RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 TPX2Q9ULW0 747 aaKnown RBP6.24□□□□□ -1.41
VPS8-220ENST00000469713 PDPK1O15530 556 aa6.23□□□□□ -1.41
VPS8-220ENST00000469713 BBS9Q3SYG4 887 aa6.23□□□□□ -1.41
VPS8-220ENST00000469713 AXDND1Q5T1B0 1012 aaPredicted RBP6.23□□□□□ -1.41
VPS8-220ENST00000469713 NBPF12Q5TAG4 269 aaPredicted RBP6.23□□□□□ -1.41
VPS8-220ENST00000469713 RNF43Q68DV7 783 aa6.23□□□□□ -1.41
VPS8-220ENST00000469713 OGFOD3Q6PK18 319 aa6.23□□□□□ -1.41
VPS8-220ENST00000469713 FAM214BQ7L5A3 538 aa6.23□□□□□ -1.41
VPS8-220ENST00000469713 NOP9Q86U38 636 aaKnown RBP6.23□□□□□ -1.41
VPS8-220ENST00000469713 GIMAP7Q8NHV1 300 aa6.23□□□□□ -1.41
VPS8-220ENST00000469713 VWCEQ96DN2 955 aa6.23□□□□□ -1.41
VPS8-220ENST00000469713 LRRN2O75325 713 aa6.22□□□□□ -1.41
VPS8-220ENST00000469713 F13BP05160 661 aa6.22□□□□□ -1.41
VPS8-220ENST00000469713 RNF4P78317 190 aa6.22□□□□□ -1.41
VPS8-220ENST00000469713 DCAF15Q66K64 600 aa6.22□□□□□ -1.41
VPS8-220ENST00000469713 ZNF746Q6NUN9 644 aaPredicted RBP6.22□□□□□ -1.41
VPS8-220ENST00000469713 ZNF765Q7L2R6 523 aa6.22□□□□□ -1.41
VPS8-220ENST00000469713 LRP10Q7Z4F1 713 aa6.22□□□□□ -1.41
VPS8-220ENST00000469713 CCDC144CPQ8IYA2 1237 aa6.22□□□□□ -1.41
VPS8-220ENST00000469713 Q8N3U1 123 aa6.22□□□□□ -1.41
VPS8-220ENST00000469713 RNF141Q8WVD5 230 aa6.22□□□□□ -1.41
VPS8-220ENST00000469713 HEXIM2Q96MH2 286 aaKnown RBP6.22□□□□□ -1.41
VPS8-220ENST00000469713 ASPNQ9BXN1 380 aa6.22□□□□□ -1.41
VPS8-220ENST00000469713 MKRN2Q9H000 416 aaKnown RBP6.22□□□□□ -1.41
VPS8-220ENST00000469713 PRDM5Q9NQX1 630 aaPredicted RBP6.22□□□□□ -1.41
VPS8-220ENST00000469713 SUSD5O60279 629 aa6.21□□□□□ -1.42
VPS8-220ENST00000469713 FURINP09958 794 aa6.21□□□□□ -1.42
VPS8-220ENST00000469713 CYP7A1P22680 504 aa6.21□□□□□ -1.42
VPS8-220ENST00000469713 NFIAQ12857 509 aa6.21□□□□□ -1.42
VPS8-220ENST00000469713 RASGRF1Q13972 1273 aa6.21□□□□□ -1.42
VPS8-220ENST00000469713 SFRP5Q5T4F7 317 aa6.21□□□□□ -1.42
VPS8-220ENST00000469713 SMARCC1Q92922 1105 aaPredicted RBP6.21□□□□□ -1.42
VPS8-220ENST00000469713 HAUS7Q99871 368 aa6.21□□□□□ -1.42
VPS8-220ENST00000469713 SUSD2Q9UGT4 822 aa6.21□□□□□ -1.42
VPS8-220ENST00000469713 SHROOM4Q9ULL8 1493 aa6.21□□□□□ -1.42
VPS8-220ENST00000469713 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.2□□□□□ -1.42
VPS8-220ENST00000469713 PRR33A8MZF0 331 aa6.2□□□□□ -1.42
VPS8-220ENST00000469713 CBFA2T2O43439 604 aa6.2□□□□□ -1.42
VPS8-220ENST00000469713 SMARCA5O60264 1052 aaPredicted RBP6.2□□□□□ -1.42
VPS8-220ENST00000469713 CBX7O95931 251 aa6.2□□□□□ -1.42
VPS8-220ENST00000469713 EPHX1P07099 455 aa6.2□□□□□ -1.42
VPS8-220ENST00000469713 FSTP19883 344 aa6.2□□□□□ -1.42
VPS8-220ENST00000469713 ITGB7P26010 798 aa6.2□□□□□ -1.42
VPS8-220ENST00000469713 IFRD2Q12894 506 aaPredicted RBP6.2□□□□□ -1.42
VPS8-220ENST00000469713 RSPO4Q2I0M5 234 aaPredicted RBP6.2□□□□□ -1.42
VPS8-220ENST00000469713 CYP27C1Q4G0S4 372 aa6.2□□□□□ -1.42
VPS8-220ENST00000469713 EEPD1Q7L9B9 569 aa6.2□□□□□ -1.42
VPS8-220ENST00000469713 JAZF1Q86VZ6 243 aa6.2□□□□□ -1.42
VPS8-220ENST00000469713 FBXL18Q96ME1 805 aa6.2□□□□□ -1.42
VPS8-220ENST00000469713 DNAJC7Q99615 494 aa6.2□□□□□ -1.42
VPS8-220ENST00000469713 DBNDD2Q9BQY9 259 aa6.2□□□□□ -1.42
VPS8-220ENST00000469713 KRTAP9-2Q9BYQ4 174 aa6.2□□□□□ -1.42
VPS8-220ENST00000469713 U3KQE9 123 aa6.2□□□□□ -1.42
VPS8-220ENST00000469713 WDR64B1ANS9 1081 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 SHOXO15266 292 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 IGLV1-40P01703 118 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 H2AFB1P0C5Y9 115 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 H2AFB2P0C5Z0 115 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 CYP27A1Q02318 531 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 SNW1Q13573 536 aaKnown RBP6.19□□□□□ -1.42
VPS8-220ENST00000469713 AUHQ13825 339 aaKnown RBP6.19□□□□□ -1.42
VPS8-220ENST00000469713 NBPF9Q3BBW0 867 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 SLC10A6Q3KNW5 377 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 MTERF2Q49AM1 385 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 NKAPLQ5M9Q1 402 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 HEATR6Q6AI08 1181 aaKnown RBP6.19□□□□□ -1.42
VPS8-220ENST00000469713 SPATC1Q76KD6 591 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 C7orf61Q8IZ16 206 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 SHKBP1Q8TBC3 707 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 Q96M66 194 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 FGD4Q96M96 766 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 KLHL25Q9H0H3 589 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 GTF2IRD1Q9UHL9 959 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 PFDN2Q9UHV9 154 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 TBX22Q9Y458 520 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 ZNF451Q9Y4E5 1061 aa6.19□□□□□ -1.42
VPS8-220ENST00000469713 ANKRD34BA5PLL1 514 aa6.18□□□□□ -1.42
VPS8-220ENST00000469713 IGF2BP3O00425 579 aaKnown RBP eCLIP6.18□□□□□ -1.42
VPS8-220ENST00000469713 DIAPH1O60610 1272 aaKnown RBP6.18□□□□□ -1.42
VPS8-220ENST00000469713 DUSP27Q5VZP5 1158 aa6.18□□□□□ -1.42
VPS8-220ENST00000469713 LILRB2Q8N423 598 aa6.18□□□□□ -1.42
VPS8-220ENST00000469713 FAM181AQ8N9Y4 354 aa6.18□□□□□ -1.42
VPS8-220ENST00000469713 DTWD2Q8NBA8 298 aa6.18□□□□□ -1.42
VPS8-220ENST00000469713 ST13P5Q8NFI4 369 aaPredicted RBP6.18□□□□□ -1.42
VPS8-220ENST00000469713 OSBPL1AQ9BXW6 950 aa6.18□□□□□ -1.42
VPS8-220ENST00000469713 PRDM14Q9GZV8 571 aa6.18□□□□□ -1.42
VPS8-220ENST00000469713 ATG3Q9NT62 314 aa6.18□□□□□ -1.42
VPS8-220ENST00000469713 APEX2Q9UBZ4 518 aa6.18□□□□□ -1.42
VPS8-220ENST00000469713 ZMYM5Q9UJ78 669 aa6.18□□□□□ -1.42
VPS8-220ENST00000469713 FBXL21Q9UKT6 434 aa6.18□□□□□ -1.42
VPS8-220ENST00000469713 PCDHB12Q9Y5F1 795 aa6.18□□□□□ -1.42
VPS8-220ENST00000469713 MRPL42Q9Y6G3 142 aaKnown RBP6.18□□□□□ -1.42
VPS8-220ENST00000469713 TLDC2A0PJX2 215 aa6.17□□□□□ -1.42
VPS8-220ENST00000469713 DYRK3O43781 588 aa6.17□□□□□ -1.42
VPS8-220ENST00000469713 ZNF865P0CJ78 1059 aaPredicted RBP6.17□□□□□ -1.42
VPS8-220ENST00000469713 CD247P20963 164 aa6.17□□□□□ -1.42
VPS8-220ENST00000469713 KIR3DL1P43629 444 aa6.17□□□□□ -1.42
VPS8-220ENST00000469713 ZNF143P52747 638 aaPredicted RBP6.17□□□□□ -1.42
VPS8-220ENST00000469713 SV2CQ496J9 727 aa6.17□□□□□ -1.42
VPS8-220ENST00000469713 ANKRD39Q53RE8 183 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms