RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 TXNRD2Q9NNW7 524 aa16.84■□□□□ 0.29
TOP3B-215ENST00000470338 ZMYM6O95789 1325 aa16.84■□□□□ 0.29
TOP3B-215ENST00000470338 CCDC171Q6TFL3 1326 aa16.84■□□□□ 0.29
TOP3B-215ENST00000470338 TNPO2O14787 897 aaKnown RBP16.83■□□□□ 0.28
TOP3B-215ENST00000470338 PLXNB2O15031 1838 aa16.83■□□□□ 0.28
TOP3B-215ENST00000470338 MFAP1P55081 439 aaKnown RBP16.83■□□□□ 0.28
TOP3B-215ENST00000470338 RBBP6Q7Z6E9 1792 aaKnown RBP16.83■□□□□ 0.28
TOP3B-215ENST00000470338 MYPNQ86TC9 1320 aa16.83■□□□□ 0.28
TOP3B-215ENST00000470338 GPRC5AQ8NFJ5 357 aa16.83■□□□□ 0.28
TOP3B-215ENST00000470338 NYAP2Q9P242 653 aa16.83■□□□□ 0.28
TOP3B-215ENST00000470338 GABRQQ9UN88 632 aa16.83■□□□□ 0.28
TOP3B-215ENST00000470338 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.83■□□□□ 0.28
TOP3B-215ENST00000470338 KIAA0100Q14667 2235 aaKnown RBP16.82■□□□□ 0.28
TOP3B-215ENST00000470338 PLIN4Q96Q06 1357 aa16.82■□□□□ 0.28
TOP3B-215ENST00000470338 PEX10O60683 326 aa16.82■□□□□ 0.28
TOP3B-215ENST00000470338 FGRP09769 529 aa16.82■□□□□ 0.28
TOP3B-215ENST00000470338 PRKCZQ05513 592 aa16.82■□□□□ 0.28
TOP3B-215ENST00000470338 CTDSPL2Q05D32 466 aa16.82■□□□□ 0.28
TOP3B-215ENST00000470338 Q3C1V9 767 aa16.82■□□□□ 0.28
TOP3B-215ENST00000470338 SLC9C1Q4G0N8 1177 aa16.82■□□□□ 0.28
TOP3B-215ENST00000470338 CWC27Q6UX04 472 aaKnown RBP16.82■□□□□ 0.28
TOP3B-215ENST00000470338 NBPF11Q86T75 865 aa16.82■□□□□ 0.28
TOP3B-215ENST00000470338 NEDD1Q8NHV4 660 aa16.82■□□□□ 0.28
TOP3B-215ENST00000470338 DIAPH3Q9NSV4 1193 aa16.82■□□□□ 0.28
TOP3B-215ENST00000470338 RABGAP1Q9Y3P9 1069 aa16.82■□□□□ 0.28
TOP3B-215ENST00000470338 TACC3Q9Y6A5 838 aa16.82■□□□□ 0.28
TOP3B-215ENST00000470338 CNMDO75829 334 aa16.81■□□□□ 0.28
TOP3B-215ENST00000470338 ERVK-9P63128 1117 aa16.81■□□□□ 0.28
TOP3B-215ENST00000470338 ERVK-24P63145 666 aa16.81■□□□□ 0.28
TOP3B-215ENST00000470338 ATP2B2Q01814 1243 aa16.81■□□□□ 0.28
TOP3B-215ENST00000470338 COG2Q14746 738 aa16.81■□□□□ 0.28
TOP3B-215ENST00000470338 RAET1EQ8TD07 263 aa16.81■□□□□ 0.28
TOP3B-215ENST00000470338 MKL1Q969V6 931 aa16.81■□□□□ 0.28
TOP3B-215ENST00000470338 COA7Q96BR5 231 aa16.81■□□□□ 0.28
TOP3B-215ENST00000470338 ZNF333Q96JL9 665 aa16.81■□□□□ 0.28
TOP3B-215ENST00000470338 GOPCQ9HD26 462 aa16.81■□□□□ 0.28
TOP3B-215ENST00000470338 HOXC10Q9NYD6 342 aa16.81■□□□□ 0.28
TOP3B-215ENST00000470338 A0A0G2JMZ2 1700 aa16.81■□□□□ 0.28
TOP3B-215ENST00000470338 COL11A1P12107 1806 aaPredicted RBP16.8■□□□□ 0.28
TOP3B-215ENST00000470338 LAMA4Q16363 1823 aa16.8■□□□□ 0.28
TOP3B-215ENST00000470338 SPDYE16A6NNV3 312 aaPredicted RBP16.8■□□□□ 0.28
TOP3B-215ENST00000470338 WDR46O15213 610 aaKnown RBP16.8■□□□□ 0.28
TOP3B-215ENST00000470338 ORC4O43929 436 aa16.8■□□□□ 0.28
TOP3B-215ENST00000470338 FLT3LGP49771 235 aa16.8■□□□□ 0.28
TOP3B-215ENST00000470338 SOX10P56693 466 aa16.8■□□□□ 0.28
TOP3B-215ENST00000470338 TFAP4Q01664 338 aa16.8■□□□□ 0.28
TOP3B-215ENST00000470338 IRF5Q13568 498 aa16.8■□□□□ 0.28
TOP3B-215ENST00000470338 CENPQQ7L2Z9 268 aaPredicted RBP16.8■□□□□ 0.28
TOP3B-215ENST00000470338 SPICE1Q8N0Z3 855 aa16.8■□□□□ 0.28
TOP3B-215ENST00000470338 CEP95Q96GE4 821 aa16.8■□□□□ 0.28
TOP3B-215ENST00000470338 PAGR1Q9BTK6 254 aa16.8■□□□□ 0.28
TOP3B-215ENST00000470338 INCENPQ9NQS7 918 aa16.8■□□□□ 0.28
TOP3B-215ENST00000470338 MTMR4Q9NYA4 1195 aa16.8■□□□□ 0.28
TOP3B-215ENST00000470338 CLIP2Q9UDT6 1046 aa16.8■□□□□ 0.28
TOP3B-215ENST00000470338 GJD2Q9UKL4 321 aa16.8■□□□□ 0.28
TOP3B-215ENST00000470338 TSPY3P0CV98 308 aa16.79■□□□□ 0.28
TOP3B-215ENST00000470338 TSPY8P0CW00 308 aa16.79■□□□□ 0.28
TOP3B-215ENST00000470338 MAPK4P31152 587 aa16.79■□□□□ 0.28
TOP3B-215ENST00000470338 GRK4P32298 578 aa16.79■□□□□ 0.28
TOP3B-215ENST00000470338 DSG3P32926 999 aa16.79■□□□□ 0.28
TOP3B-215ENST00000470338 FAM47AQ5JRC9 791 aa16.79■□□□□ 0.28
TOP3B-215ENST00000470338 SH3TC2Q8TF17 1288 aa16.79■□□□□ 0.28
TOP3B-215ENST00000470338 TANGO6Q9C0B7 1094 aa16.79■□□□□ 0.28
TOP3B-215ENST00000470338 BTBD7Q9P203 1132 aa16.79■□□□□ 0.28
TOP3B-215ENST00000470338 SYNPO2Q9UMS6 1093 aa16.79■□□□□ 0.28
TOP3B-215ENST00000470338 TTLL1O95922 423 aa16.78■□□□□ 0.28
TOP3B-215ENST00000470338 PXYLP1Q8TE99 480 aa16.78■□□□□ 0.28
TOP3B-215ENST00000470338 PORCNQ9H237 461 aa16.78■□□□□ 0.28
TOP3B-215ENST00000470338 BRCA2P51587 3418 aa16.77■□□□□ 0.28
TOP3B-215ENST00000470338 ZNFX1Q9P2E3 1918 aaKnown RBP16.77■□□□□ 0.28
TOP3B-215ENST00000470338 F5H6K3 240 aa16.77■□□□□ 0.28
TOP3B-215ENST00000470338 TNRC18O15417 2968 aaPredicted RBP16.77■□□□□ 0.28
TOP3B-215ENST00000470338 ADCY3O60266 1144 aa16.77■□□□□ 0.28
TOP3B-215ENST00000470338 FLOT1O75955 427 aa16.77■□□□□ 0.28
TOP3B-215ENST00000470338 CCNA1P78396 465 aa16.77■□□□□ 0.28
TOP3B-215ENST00000470338 KLRC3Q07444 240 aa16.77■□□□□ 0.28
TOP3B-215ENST00000470338 MB21D1Q8N884 522 aa16.77■□□□□ 0.28
TOP3B-215ENST00000470338 SLAIN1Q8ND83 568 aa16.77■□□□□ 0.28
TOP3B-215ENST00000470338 DSCC1Q9BVC3 393 aa16.77■□□□□ 0.28
TOP3B-215ENST00000470338 NBPF3Q9H094 633 aa16.77■□□□□ 0.28
TOP3B-215ENST00000470338 IL25Q9H293 177 aa16.77■□□□□ 0.28
TOP3B-215ENST00000470338 IL17RBQ9NRM6 502 aa16.77■□□□□ 0.28
TOP3B-215ENST00000470338 ADAMTS5Q9UNA0 930 aa16.77■□□□□ 0.28
TOP3B-215ENST00000470338 TSPY2A6NKD2 308 aa16.76■□□□□ 0.27
TOP3B-215ENST00000470338 PCP11498 1178 aaKnown RBP16.76■□□□□ 0.27
TOP3B-215ENST00000470338 CHMLP26374 656 aa16.76■□□□□ 0.27
TOP3B-215ENST00000470338 NOVP48745 357 aa16.76■□□□□ 0.27
TOP3B-215ENST00000470338 HAND2P61296 217 aa16.76■□□□□ 0.27
TOP3B-215ENST00000470338 PPP4R3BQ5MIZ7 849 aa16.76■□□□□ 0.27
TOP3B-215ENST00000470338 FAM83BQ5T0W9 1011 aa16.76■□□□□ 0.27
TOP3B-215ENST00000470338 GMCL1P1Q8NEA9 526 aa16.76■□□□□ 0.27
TOP3B-215ENST00000470338 RAD50Q92878 1312 aa16.75■□□□□ 0.27
TOP3B-215ENST00000470338 POTEFA5A3E0 1075 aa16.75■□□□□ 0.27
TOP3B-215ENST00000470338 RANBP6O60518 1105 aaKnown RBP16.75■□□□□ 0.27
TOP3B-215ENST00000470338 NDUFB10O96000 172 aa16.75■□□□□ 0.27
TOP3B-215ENST00000470338 AKNAD1Q5T1N1 836 aa16.75■□□□□ 0.27
TOP3B-215ENST00000470338 GPR142Q7Z601 462 aa16.75■□□□□ 0.27
TOP3B-215ENST00000470338 PLEKHH3Q7Z736 793 aa16.75■□□□□ 0.27
TOP3B-215ENST00000470338 CCAR1Q8IX12 1150 aaKnown RBP16.75■□□□□ 0.27
TOP3B-215ENST00000470338 STAG1Q8WVM7 1258 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms