RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 CNMDO75829 334 aa13.77□□□□□ -0.21
CDHR3-205ENST00000468143 SLC34A2O95436 690 aa13.77□□□□□ -0.21
CDHR3-205ENST00000468143 SDSP20132 328 aa13.77□□□□□ -0.21
CDHR3-205ENST00000468143 ERVK-9P63128 1117 aa13.77□□□□□ -0.21
CDHR3-205ENST00000468143 ERVK-24P63145 666 aa13.77□□□□□ -0.21
CDHR3-205ENST00000468143 CTDSPL2Q05D32 466 aa13.77□□□□□ -0.21
CDHR3-205ENST00000468143 PPARAQ07869 468 aa13.77□□□□□ -0.21
CDHR3-205ENST00000468143 MCMDC2Q4G0Z9 681 aa13.77□□□□□ -0.21
CDHR3-205ENST00000468143 CCAR1Q8IX12 1150 aaKnown RBP13.77□□□□□ -0.21
CDHR3-205ENST00000468143 PORCNQ9H237 461 aa13.77□□□□□ -0.21
CDHR3-205ENST00000468143 OSBPL3Q9H4L5 887 aa13.77□□□□□ -0.21
CDHR3-205ENST00000468143 BTBD7Q9P203 1132 aa13.77□□□□□ -0.21
CDHR3-205ENST00000468143 SPDYE16A6NNV3 312 aaPredicted RBP13.76□□□□□ -0.21
CDHR3-205ENST00000468143 PDE4AP27815 886 aa13.76□□□□□ -0.21
CDHR3-205ENST00000468143 COG2Q14746 738 aa13.76□□□□□ -0.21
CDHR3-205ENST00000468143 FAM47AQ5JRC9 791 aa13.76□□□□□ -0.21
CDHR3-205ENST00000468143 SH2D4AQ9H788 454 aa13.76□□□□□ -0.21
CDHR3-205ENST00000468143 VCPKMTQ9H867 229 aa13.76□□□□□ -0.21
CDHR3-205ENST00000468143 GJD2Q9UKL4 321 aa13.76□□□□□ -0.21
CDHR3-205ENST00000468143 RABGAP1Q9Y3P9 1069 aa13.76□□□□□ -0.21
CDHR3-205ENST00000468143 ROBO3Q96MS0 1386 aa13.75□□□□□ -0.21
CDHR3-205ENST00000468143 CYP2B6P20813 491 aa13.75□□□□□ -0.21
CDHR3-205ENST00000468143 IRF5Q13568 498 aa13.75□□□□□ -0.21
CDHR3-205ENST00000468143 WDR78Q5VTH9 848 aa13.75□□□□□ -0.21
CDHR3-205ENST00000468143 ZNF589Q86UQ0 364 aaPredicted RBP13.75□□□□□ -0.21
CDHR3-205ENST00000468143 SLAIN1Q8ND83 568 aa13.75□□□□□ -0.21
CDHR3-205ENST00000468143 GTF3C2Q8WUA4 911 aaPredicted RBP13.75□□□□□ -0.21
CDHR3-205ENST00000468143 ZNF287Q9HBT7 754 aa13.75□□□□□ -0.21
CDHR3-205ENST00000468143 CWC22Q9HCG8 908 aaKnown RBP13.75□□□□□ -0.21
CDHR3-205ENST00000468143 HOXC10Q9NYD6 342 aa13.75□□□□□ -0.21
CDHR3-205ENST00000468143 CLIP2Q9UDT6 1046 aa13.75□□□□□ -0.21
CDHR3-205ENST00000468143 FLOT1O75955 427 aa13.74□□□□□ -0.21
CDHR3-205ENST00000468143 INHAP05111 366 aa13.74□□□□□ -0.21
CDHR3-205ENST00000468143 SLC3A2P08195 630 aaKnown RBP13.74□□□□□ -0.21
CDHR3-205ENST00000468143 CCL5P13501 91 aa13.74□□□□□ -0.21
CDHR3-205ENST00000468143 MAPK4P31152 587 aa13.74□□□□□ -0.21
CDHR3-205ENST00000468143 UBXN2AP68543 259 aa13.74□□□□□ -0.21
CDHR3-205ENST00000468143 TFAP4Q01664 338 aa13.74□□□□□ -0.21
CDHR3-205ENST00000468143 PDE4BQ07343 736 aa13.74□□□□□ -0.21
CDHR3-205ENST00000468143 CWC27Q6UX04 472 aaKnown RBP13.74□□□□□ -0.21
CDHR3-205ENST00000468143 GPR142Q7Z601 462 aa13.74□□□□□ -0.21
CDHR3-205ENST00000468143 PLEKHH3Q7Z736 793 aa13.74□□□□□ -0.21
CDHR3-205ENST00000468143 PXYLP1Q8TE99 480 aa13.74□□□□□ -0.21
CDHR3-205ENST00000468143 LPAR1Q92633 364 aa13.74□□□□□ -0.21
CDHR3-205ENST00000468143 NUP88Q99567 741 aaPredicted RBP13.74□□□□□ -0.21
CDHR3-205ENST00000468143 RNF208Q9H0X6 261 aa13.74□□□□□ -0.21
CDHR3-205ENST00000468143 UNC93B1Q9H1C4 597 aa13.74□□□□□ -0.21
CDHR3-205ENST00000468143 TACC3Q9Y6A5 838 aa13.74□□□□□ -0.21
CDHR3-205ENST00000468143 FGAP02671 866 aa13.73□□□□□ -0.21
CDHR3-205ENST00000468143 TSPY3P0CV98 308 aa13.73□□□□□ -0.21
CDHR3-205ENST00000468143 TSPY8P0CW00 308 aa13.73□□□□□ -0.21
CDHR3-205ENST00000468143 HSPD1P10809 573 aaKnown RBP13.73□□□□□ -0.21
CDHR3-205ENST00000468143 DSG3P32926 999 aa13.73□□□□□ -0.21
CDHR3-205ENST00000468143 TRIM32Q13049 653 aa13.73□□□□□ -0.21
CDHR3-205ENST00000468143 FAM83BQ5T0W9 1011 aa13.73□□□□□ -0.21
CDHR3-205ENST00000468143 LBX2Q6XYB7 198 aa13.73□□□□□ -0.21
CDHR3-205ENST00000468143 CHMP4CQ96CF2 233 aa13.73□□□□□ -0.21
CDHR3-205ENST00000468143 ATG4CQ96DT6 458 aa13.73□□□□□ -0.21
CDHR3-205ENST00000468143 CEP95Q96GE4 821 aa13.73□□□□□ -0.21
CDHR3-205ENST00000468143 NUDT12Q9BQG2 462 aa13.73□□□□□ -0.21
CDHR3-205ENST00000468143 GOPCQ9HD26 462 aa13.73□□□□□ -0.21
CDHR3-205ENST00000468143 FBXO28Q9NVF7 368 aa13.73□□□□□ -0.21
CDHR3-205ENST00000468143 NYAP2Q9P242 653 aa13.73□□□□□ -0.21
CDHR3-205ENST00000468143 CCDC171Q6TFL3 1326 aa13.72□□□□□ -0.21
CDHR3-205ENST00000468143 IGKV6D-41A0A0C4DH26 115 aa13.72□□□□□ -0.21
CDHR3-205ENST00000468143 F5H6K3 240 aa13.72□□□□□ -0.21
CDHR3-205ENST00000468143 WDR46O15213 610 aaKnown RBP13.72□□□□□ -0.21
CDHR3-205ENST00000468143 CCNA1P78396 465 aa13.72□□□□□ -0.21
CDHR3-205ENST00000468143 KLRC3Q07444 240 aa13.72□□□□□ -0.21
CDHR3-205ENST00000468143 PLS1Q14651 629 aa13.72□□□□□ -0.21
CDHR3-205ENST00000468143 LRRC47Q8N1G4 583 aaKnown RBP13.72□□□□□ -0.21
CDHR3-205ENST00000468143 NEDD1Q8NHV4 660 aa13.72□□□□□ -0.21
CDHR3-205ENST00000468143 DIAPH3Q9NSV4 1193 aa13.72□□□□□ -0.21
CDHR3-205ENST00000468143 MTMR4Q9NYA4 1195 aa13.72□□□□□ -0.21
CDHR3-205ENST00000468143 RANBP6O60518 1105 aaKnown RBP13.71□□□□□ -0.21
CDHR3-205ENST00000468143 NDUFB10O96000 172 aa13.71□□□□□ -0.21
CDHR3-205ENST00000468143 HAND2P61296 217 aa13.71□□□□□ -0.21
CDHR3-205ENST00000468143 ALX1Q15699 326 aa13.71□□□□□ -0.21
CDHR3-205ENST00000468143 CCL14Q16627 93 aa13.71□□□□□ -0.21
CDHR3-205ENST00000468143 TICAM2Q86XR7 235 aa13.71□□□□□ -0.21
CDHR3-205ENST00000468143 TRIB2Q92519 343 aa13.71□□□□□ -0.21
CDHR3-205ENST00000468143 MOV10L1Q9BXT6 1211 aaKnown RBP13.71□□□□□ -0.21
CDHR3-205ENST00000468143 TOMM22Q9NS69 142 aa13.71□□□□□ -0.21
CDHR3-205ENST00000468143 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.71□□□□□ -0.21
CDHR3-205ENST00000468143 MGAMO43451 1857 aa13.7□□□□□ -0.22
CDHR3-205ENST00000468143 TSPY2A6NKD2 308 aa13.7□□□□□ -0.22
CDHR3-205ENST00000468143 NMT2O60551 498 aa13.7□□□□□ -0.22
CDHR3-205ENST00000468143 TTLL1O95922 423 aa13.7□□□□□ -0.22
CDHR3-205ENST00000468143 GJB1P08034 283 aa13.7□□□□□ -0.22
CDHR3-205ENST00000468143 GSPT1P15170 499 aaKnown RBP13.7□□□□□ -0.22
CDHR3-205ENST00000468143 PTPREP23469 700 aa13.7□□□□□ -0.22
CDHR3-205ENST00000468143 RRP12Q5JTH9 1297 aaKnown RBP13.7□□□□□ -0.22
CDHR3-205ENST00000468143 MORN1Q5T089 497 aa13.7□□□□□ -0.22
CDHR3-205ENST00000468143 TTC22Q5TAA0 569 aa13.7□□□□□ -0.22
CDHR3-205ENST00000468143 SOCS4Q8WXH5 440 aa13.7□□□□□ -0.22
CDHR3-205ENST00000468143 USP6NLQ92738 828 aa13.7□□□□□ -0.22
CDHR3-205ENST00000468143 MKL1Q969V6 931 aa13.7□□□□□ -0.22
CDHR3-205ENST00000468143 SPATC1LQ9H0A9 340 aa13.7□□□□□ -0.22
CDHR3-205ENST00000468143 ANAPC4Q9UJX5 808 aa13.7□□□□□ -0.22
CDHR3-205ENST00000468143 HMGCRP04035 888 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms