RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 TTC22Q5TAA0 569 aa9.15□□□□□ -0.94
TRIM59-204ENST00000471396 C17orf99Q6UX52 265 aa9.15□□□□□ -0.94
TRIM59-204ENST00000471396 TMEM179Q6ZVK1 233 aa9.15□□□□□ -0.94
TRIM59-204ENST00000471396 IFNL3Q8IZI9 196 aa9.15□□□□□ -0.94
TRIM59-204ENST00000471396 CD99L2Q8TCZ2 262 aa9.15□□□□□ -0.94
TRIM59-204ENST00000471396 TMC2Q8TDI7 906 aa9.15□□□□□ -0.94
TRIM59-204ENST00000471396 SMCR8Q8TEV9 937 aaPredicted RBP9.15□□□□□ -0.94
TRIM59-204ENST00000471396 ABHD8Q96I13 439 aa9.15□□□□□ -0.94
TRIM59-204ENST00000471396 KIAA1683Q9H0B3 1180 aa9.15□□□□□ -0.94
TRIM59-204ENST00000471396 NAPBQ9H115 298 aa9.15□□□□□ -0.94
TRIM59-204ENST00000471396 GREB1LQ9C091 1923 aaPredicted RBP9.15□□□□□ -0.95
TRIM59-204ENST00000471396 CCDC171Q6TFL3 1326 aa9.14□□□□□ -0.95
TRIM59-204ENST00000471396 HIP1O00291 1037 aa9.14□□□□□ -0.95
TRIM59-204ENST00000471396 FOXP2O15409 715 aa9.14□□□□□ -0.95
TRIM59-204ENST00000471396 NEFLP07196 543 aa9.14□□□□□ -0.95
TRIM59-204ENST00000471396 GSPT1P15170 499 aaKnown RBP9.14□□□□□ -0.95
TRIM59-204ENST00000471396 SDSP20132 328 aa9.14□□□□□ -0.95
TRIM59-204ENST00000471396 USP14P54578 494 aa9.14□□□□□ -0.95
TRIM59-204ENST00000471396 IRX3P78415 501 aaPredicted RBP9.14□□□□□ -0.95
TRIM59-204ENST00000471396 LACTBP83111 547 aaPredicted RBP9.14□□□□□ -0.95
TRIM59-204ENST00000471396 MCMDC2Q4G0Z9 681 aa9.14□□□□□ -0.95
TRIM59-204ENST00000471396 VPS53Q5VIR6 699 aa9.14□□□□□ -0.95
TRIM59-204ENST00000471396 USP17L2Q6R6M4 530 aa9.14□□□□□ -0.95
TRIM59-204ENST00000471396 MAMSTRQ6ZN01 415 aa9.14□□□□□ -0.95
TRIM59-204ENST00000471396 CENPQQ7L2Z9 268 aaPredicted RBP9.14□□□□□ -0.95
TRIM59-204ENST00000471396 ZNF589Q86UQ0 364 aaPredicted RBP9.14□□□□□ -0.95
TRIM59-204ENST00000471396 ACER1Q8TDN7 264 aa9.14□□□□□ -0.95
TRIM59-204ENST00000471396 C12orf42Q96LP6 360 aa9.14□□□□□ -0.95
TRIM59-204ENST00000471396 ZNF287Q9HBT7 754 aa9.14□□□□□ -0.95
TRIM59-204ENST00000471396 DIAPH3Q9NSV4 1193 aa9.14□□□□□ -0.95
TRIM59-204ENST00000471396 EMILIN3Q9NT22 766 aa9.14□□□□□ -0.95
TRIM59-204ENST00000471396 CPA4Q9UI42 421 aa9.14□□□□□ -0.95
TRIM59-204ENST00000471396 TRIM17Q9Y577 477 aa9.14□□□□□ -0.95
TRIM59-204ENST00000471396 ZMYM6O95789 1325 aa9.13□□□□□ -0.95
TRIM59-204ENST00000471396 ZSWIM8A7E2V4 1837 aa9.13□□□□□ -0.95
TRIM59-204ENST00000471396 C2orf72A6NCS6 295 aa9.13□□□□□ -0.95
TRIM59-204ENST00000471396 SLC3A2P08195 630 aaKnown RBP9.13□□□□□ -0.95
TRIM59-204ENST00000471396 BCRP11274 1271 aa9.13□□□□□ -0.95
TRIM59-204ENST00000471396 RASA1P20936 1047 aa9.13□□□□□ -0.95
TRIM59-204ENST00000471396 OSBPP22059 807 aa9.13□□□□□ -0.95
TRIM59-204ENST00000471396 MFAP1P55081 439 aaKnown RBP9.13□□□□□ -0.95
TRIM59-204ENST00000471396 ICA1Q05084 483 aa9.13□□□□□ -0.95
TRIM59-204ENST00000471396 PPARAQ07869 468 aa9.13□□□□□ -0.95
TRIM59-204ENST00000471396 DSG2Q14126 1118 aa9.13□□□□□ -0.95
TRIM59-204ENST00000471396 KIF22Q14807 665 aa9.13□□□□□ -0.95
TRIM59-204ENST00000471396 ARHGEF6Q15052 776 aa9.13□□□□□ -0.95
TRIM59-204ENST00000471396 ZYXQ15942 572 aaKnown RBP9.13□□□□□ -0.95
TRIM59-204ENST00000471396 IFFO2Q5TF58 517 aa9.13□□□□□ -0.95
TRIM59-204ENST00000471396 FBXO46Q6PJ61 603 aaPredicted RBP9.13□□□□□ -0.95
TRIM59-204ENST00000471396 OTOP1Q7RTM1 612 aa9.13□□□□□ -0.95
TRIM59-204ENST00000471396 CLEC10AQ8IUN9 316 aa9.13□□□□□ -0.95
TRIM59-204ENST00000471396 ASCC2Q9H1I8 757 aaPredicted RBP9.13□□□□□ -0.95
TRIM59-204ENST00000471396 EFCC1Q9HA90 598 aa9.13□□□□□ -0.95
TRIM59-204ENST00000471396 MKNK2Q9HBH9 465 aa9.13□□□□□ -0.95
TRIM59-204ENST00000471396 ARHGEF10LQ9HCE6 1279 aa9.13□□□□□ -0.95
TRIM59-204ENST00000471396 PLIN4Q96Q06 1357 aa9.12□□□□□ -0.95
TRIM59-204ENST00000471396 A0A1W2PRG0 241 aa9.12□□□□□ -0.95
TRIM59-204ENST00000471396 CENPBP07199 599 aaPredicted RBP9.12□□□□□ -0.95
TRIM59-204ENST00000471396 VCAM1P19320 739 aa9.12□□□□□ -0.95
TRIM59-204ENST00000471396 HOXA7P31268 230 aaPredicted RBP9.12□□□□□ -0.95
TRIM59-204ENST00000471396 GCLCP48506 637 aaPredicted RBP9.12□□□□□ -0.95
TRIM59-204ENST00000471396 CAP1Q01518 475 aa9.12□□□□□ -0.95
TRIM59-204ENST00000471396 ALX1Q15699 326 aa9.12□□□□□ -0.95
TRIM59-204ENST00000471396 FAM110CQ1W6H9 321 aa9.12□□□□□ -0.95
TRIM59-204ENST00000471396 CWC27Q6UX04 472 aaKnown RBP9.12□□□□□ -0.95
TRIM59-204ENST00000471396 STK11IPQ8N1F8 1099 aa9.12□□□□□ -0.95
TRIM59-204ENST00000471396 SH2D4AQ9H788 454 aa9.12□□□□□ -0.95
TRIM59-204ENST00000471396 KANSL2Q9H9L4 492 aa9.12□□□□□ -0.95
TRIM59-204ENST00000471396 TMX2Q9Y320 296 aa9.12□□□□□ -0.95
TRIM59-204ENST00000471396 LAMA4Q16363 1823 aa9.12□□□□□ -0.95
TRIM59-204ENST00000471396 RAD50Q92878 1312 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 MGAMO43451 1857 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 DOCK3Q8IZD9 2030 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 USP17L15C9J2P7 530 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 USP17L13C9JLJ4 530 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 USP17L11C9JVI0 530 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 USP17L18D6R9N7 530 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 USP17L22D6RA61 530 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 USP17L17D6RBQ6 530 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 USP17L19D6RCP7 530 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 USP17L20D6RJB6 530 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 PRDM1O75626 825 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 GNRH1P01148 92 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 HSPD1P10809 573 aaKnown RBP9.11□□□□□ -0.95
TRIM59-204ENST00000471396 FCGRTP55899 365 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 PDE4BQ07343 736 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 USP17L24Q0WX57 530 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 CAMK2BQ13554 666 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 LCE2DQ5TA82 110 aaPredicted RBP9.11□□□□□ -0.95
TRIM59-204ENST00000471396 TMEM92Q6UXU6 159 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 SIAH1Q8IUQ4 282 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 ZNF444Q8N0Y2 327 aaPredicted RBP9.11□□□□□ -0.95
TRIM59-204ENST00000471396 ANKRD13CQ8N6S4 541 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 GTF3C2Q8WUA4 911 aaPredicted RBP9.11□□□□□ -0.95
TRIM59-204ENST00000471396 LPAR1Q92633 364 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.11□□□□□ -0.95
TRIM59-204ENST00000471396 ARHGAP39Q9C0H5 1083 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 ANAPC4Q9UJX5 808 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 HPS5Q9UPZ3 1129 aa9.11□□□□□ -0.95
TRIM59-204ENST00000471396 PTPN22Q9Y2R2 807 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms