RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 VCPKMTQ9H867 229 aa17.79■□□□□ 0.44
HOXB3-206ENST00000471459 GJD2Q9UKL4 321 aa17.79■□□□□ 0.44
HOXB3-206ENST00000471459 KIAA0100Q14667 2235 aaKnown RBP17.78■□□□□ 0.44
HOXB3-206ENST00000471459 TFRCP02786 760 aaKnown RBP17.78■□□□□ 0.44
HOXB3-206ENST00000471459 XRCC5P13010 732 aaKnown RBP17.78■□□□□ 0.44
HOXB3-206ENST00000471459 EEF2P13639 858 aaKnown RBP17.78■□□□□ 0.44
HOXB3-206ENST00000471459 CYP2B6P20813 491 aa17.78■□□□□ 0.44
HOXB3-206ENST00000471459 RGS2P41220 211 aa17.78■□□□□ 0.44
HOXB3-206ENST00000471459 GPR142Q7Z601 462 aa17.78■□□□□ 0.44
HOXB3-206ENST00000471459 SMC5Q8IY18 1101 aa17.78■□□□□ 0.44
HOXB3-206ENST00000471459 MB21D1Q8N884 522 aa17.78■□□□□ 0.44
HOXB3-206ENST00000471459 LNPKQ9C0E8 428 aa17.78■□□□□ 0.44
HOXB3-206ENST00000471459 UNC93B1Q9H1C4 597 aa17.78■□□□□ 0.44
HOXB3-206ENST00000471459 NAV1Q8NEY1 1877 aa17.78■□□□□ 0.44
HOXB3-206ENST00000471459 SPDYE16A6NNV3 312 aaPredicted RBP17.77■□□□□ 0.44
HOXB3-206ENST00000471459 TRIM6-TRIM34B2RNG4 842 aa17.77■□□□□ 0.44
HOXB3-206ENST00000471459 WDR46O15213 610 aaKnown RBP17.77■□□□□ 0.44
HOXB3-206ENST00000471459 FLOT1O75955 427 aa17.77■□□□□ 0.44
HOXB3-206ENST00000471459 SGPL1O95470 568 aa17.77■□□□□ 0.44
HOXB3-206ENST00000471459 SPICE1Q8N0Z3 855 aa17.77■□□□□ 0.44
HOXB3-206ENST00000471459 U2AF1L4Q8WU68 220 aaKnown RBP17.77■□□□□ 0.44
HOXB3-206ENST00000471459 HMX1Q9NP08 348 aaPredicted RBP17.77■□□□□ 0.44
HOXB3-206ENST00000471459 HELLSQ9NRZ9 838 aa17.77■□□□□ 0.44
HOXB3-206ENST00000471459 SALL3Q9BXA9 1300 aa17.76■□□□□ 0.43
HOXB3-206ENST00000471459 PEX10O60683 326 aa17.76■□□□□ 0.43
HOXB3-206ENST00000471459 SAMD1Q6SPF0 538 aaPredicted RBP17.76■□□□□ 0.43
HOXB3-206ENST00000471459 CHD1LQ86WJ1 897 aa17.76■□□□□ 0.43
HOXB3-206ENST00000471459 SIAH1Q8IUQ4 282 aa17.76■□□□□ 0.43
HOXB3-206ENST00000471459 SEC62Q99442 399 aaKnown RBP17.76■□□□□ 0.43
HOXB3-206ENST00000471459 PORCNQ9H237 461 aa17.76■□□□□ 0.43
HOXB3-206ENST00000471459 RPTORQ8N122 1335 aa17.75■□□□□ 0.43
HOXB3-206ENST00000471459 ZSWIM8A7E2V4 1837 aa17.75■□□□□ 0.43
HOXB3-206ENST00000471459 SLC15A5A6NIM6 579 aa17.75■□□□□ 0.43
HOXB3-206ENST00000471459 SMIM22K7EJ46 135 aa17.75■□□□□ 0.43
HOXB3-206ENST00000471459 STRNO43815 780 aa17.75■□□□□ 0.43
HOXB3-206ENST00000471459 ZKSCAN1P17029 563 aaPredicted RBP17.75■□□□□ 0.43
HOXB3-206ENST00000471459 RASA1P20936 1047 aa17.75■□□□□ 0.43
HOXB3-206ENST00000471459 DSG3P32926 999 aa17.75■□□□□ 0.43
HOXB3-206ENST00000471459 PPP4R3BQ5MIZ7 849 aa17.75■□□□□ 0.43
HOXB3-206ENST00000471459 CLEC10AQ8IUN9 316 aa17.75■□□□□ 0.43
HOXB3-206ENST00000471459 RILPL2Q969X0 211 aa17.75■□□□□ 0.43
HOXB3-206ENST00000471459 DEFB118Q96PH6 123 aa17.75■□□□□ 0.43
HOXB3-206ENST00000471459 HTATIP2Q9BUP3 242 aa17.75■□□□□ 0.43
HOXB3-206ENST00000471459 NYAP2Q9P242 653 aa17.75■□□□□ 0.43
HOXB3-206ENST00000471459 CNMDO75829 334 aa17.74■□□□□ 0.43
HOXB3-206ENST00000471459 TSPY3P0CV98 308 aa17.74■□□□□ 0.43
HOXB3-206ENST00000471459 TSPY8P0CW00 308 aa17.74■□□□□ 0.43
HOXB3-206ENST00000471459 NUCB1Q02818 461 aa17.74■□□□□ 0.43
HOXB3-206ENST00000471459 MAP2K5Q13163 448 aa17.74■□□□□ 0.43
HOXB3-206ENST00000471459 PLS1Q14651 629 aa17.74■□□□□ 0.43
HOXB3-206ENST00000471459 MCMDC2Q4G0Z9 681 aa17.74■□□□□ 0.43
HOXB3-206ENST00000471459 EPB41L4AQ9HCS5 686 aaPredicted RBP17.74■□□□□ 0.43
HOXB3-206ENST00000471459 SLC5A4Q9NY91 659 aa17.74■□□□□ 0.43
HOXB3-206ENST00000471459 BTBD7Q9P203 1132 aa17.74■□□□□ 0.43
HOXB3-206ENST00000471459 CLIP2Q9UDT6 1046 aa17.74■□□□□ 0.43
HOXB3-206ENST00000471459 DDX60LQ5H9U9 1706 aaKnown RBP17.74■□□□□ 0.43
HOXB3-206ENST00000471459 HTTP42858 3142 aa17.74■□□□□ 0.43
HOXB3-206ENST00000471459 IGHDP01880 384 aa17.73■□□□□ 0.43
HOXB3-206ENST00000471459 PTPREP23469 700 aa17.73■□□□□ 0.43
HOXB3-206ENST00000471459 MFAP1P55081 439 aaKnown RBP17.73■□□□□ 0.43
HOXB3-206ENST00000471459 PPARAQ07869 468 aa17.73■□□□□ 0.43
HOXB3-206ENST00000471459 MORN1Q5T089 497 aa17.73■□□□□ 0.43
HOXB3-206ENST00000471459 MFSD14CQ5VZR4 134 aa17.73■□□□□ 0.43
HOXB3-206ENST00000471459 APBA2Q99767 749 aa17.73■□□□□ 0.43
HOXB3-206ENST00000471459 SPATC1LQ9H0A9 340 aa17.73■□□□□ 0.43
HOXB3-206ENST00000471459 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.73■□□□□ 0.43
HOXB3-206ENST00000471459 MROH8Q9H579 483 aa17.73■□□□□ 0.43
HOXB3-206ENST00000471459 CTDP1Q9Y5B0 961 aaPredicted RBP17.73■□□□□ 0.43
HOXB3-206ENST00000471459 ROBO3Q96MS0 1386 aa17.73■□□□□ 0.43
HOXB3-206ENST00000471459 MYH7P12883 1935 aa17.72■□□□□ 0.43
HOXB3-206ENST00000471459 PDE4DIPQ5VU43 2346 aa17.72■□□□□ 0.43
HOXB3-206ENST00000471459 MGAMO43451 1857 aa17.72■□□□□ 0.43
HOXB3-206ENST00000471459 PRDM1O75626 825 aa17.72■□□□□ 0.43
HOXB3-206ENST00000471459 FARP2O94887 1054 aaPredicted RBP17.72■□□□□ 0.43
HOXB3-206ENST00000471459 KIAA1755Q5JYT7 1200 aa17.72■□□□□ 0.43
HOXB3-206ENST00000471459 POTEEQ6S8J3 1075 aa17.72■□□□□ 0.43
HOXB3-206ENST00000471459 DPP9Q86TI2 863 aa17.72■□□□□ 0.43
HOXB3-206ENST00000471459 SHCBP1Q8NEM2 672 aa17.72■□□□□ 0.43
HOXB3-206ENST00000471459 TRIB2Q92519 343 aa17.72■□□□□ 0.43
HOXB3-206ENST00000471459 DPF3Q92784 378 aa17.72■□□□□ 0.43
HOXB3-206ENST00000471459 MOV10L1Q9BXT6 1211 aaKnown RBP17.72■□□□□ 0.43
HOXB3-206ENST00000471459 PAK6Q9NQU5 681 aaPredicted RBP17.72■□□□□ 0.43
HOXB3-206ENST00000471459 F5H6K3 240 aa17.71■□□□□ 0.43
HOXB3-206ENST00000471459 SLC25A27O95847 323 aa17.71■□□□□ 0.43
HOXB3-206ENST00000471459 TTLL1O95922 423 aa17.71■□□□□ 0.43
HOXB3-206ENST00000471459 TFAP4Q01664 338 aa17.71■□□□□ 0.43
HOXB3-206ENST00000471459 KLRC3Q07444 240 aa17.71■□□□□ 0.43
HOXB3-206ENST00000471459 NCAPG2Q86XI2 1143 aa17.71■□□□□ 0.43
HOXB3-206ENST00000471459 USP6NLQ92738 828 aa17.71■□□□□ 0.43
HOXB3-206ENST00000471459 ATG4CQ96DT6 458 aa17.71■□□□□ 0.43
HOXB3-206ENST00000471459 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.71■□□□□ 0.43
HOXB3-206ENST00000471459 SYNPO2Q9UMS6 1093 aa17.71■□□□□ 0.43
HOXB3-206ENST00000471459 BAZ2AQ9UIF9 1905 aaKnown RBP17.7■□□□□ 0.42
HOXB3-206ENST00000471459 PRKAR2AP13861 404 aaKnown RBP17.7■□□□□ 0.42
HOXB3-206ENST00000471459 ERCC3P19447 782 aa17.7■□□□□ 0.42
HOXB3-206ENST00000471459 COPB2P35606 906 aa17.7■□□□□ 0.42
HOXB3-206ENST00000471459 FAM83BQ5T0W9 1011 aa17.7■□□□□ 0.42
HOXB3-206ENST00000471459 CCDC129Q6ZRS4 1044 aa17.7■□□□□ 0.42
HOXB3-206ENST00000471459 PLEKHM2Q8IWE5 1019 aa17.7■□□□□ 0.42
HOXB3-206ENST00000471459 NEDD1Q8NHV4 660 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms