RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 LBX2Q6XYB7 198 aa11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 SPICE1Q8N0Z3 855 aa11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 STK11IPQ8N1F8 1099 aa11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 TRPV1Q8NER1 839 aa11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 GCC1Q96CN9 775 aa11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 SEC62Q99442 399 aaKnown RBP11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 EPB41L4AQ9HCS5 686 aaPredicted RBP11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 HMX1Q9NP08 348 aaPredicted RBP11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 ATP8A2Q9NTI2 1148 aa11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 ECHDC1Q9NTX5 307 aa11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 OGDHLQ9ULD0 1010 aa11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 SLC4A4Q9Y6R1 1079 aa11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 PFASO15067 1338 aa11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 M0R2C6 588 aa11.79□□□□□ -0.52
RPRD1B-204ENST00000471511 USP14P54578 494 aa11.79□□□□□ -0.52
RPRD1B-204ENST00000471511 MAP2K5Q13163 448 aa11.79□□□□□ -0.52
RPRD1B-204ENST00000471511 C16orf86Q6ZW13 317 aa11.79□□□□□ -0.52
RPRD1B-204ENST00000471511 MOV10L1Q9BXT6 1211 aaKnown RBP11.79□□□□□ -0.52
RPRD1B-204ENST00000471511 FBXO28Q9NVF7 368 aa11.79□□□□□ -0.52
RPRD1B-204ENST00000471511 TMX2Q9Y320 296 aa11.79□□□□□ -0.52
RPRD1B-204ENST00000471511 BAZ2AQ9UIF9 1905 aaKnown RBP11.79□□□□□ -0.52
RPRD1B-204ENST00000471511 COBLO75128 1261 aa11.78□□□□□ -0.52
RPRD1B-204ENST00000471511 EEF2P13639 858 aaKnown RBP11.78□□□□□ -0.52
RPRD1B-204ENST00000471511 DSG3P32926 999 aa11.78□□□□□ -0.52
RPRD1B-204ENST00000471511 GRB14Q14449 540 aa11.78□□□□□ -0.52
RPRD1B-204ENST00000471511 TMEM179Q6ZVK1 233 aa11.78□□□□□ -0.52
RPRD1B-204ENST00000471511 KBTBD3Q8NAB2 608 aa11.78□□□□□ -0.52
RPRD1B-204ENST00000471511 PI4K2BQ8TCG2 481 aa11.78□□□□□ -0.52
RPRD1B-204ENST00000471511 ATG4CQ96DT6 458 aa11.78□□□□□ -0.52
RPRD1B-204ENST00000471511 STAP2Q9UGK3 403 aa11.78□□□□□ -0.52
RPRD1B-204ENST00000471511 SLC15A5A6NIM6 579 aa11.77□□□□□ -0.53
RPRD1B-204ENST00000471511 SOX1O00570 391 aaPredicted RBP11.77□□□□□ -0.53
RPRD1B-204ENST00000471511 FOXP2O15409 715 aa11.77□□□□□ -0.53
RPRD1B-204ENST00000471511 COL6A1P12109 1028 aa11.77□□□□□ -0.53
RPRD1B-204ENST00000471511 ZKSCAN1P17029 563 aaPredicted RBP11.77□□□□□ -0.53
RPRD1B-204ENST00000471511 RASA1P20936 1047 aa11.77□□□□□ -0.53
RPRD1B-204ENST00000471511 CYP2C19P33261 490 aa11.77□□□□□ -0.53
RPRD1B-204ENST00000471511 RGS2P41220 211 aa11.77□□□□□ -0.53
RPRD1B-204ENST00000471511 COG2Q14746 738 aa11.77□□□□□ -0.53
RPRD1B-204ENST00000471511 SOCS4Q8WXH5 440 aa11.77□□□□□ -0.53
RPRD1B-204ENST00000471511 HTATIP2Q9BUP3 242 aa11.77□□□□□ -0.53
RPRD1B-204ENST00000471511 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.77□□□□□ -0.53
RPRD1B-204ENST00000471511 VCPKMTQ9H867 229 aa11.77□□□□□ -0.53
RPRD1B-204ENST00000471511 SWAP70Q9UH65 585 aa11.77□□□□□ -0.53
RPRD1B-204ENST00000471511 ZMYND8Q9ULU4 1186 aaPredicted RBP11.77□□□□□ -0.53
RPRD1B-204ENST00000471511 TACC3Q9Y6A5 838 aa11.77□□□□□ -0.53
RPRD1B-204ENST00000471511 SALL3Q9BXA9 1300 aa11.77□□□□□ -0.53
RPRD1B-204ENST00000471511 RNF113AO15541 343 aaKnown RBP11.76□□□□□ -0.53
RPRD1B-204ENST00000471511 HOXC6P09630 235 aa11.76□□□□□ -0.53
RPRD1B-204ENST00000471511 ERCC3P19447 782 aa11.76□□□□□ -0.53
RPRD1B-204ENST00000471511 ICA1Q05084 483 aa11.76□□□□□ -0.53
RPRD1B-204ENST00000471511 TMEM132BQ14DG7 1078 aa11.76□□□□□ -0.53
RPRD1B-204ENST00000471511 WDR78Q5VTH9 848 aa11.76□□□□□ -0.53
RPRD1B-204ENST00000471511 NECAB2Q7Z6G3 386 aa11.76□□□□□ -0.53
RPRD1B-204ENST00000471511 REPS2Q8NFH8 660 aa11.76□□□□□ -0.53
RPRD1B-204ENST00000471511 GTF3C2Q8WUA4 911 aaPredicted RBP11.76□□□□□ -0.53
RPRD1B-204ENST00000471511 CRBNQ96SW2 442 aa11.76□□□□□ -0.53
RPRD1B-204ENST00000471511 NUP88Q99567 741 aaPredicted RBP11.76□□□□□ -0.53
RPRD1B-204ENST00000471511 APBA2Q99767 749 aa11.76□□□□□ -0.53
RPRD1B-204ENST00000471511 TANGO6Q9C0B7 1094 aa11.76□□□□□ -0.53
RPRD1B-204ENST00000471511 SPATC1LQ9H0A9 340 aa11.76□□□□□ -0.53
RPRD1B-204ENST00000471511 CHMP4BQ9H444 224 aaKnown RBP11.76□□□□□ -0.53
RPRD1B-204ENST00000471511 ADAMTS5Q9UNA0 930 aa11.76□□□□□ -0.53
RPRD1B-204ENST00000471511 IGKV6D-41A0A0C4DH26 115 aa11.75□□□□□ -0.53
RPRD1B-204ENST00000471511 GPAA1O43292 621 aa11.75□□□□□ -0.53
RPRD1B-204ENST00000471511 EVI5O60447 810 aa11.75□□□□□ -0.53
RPRD1B-204ENST00000471511 PRDM1O75626 825 aa11.75□□□□□ -0.53
RPRD1B-204ENST00000471511 SYN1P17600 705 aa11.75□□□□□ -0.53
RPRD1B-204ENST00000471511 SBK1Q52WX2 424 aa11.75□□□□□ -0.53
RPRD1B-204ENST00000471511 PRAMEF19Q5SWL8 479 aa11.75□□□□□ -0.53
RPRD1B-204ENST00000471511 SAMD1Q6SPF0 538 aaPredicted RBP11.75□□□□□ -0.53
RPRD1B-204ENST00000471511 C7orf61Q8IZ16 206 aa11.75□□□□□ -0.53
RPRD1B-204ENST00000471511 ANKLE1Q8NAG6 615 aa11.75□□□□□ -0.53
RPRD1B-204ENST00000471511 APPBP2Q92624 585 aa11.75□□□□□ -0.53
RPRD1B-204ENST00000471511 C11orf49Q9H6J7 331 aa11.75□□□□□ -0.53
RPRD1B-204ENST00000471511 INCENPQ9NQS7 918 aa11.75□□□□□ -0.53
RPRD1B-204ENST00000471511 HOXC10Q9NYD6 342 aa11.75□□□□□ -0.53
RPRD1B-204ENST00000471511 LAMA3Q16787 3333 aa11.75□□□□□ -0.53
RPRD1B-204ENST00000471511 A0A0G2JMZ2 1700 aa11.74□□□□□ -0.53
RPRD1B-204ENST00000471511 MINDY4BA8MYZ0 360 aa11.74□□□□□ -0.53
RPRD1B-204ENST00000471511 FLOT1O75955 427 aa11.74□□□□□ -0.53
RPRD1B-204ENST00000471511 ADORA2AP29274 412 aa11.74□□□□□ -0.53
RPRD1B-204ENST00000471511 RRP1P56182 461 aaKnown RBP11.74□□□□□ -0.53
RPRD1B-204ENST00000471511 ATP2B2Q01814 1243 aa11.74□□□□□ -0.53
RPRD1B-204ENST00000471511 LRRC26Q2I0M4 334 aa11.74□□□□□ -0.53
RPRD1B-204ENST00000471511 ANO1Q5XXA6 986 aa11.74□□□□□ -0.53
RPRD1B-204ENST00000471511 CCAR1Q8IX12 1150 aaKnown RBP11.74□□□□□ -0.53
RPRD1B-204ENST00000471511 CCDC17Q96LX7 622 aa11.74□□□□□ -0.53
RPRD1B-204ENST00000471511 GDF15Q99988 308 aa11.74□□□□□ -0.53
RPRD1B-204ENST00000471511 NBPF3Q9H094 633 aa11.74□□□□□ -0.53
RPRD1B-204ENST00000471511 MYH7P12883 1935 aa11.73□□□□□ -0.53
RPRD1B-204ENST00000471511 CYBAP13498 195 aa11.73□□□□□ -0.53
RPRD1B-204ENST00000471511 CCNA1P78396 465 aa11.73□□□□□ -0.53
RPRD1B-204ENST00000471511 FAM83BQ5T0W9 1011 aa11.73□□□□□ -0.53
RPRD1B-204ENST00000471511 ZSCAN25Q6NSZ9 544 aa11.73□□□□□ -0.53
RPRD1B-204ENST00000471511 CCDC129Q6ZRS4 1044 aa11.73□□□□□ -0.53
RPRD1B-204ENST00000471511 TRMT44Q8IYL2 757 aaKnown RBP11.73□□□□□ -0.53
RPRD1B-204ENST00000471511 IFNL3Q8IZI9 196 aa11.73□□□□□ -0.53
RPRD1B-204ENST00000471511 LPAR1Q92633 364 aa11.73□□□□□ -0.53
RPRD1B-204ENST00000471511 LRCH3Q96II8 777 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms