RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 FAM8A1Q9UBU6 413 aa9.27□□□□□ -0.93
PTP4A1-202ENST00000470661 PARP2Q9UGN5 583 aa9.27□□□□□ -0.93
PTP4A1-202ENST00000470661 TTC21AQ8NDW8 1320 aa9.27□□□□□ -0.93
PTP4A1-202ENST00000470661 RGPD5Q99666 1765 aa9.27□□□□□ -0.93
PTP4A1-202ENST00000470661 EIF4EBP3O60516 100 aaPredicted RBP9.26□□□□□ -0.93
PTP4A1-202ENST00000470661 H2AFB1P0C5Y9 115 aa9.26□□□□□ -0.93
PTP4A1-202ENST00000470661 H2AFB2P0C5Z0 115 aa9.26□□□□□ -0.93
PTP4A1-202ENST00000470661 DRD2P14416 443 aa9.26□□□□□ -0.93
PTP4A1-202ENST00000470661 EIF4BP23588 611 aaKnown RBP9.26□□□□□ -0.93
PTP4A1-202ENST00000470661 PPP2R3AQ06190 1150 aa9.26□□□□□ -0.93
PTP4A1-202ENST00000470661 AP3B2Q13367 1082 aa9.26□□□□□ -0.93
PTP4A1-202ENST00000470661 RRS1Q15050 365 aaKnown RBP9.26□□□□□ -0.93
PTP4A1-202ENST00000470661 EXOSC6Q5RKV6 272 aaKnown RBP9.26□□□□□ -0.93
PTP4A1-202ENST00000470661 PRR23CQ6ZRP0 262 aa9.26□□□□□ -0.93
PTP4A1-202ENST00000470661 C12orf50Q8NA57 414 aaPredicted RBP9.26□□□□□ -0.93
PTP4A1-202ENST00000470661 SMG8Q8ND04 991 aaKnown RBP9.26□□□□□ -0.93
PTP4A1-202ENST00000470661 STK35Q8TDR2 534 aa9.26□□□□□ -0.93
PTP4A1-202ENST00000470661 COL5A2P05997 1499 aaPredicted RBP9.26□□□□□ -0.93
PTP4A1-202ENST00000470661 AATKQ6ZMQ8 1374 aa9.25□□□□□ -0.93
PTP4A1-202ENST00000470661 FYB1O15117 783 aa9.25□□□□□ -0.93
PTP4A1-202ENST00000470661 PDE3AQ14432 1141 aa9.25□□□□□ -0.93
PTP4A1-202ENST00000470661 EZH2Q15910 746 aaKnown RBP9.25□□□□□ -0.93
PTP4A1-202ENST00000470661 KCNH5Q8NCM2 988 aa9.25□□□□□ -0.93
PTP4A1-202ENST00000470661 FRMD6Q96NE9 622 aa9.25□□□□□ -0.93
PTP4A1-202ENST00000470661 CYP4F12Q9HCS2 524 aa9.25□□□□□ -0.93
PTP4A1-202ENST00000470661 SLIT3O75094 1523 aa9.25□□□□□ -0.93
PTP4A1-202ENST00000470661 COL18A1P39060 1754 aa9.24□□□□□ -0.93
PTP4A1-202ENST00000470661 LMO7Q8WWI1 1683 aa9.24□□□□□ -0.93
PTP4A1-202ENST00000470661 TIAF1O95411 115 aa9.24□□□□□ -0.93
PTP4A1-202ENST00000470661 FGD1P98174 961 aa9.24□□□□□ -0.93
PTP4A1-202ENST00000470661 SULF2Q8IWU5 870 aa9.24□□□□□ -0.93
PTP4A1-202ENST00000470661 MARCH10Q8NA82 808 aaPredicted RBP9.24□□□□□ -0.93
PTP4A1-202ENST00000470661 ANKRD24Q8TF21 1146 aa9.24□□□□□ -0.93
PTP4A1-202ENST00000470661 CCDC86Q9H6F5 360 aaKnown RBP9.24□□□□□ -0.93
PTP4A1-202ENST00000470661 SUGCTQ9HAC7 445 aa9.24□□□□□ -0.93
PTP4A1-202ENST00000470661 BRD4O60885 1362 aaPredicted RBP9.24□□□□□ -0.93
PTP4A1-202ENST00000470661 NFAT5O94916 1531 aa9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 DHX15O43143 795 aaKnown RBP9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 GAS2O43903 313 aaKnown RBP9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 PAGE1O75459 146 aa9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 ERCC3P19447 782 aa9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 TNNT2P45379 298 aaPredicted RBP9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 PSMD2Q13200 908 aa9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 CNGB1Q14028 1251 aaPredicted RBP9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 UVSSAQ2YD98 709 aa9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 AKAP4Q5JQC9 854 aa9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 USHBP1Q8N6Y0 703 aa9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 COG3Q96JB2 828 aa9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 MYRFLQ96LU7 910 aa9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 NECAB3Q96P71 396 aaPredicted RBP9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 RAD18Q9NS91 495 aa9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 PPM1HQ9ULR3 514 aa9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 AK5Q9Y6K8 562 aa9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 MAP3K19Q56UN5 1328 aa9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 WDR17Q8IZU2 1322 aa9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 USP31Q70CQ4 1352 aa9.23□□□□□ -0.93
PTP4A1-202ENST00000470661 BLMP54132 1417 aaPredicted RBP9.22□□□□□ -0.93
PTP4A1-202ENST00000470661 EDC4Q6P2E9 1401 aaKnown RBP9.22□□□□□ -0.93
PTP4A1-202ENST00000470661 MON2Q7Z3U7 1717 aa9.22□□□□□ -0.93
PTP4A1-202ENST00000470661 ENC1O14682 589 aa9.22□□□□□ -0.93
PTP4A1-202ENST00000470661 KCNQ2O43526 872 aa9.22□□□□□ -0.93
PTP4A1-202ENST00000470661 GSTP1P09211 210 aaKnown RBP9.22□□□□□ -0.93
PTP4A1-202ENST00000470661 ADH5P11766 374 aa9.22□□□□□ -0.93
PTP4A1-202ENST00000470661 BMP3P12645 472 aa9.22□□□□□ -0.93
PTP4A1-202ENST00000470661 SGO2Q562F6 1265 aa9.22□□□□□ -0.93
PTP4A1-202ENST00000470661 PRSS36Q5K4E3 855 aa9.22□□□□□ -0.93
PTP4A1-202ENST00000470661 FAM196AQ6ZSG2 479 aa9.22□□□□□ -0.93
PTP4A1-202ENST00000470661 WDR89Q96FK6 387 aaPredicted RBP9.22□□□□□ -0.93
PTP4A1-202ENST00000470661 ACSBG1Q96GR2 724 aa9.22□□□□□ -0.93
PTP4A1-202ENST00000470661 PUS7Q96PZ0 661 aaKnown RBP9.22□□□□□ -0.93
PTP4A1-202ENST00000470661 CEP44Q9C0F1 390 aa9.22□□□□□ -0.93
PTP4A1-202ENST00000470661 TTF2Q9UNY4 1162 aaKnown RBP9.22□□□□□ -0.93
PTP4A1-202ENST00000470661 CRB1P82279 1406 aa9.22□□□□□ -0.93
PTP4A1-202ENST00000470661 THSD7AQ9UPZ6 1657 aa9.21□□□□□ -0.93
PTP4A1-202ENST00000470661 PPM1GO15355 546 aaPredicted RBP9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 CELA3AP09093 270 aa9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 LIG1P18858 919 aa9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 AMPHP49418 695 aa9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 MFAP1P55081 439 aaKnown RBP9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 DAB2P98082 770 aa9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 SOX4Q06945 474 aaPredicted RBP9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 DDB1Q16531 1140 aa9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 HSP90AB2PQ58FF8 381 aa9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 HP1BP3Q5SSJ5 553 aaPredicted RBP9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 PDZD3Q86UT5 571 aa9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 FAM20CQ8IXL6 584 aa9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 C2CD4AQ8NCU7 369 aaPredicted RBP9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 IP6K1Q92551 441 aa9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 KCNB2Q92953 911 aa9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 WDR18Q9BV38 432 aa9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 KCNF1Q9H3M0 494 aa9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 RAXQ9Y2V3 346 aa9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 CLSPNQ9HAW4 1339 aa9.21□□□□□ -0.94
PTP4A1-202ENST00000470661 ZNF862O60290 1169 aa9.2□□□□□ -0.94
PTP4A1-202ENST00000470661 AOC2O75106 756 aa9.2□□□□□ -0.94
PTP4A1-202ENST00000470661 NME2P22392 152 aa9.2□□□□□ -0.94
PTP4A1-202ENST00000470661 ARNTP27540 789 aa9.2□□□□□ -0.94
PTP4A1-202ENST00000470661 HOXC9P31274 260 aa9.2□□□□□ -0.94
PTP4A1-202ENST00000470661 R3HDM1Q15032 1099 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms