RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 HOXA7P31268 230 aaPredicted RBP14.67□□□□□ -0.06
SCNM1-205ENST00000471039 IRX3P78415 501 aaPredicted RBP14.67□□□□□ -0.06
SCNM1-205ENST00000471039 NKX2-3Q8TAU0 364 aa14.67□□□□□ -0.06
SCNM1-205ENST00000471039 SMCR8Q8TEV9 937 aaPredicted RBP14.67□□□□□ -0.06
SCNM1-205ENST00000471039 LPAR1Q92633 364 aa14.67□□□□□ -0.06
SCNM1-205ENST00000471039 MAP4K1Q92918 833 aa14.67□□□□□ -0.06
SCNM1-205ENST00000471039 RPAP3Q9H6T3 665 aaPredicted RBP14.67□□□□□ -0.06
SCNM1-205ENST00000471039 CPA4Q9UI42 421 aa14.67□□□□□ -0.06
SCNM1-205ENST00000471039 RBBP6Q7Z6E9 1792 aaKnown RBP14.67□□□□□ -0.06
SCNM1-205ENST00000471039 WDR46O15213 610 aaKnown RBP14.66□□□□□ -0.06
SCNM1-205ENST00000471039 TTLL1O95922 423 aa14.66□□□□□ -0.06
SCNM1-205ENST00000471039 BCRP11274 1271 aa14.66□□□□□ -0.06
SCNM1-205ENST00000471039 OSBPP22059 807 aa14.66□□□□□ -0.06
SCNM1-205ENST00000471039 C17orf99Q6UX52 265 aa14.66□□□□□ -0.06
SCNM1-205ENST00000471039 KIAA1211Q6ZU35 1233 aa14.66□□□□□ -0.06
SCNM1-205ENST00000471039 SPICE1Q8N0Z3 855 aa14.66□□□□□ -0.06
SCNM1-205ENST00000471039 LRRC47Q8N1G4 583 aaKnown RBP14.66□□□□□ -0.06
SCNM1-205ENST00000471039 GOPCQ9HD26 462 aa14.66□□□□□ -0.06
SCNM1-205ENST00000471039 IL17RBQ9NRM6 502 aa14.66□□□□□ -0.06
SCNM1-205ENST00000471039 SYNPO2Q9UMS6 1093 aa14.66□□□□□ -0.06
SCNM1-205ENST00000471039 TAF6LQ9Y6J9 622 aa14.66□□□□□ -0.06
SCNM1-205ENST00000471039 MYH6P13533 1939 aa14.66□□□□□ -0.06
SCNM1-205ENST00000471039 DOCK3Q8IZD9 2030 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 B4E1Z4 1266 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 USP17L15C9J2P7 530 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 USP17L13C9JLJ4 530 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 USP17L11C9JVI0 530 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 USP17L18D6R9N7 530 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 USP17L22D6RA61 530 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 USP17L17D6RBQ6 530 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 USP17L19D6RCP7 530 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 USP17L20D6RJB6 530 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 NOVP48745 357 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 NT5C2P49902 561 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 HERVK_113P62684 666 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 CAP1Q01518 475 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 SP3Q02447 781 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 USP17L24Q0WX57 530 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 COL13A1Q5TAT6 717 aaPredicted RBP14.65□□□□□ -0.06
SCNM1-205ENST00000471039 CD99L2Q8TCZ2 262 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 ESR2Q92731 530 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 TANGO6Q9C0B7 1094 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 CLIP2Q9UDT6 1046 aa14.65□□□□□ -0.06
SCNM1-205ENST00000471039 NDUFB10O96000 172 aa14.64□□□□□ -0.07
SCNM1-205ENST00000471039 FAM110CQ1W6H9 321 aa14.64□□□□□ -0.07
SCNM1-205ENST00000471039 PPP4R3BQ5MIZ7 849 aa14.64□□□□□ -0.07
SCNM1-205ENST00000471039 CATSPERGQ6ZRH7 1159 aa14.64□□□□□ -0.07
SCNM1-205ENST00000471039 STOX1Q6ZVD7 989 aa14.64□□□□□ -0.07
SCNM1-205ENST00000471039 ANKRD13CQ8N6S4 541 aa14.64□□□□□ -0.07
SCNM1-205ENST00000471039 MKL1Q969V6 931 aa14.64□□□□□ -0.07
SCNM1-205ENST00000471039 ERO1AQ96HE7 468 aa14.64□□□□□ -0.07
SCNM1-205ENST00000471039 CNNM2Q9H8M5 875 aa14.64□□□□□ -0.07
SCNM1-205ENST00000471039 STX8Q9UNK0 236 aa14.64□□□□□ -0.07
SCNM1-205ENST00000471039 PLXNA1Q9UIW2 1896 aa14.63□□□□□ -0.07
SCNM1-205ENST00000471039 SPDYE16A6NNV3 312 aaPredicted RBP14.63□□□□□ -0.07
SCNM1-205ENST00000471039 KDM4AO75164 1064 aa14.63□□□□□ -0.07
SCNM1-205ENST00000471039 GCLCP48506 637 aaPredicted RBP14.63□□□□□ -0.07
SCNM1-205ENST00000471039 LACTBP83111 547 aaPredicted RBP14.63□□□□□ -0.07
SCNM1-205ENST00000471039 GMCL1P1Q8NEA9 526 aa14.63□□□□□ -0.07
SCNM1-205ENST00000471039 GTF3C2Q8WUA4 911 aaPredicted RBP14.63□□□□□ -0.07
SCNM1-205ENST00000471039 KRT23Q9C075 422 aa14.63□□□□□ -0.07
SCNM1-205ENST00000471039 TCP11L1Q9NUJ3 509 aa14.63□□□□□ -0.07
SCNM1-205ENST00000471039 E7EWF7 191 aa14.62□□□□□ -0.07
SCNM1-205ENST00000471039 F5H6K3 240 aa14.62□□□□□ -0.07
SCNM1-205ENST00000471039 SLC27A2O14975 620 aa14.62□□□□□ -0.07
SCNM1-205ENST00000471039 RAD21O60216 631 aa14.62□□□□□ -0.07
SCNM1-205ENST00000471039 KLRC3Q07444 240 aa14.62□□□□□ -0.07
SCNM1-205ENST00000471039 FAM83BQ5T0W9 1011 aa14.62□□□□□ -0.07
SCNM1-205ENST00000471039 RCSD1Q6JBY9 416 aa14.62□□□□□ -0.07
SCNM1-205ENST00000471039 POTEEQ6S8J3 1075 aa14.62□□□□□ -0.07
SCNM1-205ENST00000471039 LBX2Q6XYB7 198 aa14.62□□□□□ -0.07
SCNM1-205ENST00000471039 RASGRP2Q7LDG7 609 aa14.62□□□□□ -0.07
SCNM1-205ENST00000471039 CTU1Q7Z7A3 348 aaKnown RBP14.62□□□□□ -0.07
SCNM1-205ENST00000471039 NUP88Q99567 741 aaPredicted RBP14.62□□□□□ -0.07
SCNM1-205ENST00000471039 P2RX7Q99572 595 aaKnown RBP14.62□□□□□ -0.07
SCNM1-205ENST00000471039 ZKSCAN3Q9BRR0 538 aa14.62□□□□□ -0.07
SCNM1-205ENST00000471039 ARHGAP39Q9C0H5 1083 aa14.62□□□□□ -0.07
SCNM1-205ENST00000471039 MORF4L1Q9UBU8 362 aa14.62□□□□□ -0.07
SCNM1-205ENST00000471039 TNKSO95271 1327 aa14.62□□□□□ -0.07
SCNM1-205ENST00000471039 MYPNQ86TC9 1320 aa14.62□□□□□ -0.07
SCNM1-205ENST00000471039 CENPFP49454 3210 aa14.62□□□□□ -0.07
SCNM1-205ENST00000471039 ZNFX1Q9P2E3 1918 aaKnown RBP14.61□□□□□ -0.07
SCNM1-205ENST00000471039 FLOT1O75955 427 aa14.61□□□□□ -0.07
SCNM1-205ENST00000471039 CTGFP29279 349 aa14.61□□□□□ -0.07
SCNM1-205ENST00000471039 NECTIN1Q15223 517 aa14.61□□□□□ -0.07
SCNM1-205ENST00000471039 CREB3L3Q68CJ9 461 aa14.61□□□□□ -0.07
SCNM1-205ENST00000471039 OTOP1Q7RTM1 612 aa14.61□□□□□ -0.07
SCNM1-205ENST00000471039 IQCA1Q86XH1 822 aa14.61□□□□□ -0.07
SCNM1-205ENST00000471039 TXNRD2Q9NNW7 524 aa14.61□□□□□ -0.07
SCNM1-205ENST00000471039 PEX10O60683 326 aa14.6□□□□□ -0.07
SCNM1-205ENST00000471039 CNMDO75829 334 aa14.6□□□□□ -0.07
SCNM1-205ENST00000471039 TOP1P11387 765 aaKnown RBP14.6□□□□□ -0.07
SCNM1-205ENST00000471039 TRDNQ13061 729 aa14.6□□□□□ -0.07
SCNM1-205ENST00000471039 KIF22Q14807 665 aa14.6□□□□□ -0.07
SCNM1-205ENST00000471039 SLFN13Q68D06 897 aa14.6□□□□□ -0.07
SCNM1-205ENST00000471039 CYB5R4Q7L1T6 521 aa14.6□□□□□ -0.07
SCNM1-205ENST00000471039 RALYLQ86SE5 291 aaKnown RBP14.6□□□□□ -0.07
SCNM1-205ENST00000471039 NCOA7Q8NI08 942 aa14.6□□□□□ -0.07
SCNM1-205ENST00000471039 GMCL1Q96IK5 515 aa14.6□□□□□ -0.07
SCNM1-205ENST00000471039 TMEM47Q9BQJ4 181 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms