P20813 491 aa10.83□□□□□ -0.68
SYN3-211ENST00000472027 UBXN2AP68543 259 aa10.83□□□□□ -0.68
SYN3-211ENST00000472027 MTFR1Q15390 333 aa10.83□□□□□ -0.68
SYN3-211ENST00000472027 PPP4R3BQ5MIZ7 849 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms