RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 RABEP2Q9H5N1 569 aa11.21□□□□□ -0.61
NUP50-214ENST00000469163 TFIP11Q9UBB9 837 aaKnown RBP11.21□□□□□ -0.61
NUP50-214ENST00000469163 GGA1Q9UJY5 639 aa11.21□□□□□ -0.61
NUP50-214ENST00000469163 ZNF804BA4D1E1 1349 aa11.21□□□□□ -0.61
NUP50-214ENST00000469163 MYO1FO00160 1098 aa11.21□□□□□ -0.62
NUP50-214ENST00000469163 EBAG9O00559 213 aa11.21□□□□□ -0.62
NUP50-214ENST00000469163 IMMTQ16891 758 aaKnown RBP11.21□□□□□ -0.62
NUP50-214ENST00000469163 FAM47AQ5JRC9 791 aa11.21□□□□□ -0.62
NUP50-214ENST00000469163 Q6ZUG5 572 aa11.21□□□□□ -0.62
NUP50-214ENST00000469163 PHC3Q8NDX5 983 aa11.21□□□□□ -0.62
NUP50-214ENST00000469163 EZH1Q92800 747 aaPredicted RBP11.21□□□□□ -0.62
NUP50-214ENST00000469163 UBXN6Q9BZV1 441 aa11.21□□□□□ -0.62
NUP50-214ENST00000469163 KCNQ5Q9NR82 932 aa11.21□□□□□ -0.62
NUP50-214ENST00000469163 SNX14Q9Y5W7 946 aa11.21□□□□□ -0.62
NUP50-214ENST00000469163 FAM169AQ9Y6X4 670 aa11.21□□□□□ -0.62
NUP50-214ENST00000469163 URI1O94763 535 aaPredicted RBP11.21□□□□□ -0.62
NUP50-214ENST00000469163 CCDC192P0DO97 292 aa11.21□□□□□ -0.62
NUP50-214ENST00000469163 CCT5P48643 541 aa11.21□□□□□ -0.62
NUP50-214ENST00000469163 EVCP57679 992 aa11.21□□□□□ -0.62
NUP50-214ENST00000469163 DDR1Q08345 913 aa11.21□□□□□ -0.62
NUP50-214ENST00000469163 ARID5BQ14865 1188 aa11.21□□□□□ -0.62
NUP50-214ENST00000469163 EXOC8Q8IYI6 725 aa11.21□□□□□ -0.62
NUP50-214ENST00000469163 RANBP17Q9H2T7 1088 aaKnown RBP11.21□□□□□ -0.62
NUP50-214ENST00000469163 A1CFQ9NQ94 594 aaKnown RBP11.21□□□□□ -0.62
NUP50-214ENST00000469163 TTC41PQ6P2S7 1318 aa11.2□□□□□ -0.62
NUP50-214ENST00000469163 RTN2O75298 545 aa11.2□□□□□ -0.62
NUP50-214ENST00000469163 CAVIN2O95810 425 aa11.2□□□□□ -0.62
NUP50-214ENST00000469163 CCDC15Q0P6D6 951 aa11.2□□□□□ -0.62
NUP50-214ENST00000469163 TRMT1LQ7Z2T5 733 aaKnown RBP11.2□□□□□ -0.62
NUP50-214ENST00000469163 POTEDQ86YR6 584 aa11.2□□□□□ -0.62
NUP50-214ENST00000469163 EZRP15311 586 aaKnown RBP11.2□□□□□ -0.62
NUP50-214ENST00000469163 ATP5JP18859 108 aa11.2□□□□□ -0.62
NUP50-214ENST00000469163 CASP7P55210 303 aa11.2□□□□□ -0.62
NUP50-214ENST00000469163 LRRFIP1Q32MZ4 808 aaKnown RBP11.2□□□□□ -0.62
NUP50-214ENST00000469163 PREPLQ4J6C6 727 aaPredicted RBP11.2□□□□□ -0.62
NUP50-214ENST00000469163 NYAP1Q6ZVC0 841 aa11.2□□□□□ -0.62
NUP50-214ENST00000469163 NLGN1Q8N2Q7 840 aa11.2□□□□□ -0.62
NUP50-214ENST00000469163 KCNV2Q8TDN2 545 aa11.2□□□□□ -0.62
NUP50-214ENST00000469163 RBM17Q96I25 401 aaKnown RBP11.2□□□□□ -0.62
NUP50-214ENST00000469163 MKNK2Q9HBH9 465 aa11.2□□□□□ -0.62
NUP50-214ENST00000469163 ZNF277Q9NRM2 450 aaPredicted RBP11.2□□□□□ -0.62
NUP50-214ENST00000469163 RIPOR2Q9Y4F9 1068 aa11.2□□□□□ -0.62
NUP50-214ENST00000469163 ABCA3Q99758 1704 aa11.2□□□□□ -0.62
NUP50-214ENST00000469163 RPS6KA5O75582 802 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 PDE6AP16499 860 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 CCDC178Q5BJE1 867 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 SPATA21Q7Z572 469 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 TGFBRAP1Q8WUH2 860 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 PLEKHG4BQ96PX9 1271 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 NEK1Q96PY6 1258 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 MTRQ99707 1265 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 CARD6Q9BX69 1037 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 IQCGQ9H095 443 aaKnown RBP11.19□□□□□ -0.62
NUP50-214ENST00000469163 USP42Q9H9J4 1324 aaKnown RBP11.19□□□□□ -0.62
NUP50-214ENST00000469163 IMPDH2P12268 514 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 CA8P35219 290 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 GRM1Q13255 1194 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 LARGE2Q8N3Y3 721 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 YIPF3Q9GZM5 350 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 CLRN2A0PK11 232 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 IFIT3O14879 490 aaKnown RBP11.19□□□□□ -0.62
NUP50-214ENST00000469163 SLC27A2O14975 620 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 PPIP5K2O43314 1243 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 PPP1R12BO60237 982 aaPredicted RBP11.19□□□□□ -0.62
NUP50-214ENST00000469163 LDHBP07195 334 aaKnown RBP11.19□□□□□ -0.62
NUP50-214ENST00000469163 GPSM2P81274 684 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 E2F5Q15329 346 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 ZYXQ15942 572 aaKnown RBP11.19□□□□□ -0.62
NUP50-214ENST00000469163 CEP85LQ5SZL2 805 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 SPTY2D1Q68D10 685 aaPredicted RBP11.19□□□□□ -0.62
NUP50-214ENST00000469163 CCDC114Q96M63 670 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 LZTS2Q9BRK4 669 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 COL18A1P39060 1754 aa11.19□□□□□ -0.62
NUP50-214ENST00000469163 ERICH2A1L162 156 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 HIP1O00291 1037 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 FGAP02671 866 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 MRPL12P52815 198 aaKnown RBP11.18□□□□□ -0.62
NUP50-214ENST00000469163 LCORLQ8N3X6 602 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 NACAP1Q9BZK3 213 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 RGS17Q9UGC6 210 aaPredicted RBP11.18□□□□□ -0.62
NUP50-214ENST00000469163 MAGEB6P1A0A0J9YX57 407 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 N4BP1O75113 896 aaKnown RBP11.18□□□□□ -0.62
NUP50-214ENST00000469163 CDR1P51861 262 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 AOC3Q16853 763 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 CCDC144BQ3MJ40 725 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 TBC1D5Q92609 795 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 HAUS7Q99871 368 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 TRIM4Q9C037 500 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 GJB4Q9NTQ9 266 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 GOLGA8BA8MQT2 603 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 LARGE1O95461 756 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 CYP21A2P08686 494 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 HSPD1P10809 573 aaKnown RBP11.18□□□□□ -0.62
NUP50-214ENST00000469163 EVX2Q03828 476 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 RABL6Q3YEC7 729 aaPredicted RBP11.18□□□□□ -0.62
NUP50-214ENST00000469163 LARP1BQ659C4 914 aaKnown RBP11.18□□□□□ -0.62
NUP50-214ENST00000469163 TAX1BP1Q86VP1 789 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 FAM200AQ8TCP9 573 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 UBAC1Q9BSL1 405 aa11.18□□□□□ -0.62
NUP50-214ENST00000469163 PPEF1O14829 653 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms