RNA–Protein interactions for RNA: ENST00000470095.5

HPS1-209, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-209ENST00000470095 A0A1W2PRG0 241 aa16.59■□□□□ 0.25
HPS1-209ENST00000470095 PTPDC1A2A3K4 754 aa16.59■□□□□ 0.25
HPS1-209ENST00000470095 DHX16O60231 1041 aaKnown RBP16.59■□□□□ 0.25
HPS1-209ENST00000470095 SNHG28P0DPA3 235 aa16.59■□□□□ 0.25
HPS1-209ENST00000470095 ATP2B2Q01814 1243 aa16.59■□□□□ 0.25
HPS1-209ENST00000470095 PPP2R5BQ15173 497 aa16.59■□□□□ 0.25
HPS1-209ENST00000470095 NOL9Q5SY16 702 aaKnown RBP16.59■□□□□ 0.25
HPS1-209ENST00000470095 CCDC84Q86UT8 332 aaPredicted RBP16.59■□□□□ 0.25
HPS1-209ENST00000470095 SCYL3Q8IZE3 742 aa16.59■□□□□ 0.25
HPS1-209ENST00000470095 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.59■□□□□ 0.25
HPS1-209ENST00000470095 CHMP4CQ96CF2 233 aa16.59■□□□□ 0.25
HPS1-209ENST00000470095 CWC22Q9HCG8 908 aaKnown RBP16.59■□□□□ 0.25
HPS1-209ENST00000470095 RBM28Q9NW13 759 aaKnown RBP16.59■□□□□ 0.25
HPS1-209ENST00000470095 SYNPO2Q9UMS6 1093 aa16.59■□□□□ 0.25
HPS1-209ENST00000470095 SMC3Q9UQE7 1217 aa16.59■□□□□ 0.25
HPS1-209ENST00000470095 CCDC196A0A1B0GTZ2 297 aa16.58■□□□□ 0.24
HPS1-209ENST00000470095 CPLX1O14810 134 aa16.58■□□□□ 0.24
HPS1-209ENST00000470095 PLEKHA8P1O95397 391 aa16.58■□□□□ 0.24
HPS1-209ENST00000470095 PDHBP11177 359 aa16.58■□□□□ 0.24
HPS1-209ENST00000470095 GJB2P29033 226 aa16.58■□□□□ 0.24
HPS1-209ENST00000470095 FUT2Q10981 343 aa16.58■□□□□ 0.24
HPS1-209ENST00000470095 TMTC3Q6ZXV5 915 aa16.58■□□□□ 0.24
HPS1-209ENST00000470095 CTCFLQ8NI51 663 aaPredicted RBP16.58■□□□□ 0.24
HPS1-209ENST00000470095 ACER1Q8TDN7 264 aa16.58■□□□□ 0.24
HPS1-209ENST00000470095 MAD2L2Q9UI95 211 aa16.58■□□□□ 0.24
HPS1-209ENST00000470095 PALM3A6NDB9 673 aaPredicted RBP16.57■□□□□ 0.24
HPS1-209ENST00000470095 TRAF5O00463 557 aa16.57■□□□□ 0.24
HPS1-209ENST00000470095 FDPSP14324 419 aaKnown RBP16.57■□□□□ 0.24
HPS1-209ENST00000470095 IFNAR1P17181 557 aa16.57■□□□□ 0.24
HPS1-209ENST00000470095 NF2P35240 595 aa16.57■□□□□ 0.24
HPS1-209ENST00000470095 ECE1P42892 770 aa16.57■□□□□ 0.24
HPS1-209ENST00000470095 PRKG1Q13976 671 aa16.57■□□□□ 0.24
HPS1-209ENST00000470095 SLC35G1Q2M3R5 365 aa16.57■□□□□ 0.24
HPS1-209ENST00000470095 NBPF11Q86T75 865 aa16.57■□□□□ 0.24
HPS1-209ENST00000470095 STAG2Q8N3U4 1231 aa16.57■□□□□ 0.24
HPS1-209ENST00000470095 GMCL1P1Q8NEA9 526 aa16.57■□□□□ 0.24
HPS1-209ENST00000470095 ZKSCAN4Q969J2 545 aaPredicted RBP16.57■□□□□ 0.24
HPS1-209ENST00000470095 ARHGEF10LQ9HCE6 1279 aa16.57■□□□□ 0.24
HPS1-209ENST00000470095 MTMR7Q9Y216 660 aa16.57■□□□□ 0.24
HPS1-209ENST00000470095 TMX2Q9Y320 296 aa16.57■□□□□ 0.24
HPS1-209ENST00000470095 MYH6P13533 1939 aa16.57■□□□□ 0.24
HPS1-209ENST00000470095 CNTNAP5Q8WYK1 1306 aa16.56■□□□□ 0.24
HPS1-209ENST00000470095 STK36Q9NRP7 1315 aa16.56■□□□□ 0.24
HPS1-209ENST00000470095 USP17L5A8MUK1 530 aa16.56■□□□□ 0.24
HPS1-209ENST00000470095 PPFIA3O75145 1194 aa16.56■□□□□ 0.24
HPS1-209ENST00000470095 KIF5BP33176 963 aa16.56■□□□□ 0.24
HPS1-209ENST00000470095 MAP3K9P80192 1104 aa16.56■□□□□ 0.24
HPS1-209ENST00000470095 HMGN5P82970 282 aaKnown RBP16.56■□□□□ 0.24
HPS1-209ENST00000470095 FMR1Q06787 632 aaKnown RBP eCLIP16.56■□□□□ 0.24
HPS1-209ENST00000470095 MAP3K11Q16584 847 aa16.56■□□□□ 0.24
HPS1-209ENST00000470095 CPLX2Q6PUV4 134 aaKnown RBP16.56■□□□□ 0.24
HPS1-209ENST00000470095 USP17L2Q6R6M4 530 aa16.56■□□□□ 0.24
HPS1-209ENST00000470095 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.56■□□□□ 0.24
HPS1-209ENST00000470095 CMTR1Q8N1G2 835 aaKnown RBP16.56■□□□□ 0.24
HPS1-209ENST00000470095 DDX11Q96FC9 970 aa16.56■□□□□ 0.24
HPS1-209ENST00000470095 CIZ1Q9ULV3 898 aaPredicted RBP16.56■□□□□ 0.24
HPS1-209ENST00000470095 SNCAIPQ9Y6H5 919 aa16.56■□□□□ 0.24
HPS1-209ENST00000470095 PPP1R12BO60237 982 aaPredicted RBP16.55■□□□□ 0.24
HPS1-209ENST00000470095 CDKL5O76039 1030 aa16.55■□□□□ 0.24
HPS1-209ENST00000470095 FMNL1O95466 1100 aaPredicted RBP16.55■□□□□ 0.24
HPS1-209ENST00000470095 NDUFB10O96000 172 aa16.55■□□□□ 0.24
HPS1-209ENST00000470095 PARP1P09874 1014 aaKnown RBP16.55■□□□□ 0.24
HPS1-209ENST00000470095 PTPRAP18433 802 aa16.55■□□□□ 0.24
HPS1-209ENST00000470095 ZNF543Q08ER8 600 aa16.55■□□□□ 0.24
HPS1-209ENST00000470095 VGLL4Q14135 290 aa16.55■□□□□ 0.24
HPS1-209ENST00000470095 KIAA1755Q5JYT7 1200 aa16.55■□□□□ 0.24
HPS1-209ENST00000470095 MOB2Q70IA6 237 aa16.55■□□□□ 0.24
HPS1-209ENST00000470095 SRBD1Q8N5C6 995 aaKnown RBP16.55■□□□□ 0.24
HPS1-209ENST00000470095 PHKBQ93100 1093 aa16.55■□□□□ 0.24
HPS1-209ENST00000470095 FRMPD2Q68DX3 1309 aaPredicted RBP16.54■□□□□ 0.24
HPS1-209ENST00000470095 F5H6K3 240 aa16.54■□□□□ 0.24
HPS1-209ENST00000470095 GOLGA8HP0CJ92 632 aa16.54■□□□□ 0.24
HPS1-209ENST00000470095 IREB2P48200 963 aaKnown RBP16.54■□□□□ 0.24
HPS1-209ENST00000470095 GNAQP50148 359 aa16.54■□□□□ 0.24
HPS1-209ENST00000470095 KLRC3Q07444 240 aa16.54■□□□□ 0.24
HPS1-209ENST00000470095 ASPRV1Q53RT3 343 aa16.54■□□□□ 0.24
HPS1-209ENST00000470095 SLFN13Q68D06 897 aa16.54■□□□□ 0.24
HPS1-209ENST00000470095 DCAF4Q8WV16 495 aa16.54■□□□□ 0.24
HPS1-209ENST00000470095 GMCL1Q96IK5 515 aa16.54■□□□□ 0.24
HPS1-209ENST00000470095 WDR18Q9BV38 432 aa16.54■□□□□ 0.24
HPS1-209ENST00000470095 PICK1Q9NRD5 415 aa16.54■□□□□ 0.24
HPS1-209ENST00000470095 CHMP5Q9NZZ3 219 aa16.54■□□□□ 0.24
HPS1-209ENST00000470095 ORC3Q9UBD5 711 aaPredicted RBP16.54■□□□□ 0.24
HPS1-209ENST00000470095 BAZ2BQ9UIF8 2168 aaKnown RBP16.54■□□□□ 0.24
HPS1-209ENST00000470095 PTPRFP10586 1907 aa16.53■□□□□ 0.24
HPS1-209ENST00000470095 TRPM7Q96QT4 1865 aa16.53■□□□□ 0.24
HPS1-209ENST00000470095 KLRF2D3W0D1 207 aa16.53■□□□□ 0.24
HPS1-209ENST00000470095 UBE2Q2LH0YL09 131 aa16.53■□□□□ 0.24
HPS1-209ENST00000470095 CYTH3O43739 400 aa16.53■□□□□ 0.24
HPS1-209ENST00000470095 PKP1Q13835 747 aa16.53■□□□□ 0.24
HPS1-209ENST00000470095 CHADLQ6NUI6 762 aa16.53■□□□□ 0.24
HPS1-209ENST00000470095 SLC26A6Q9BXS9 759 aa16.53■□□□□ 0.24
HPS1-209ENST00000470095 RNF26Q9BY78 433 aaPredicted RBP16.53■□□□□ 0.24
HPS1-209ENST00000470095 KIAA1683Q9H0B3 1180 aa16.53■□□□□ 0.24
HPS1-209ENST00000470095 SH2D4AQ9H788 454 aa16.53■□□□□ 0.24
HPS1-209ENST00000470095 VCPKMTQ9H867 229 aa16.53■□□□□ 0.24
HPS1-209ENST00000470095 ITGBL1O95965 494 aaPredicted RBP16.52■□□□□ 0.24
HPS1-209ENST00000470095 SLC1A4P43007 532 aa16.52■□□□□ 0.24
HPS1-209ENST00000470095 SSRP1Q08945 709 aaKnown RBP16.52■□□□□ 0.24
HPS1-209ENST00000470095 CCDC96Q2M329 555 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms