RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.08□□□□□ -0.64
SHROOM3-203ENST00000469923 CHMP4BQ9H444 224 aaKnown RBP11.08□□□□□ -0.64
SHROOM3-203ENST00000469923 PNMA3Q9UL41 463 aa11.08□□□□□ -0.64
SHROOM3-203ENST00000469923 DDX60LQ5H9U9 1706 aaKnown RBP11.07□□□□□ -0.64
SHROOM3-203ENST00000469923 PATL2C9JE40 543 aaKnown RBP11.07□□□□□ -0.64
SHROOM3-203ENST00000469923 COBLO75128 1261 aa11.07□□□□□ -0.64
SHROOM3-203ENST00000469923 SGPL1O95470 568 aa11.07□□□□□ -0.64
SHROOM3-203ENST00000469923 APPP05067 770 aa11.07□□□□□ -0.64
SHROOM3-203ENST00000469923 GJA8P48165 433 aa11.07□□□□□ -0.64
SHROOM3-203ENST00000469923 PRMT2P55345 433 aa11.07□□□□□ -0.64
SHROOM3-203ENST00000469923 SNAP25P60880 206 aa11.07□□□□□ -0.64
SHROOM3-203ENST00000469923 CACNB2Q08289 660 aaPredicted RBP11.07□□□□□ -0.64
SHROOM3-203ENST00000469923 HDAC1Q13547 482 aaPredicted RBP11.07□□□□□ -0.64
SHROOM3-203ENST00000469923 IRF5Q13568 498 aa11.07□□□□□ -0.64
SHROOM3-203ENST00000469923 COA7Q96BR5 231 aa11.07□□□□□ -0.64
SHROOM3-203ENST00000469923 MOV10L1Q9BXT6 1211 aaKnown RBP11.07□□□□□ -0.64
SHROOM3-203ENST00000469923 STAP2Q9UGK3 403 aa11.07□□□□□ -0.64
SHROOM3-203ENST00000469923 DDX49Q9Y6V7 483 aaKnown RBP11.07□□□□□ -0.64
SHROOM3-203ENST00000469923 LOC285556D6RIA3 1793 aa11.07□□□□□ -0.64
SHROOM3-203ENST00000469923 IGKV6D-41A0A0C4DH26 115 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 A0A0D9SFI3 127 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 RAD21O60216 631 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 IGSF3O75054 1194 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 PDE4AP27815 886 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 DSG3P32926 999 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 PABPC4Q13310 644 aaKnown RBP eCLIP11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 TMEM132BQ14DG7 1078 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 SBK1Q52WX2 424 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 FAM83BQ5T0W9 1011 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 WDR78Q5VTH9 848 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 ANO1Q5XXA6 986 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 LHX8Q68G74 356 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 TMEM179Q6ZVK1 233 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 PLEKHH3Q7Z736 793 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 ZNF589Q86UQ0 364 aaPredicted RBP11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 PLEKHM2Q8IWE5 1019 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 SLAIN1Q8ND83 568 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 PXYLP1Q8TE99 480 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 PAWRQ96IZ0 340 aaKnown RBP11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 FSD1Q9BTV5 496 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 TANGO6Q9C0B7 1094 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 IL25Q9H293 177 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 PAK6Q9NQU5 681 aaPredicted RBP11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 GINM1Q9NU53 330 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 CLIP2Q9UDT6 1046 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 COLQQ9Y215 455 aaPredicted RBP11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 TMX2Q9Y320 296 aa11.06□□□□□ -0.64
SHROOM3-203ENST00000469923 CYP2C19P33261 490 aa11.05□□□□□ -0.64
SHROOM3-203ENST00000469923 ICA1Q05084 483 aa11.05□□□□□ -0.64
SHROOM3-203ENST00000469923 NMIQ13287 307 aaPredicted RBP11.05□□□□□ -0.64
SHROOM3-203ENST00000469923 COG2Q14746 738 aa11.05□□□□□ -0.64
SHROOM3-203ENST00000469923 PRPF38BQ5VTL8 546 aaKnown RBP11.05□□□□□ -0.64
SHROOM3-203ENST00000469923 LBX2Q6XYB7 198 aa11.05□□□□□ -0.64
SHROOM3-203ENST00000469923 DPF3Q92784 378 aa11.05□□□□□ -0.64
SHROOM3-203ENST00000469923 TBC1D2Q9BYX2 928 aa11.05□□□□□ -0.64
SHROOM3-203ENST00000469923 NBPF3Q9H094 633 aa11.05□□□□□ -0.64
SHROOM3-203ENST00000469923 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.05□□□□□ -0.64
SHROOM3-203ENST00000469923 VCPKMTQ9H867 229 aa11.05□□□□□ -0.64
SHROOM3-203ENST00000469923 RABGAP1Q9Y3P9 1069 aa11.05□□□□□ -0.64
SHROOM3-203ENST00000469923 RIPK3Q9Y572 518 aa11.05□□□□□ -0.64
SHROOM3-203ENST00000469923 RLFQ13129 1914 aa11.05□□□□□ -0.64
SHROOM3-203ENST00000469923 LAMA3Q16787 3333 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 NAV1Q8NEY1 1877 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 GLRX3O76003 335 aaKnown RBP11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 NDUFB10O96000 172 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 IGHA2P01877 340 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 PGK2P07205 417 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 PRKAR2AP13861 404 aaKnown RBP11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 ERCC3P19447 782 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 PTPREP23469 700 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 IRX5P78411 483 aaPredicted RBP11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 PLS1Q14651 629 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 MAP3K21Q5TCX8 1036 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 ZSCAN25Q6NSZ9 544 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 CERS3Q8IU89 383 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 SMC5Q8IY18 1101 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 LRRC47Q8N1G4 583 aaKnown RBP11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 REPS2Q8NFH8 660 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 CEP95Q96GE4 821 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 CRISPLD2Q9H0B8 497 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 MKNK2Q9HBH9 465 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 IL17RBQ9NRM6 502 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 SWAP70Q9UH65 585 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 TTC41PQ6P2S7 1318 aa11.04□□□□□ -0.64
SHROOM3-203ENST00000469923 LAMA2P24043 3122 aaKnown RBP11.03□□□□□ -0.64
SHROOM3-203ENST00000469923 F5H6K3 240 aa11.03□□□□□ -0.64
SHROOM3-203ENST00000469923 FLOT1O75955 427 aa11.03□□□□□ -0.64
SHROOM3-203ENST00000469923 PTGS1P23219 599 aa11.03□□□□□ -0.64
SHROOM3-203ENST00000469923 SLC4A3P48751 1232 aa11.03□□□□□ -0.64
SHROOM3-203ENST00000469923 TDO2P48775 406 aa11.03□□□□□ -0.64
SHROOM3-203ENST00000469923 USP14P54578 494 aa11.03□□□□□ -0.64
SHROOM3-203ENST00000469923 HAND2P61296 217 aa11.03□□□□□ -0.64
SHROOM3-203ENST00000469923 UBXN2AP68543 259 aa11.03□□□□□ -0.64
SHROOM3-203ENST00000469923 TFAP4Q01664 338 aa11.03□□□□□ -0.64
SHROOM3-203ENST00000469923 KLRC3Q07444 240 aa11.03□□□□□ -0.64
SHROOM3-203ENST00000469923 MAP2K5Q13163 448 aa11.03□□□□□ -0.64
SHROOM3-203ENST00000469923 NUDT12Q9BQG2 462 aa11.03□□□□□ -0.64
SHROOM3-203ENST00000469923 SPATC1LQ9H0A9 340 aa11.03□□□□□ -0.64
SHROOM3-203ENST00000469923 FARP2O94887 1054 aaPredicted RBP11.02□□□□□ -0.65
SHROOM3-203ENST00000469923 FGAP02671 866 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms