RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 FAM47AQ5JRC9 791 aa16.56■□□□□ 0.24
RPP40-204ENST00000468105 ZKSCAN2Q63HK3 967 aa16.56■□□□□ 0.24
RPP40-204ENST00000468105 FEZ1Q99689 392 aa16.56■□□□□ 0.24
RPP40-204ENST00000468105 NOL10Q9BSC4 688 aaKnown RBP16.56■□□□□ 0.24
RPP40-204ENST00000468105 GNAI2P04899 355 aa16.55■□□□□ 0.24
RPP40-204ENST00000468105 MS4A1P11836 297 aa16.55■□□□□ 0.24
RPP40-204ENST00000468105 CCNA1P78396 465 aa16.55■□□□□ 0.24
RPP40-204ENST00000468105 TLE2Q04725 743 aa16.55■□□□□ 0.24
RPP40-204ENST00000468105 GRIN2CQ14957 1233 aa16.55■□□□□ 0.24
RPP40-204ENST00000468105 LRRC41Q15345 812 aa16.55■□□□□ 0.24
RPP40-204ENST00000468105 CLEC10AQ8IUN9 316 aa16.55■□□□□ 0.24
RPP40-204ENST00000468105 SIAH1Q8IUQ4 282 aa16.55■□□□□ 0.24
RPP40-204ENST00000468105 TRIM34Q9BYJ4 488 aa16.55■□□□□ 0.24
RPP40-204ENST00000468105 CCDC8Q9H0W5 538 aaPredicted RBP16.55■□□□□ 0.24
RPP40-204ENST00000468105 CWC22Q9HCG8 908 aaKnown RBP16.55■□□□□ 0.24
RPP40-204ENST00000468105 GPR108Q9NPR9 543 aa16.55■□□□□ 0.24
RPP40-204ENST00000468105 HDAC5Q9UQL6 1122 aa16.55■□□□□ 0.24
RPP40-204ENST00000468105 MSCO60682 206 aa16.54■□□□□ 0.24
RPP40-204ENST00000468105 MYCNP04198 464 aaPredicted RBP16.54■□□□□ 0.24
RPP40-204ENST00000468105 HLA-DOAP06340 250 aa16.54■□□□□ 0.24
RPP40-204ENST00000468105 ERCC3P19447 782 aa16.54■□□□□ 0.24
RPP40-204ENST00000468105 SMAD3P84022 425 aaKnown RBP16.54■□□□□ 0.24
RPP40-204ENST00000468105 GABPAQ06546 454 aa16.54■□□□□ 0.24
RPP40-204ENST00000468105 ABCB5Q2M3G0 1257 aa16.54■□□□□ 0.24
RPP40-204ENST00000468105 CERKLQ49MI3 558 aaPredicted RBP16.54■□□□□ 0.24
RPP40-204ENST00000468105 OLFML2BQ68BL8 750 aa16.54■□□□□ 0.24
RPP40-204ENST00000468105 ATF7IPQ6VMQ6 1270 aa16.54■□□□□ 0.24
RPP40-204ENST00000468105 CLUAP1Q96AJ1 413 aa16.54■□□□□ 0.24
RPP40-204ENST00000468105 LENG1Q96BZ8 264 aaPredicted RBP16.54■□□□□ 0.24
RPP40-204ENST00000468105 EAF2Q96CJ1 260 aaPredicted RBP16.54■□□□□ 0.24
RPP40-204ENST00000468105 ZNF512BQ96KM6 892 aaPredicted RBP16.54■□□□□ 0.24
RPP40-204ENST00000468105 EHD4Q9H223 541 aa16.54■□□□□ 0.24
RPP40-204ENST00000468105 C1orf115Q9H7X2 142 aa16.54■□□□□ 0.24
RPP40-204ENST00000468105 SERPINB13Q9UIV8 391 aa16.54■□□□□ 0.24
RPP40-204ENST00000468105 SEPT4O43236 478 aa16.53■□□□□ 0.24
RPP40-204ENST00000468105 GLRX3O76003 335 aaKnown RBP16.53■□□□□ 0.24
RPP40-204ENST00000468105 TAL1P17542 331 aaPredicted RBP16.53■□□□□ 0.24
RPP40-204ENST00000468105 MAGEB6Q8N7X4 407 aa16.53■□□□□ 0.24
RPP40-204ENST00000468105 FRAT1Q92837 279 aaPredicted RBP16.53■□□□□ 0.24
RPP40-204ENST00000468105 RIOK1Q9BRS2 568 aaKnown RBP16.53■□□□□ 0.24
RPP40-204ENST00000468105 SPATC1LQ9H0A9 340 aa16.53■□□□□ 0.24
RPP40-204ENST00000468105 PARP14Q460N5 1801 aa16.53■□□□□ 0.24
RPP40-204ENST00000468105 REV3LO60673 3130 aa16.53■□□□□ 0.24
RPP40-204ENST00000468105 ZNFX1Q9P2E3 1918 aaKnown RBP16.53■□□□□ 0.24
RPP40-204ENST00000468105 IDH1O75874 414 aaKnown RBP16.52■□□□□ 0.24
RPP40-204ENST00000468105 CYP2D6P10635 497 aa16.52■□□□□ 0.24
RPP40-204ENST00000468105 FOSL2P15408 326 aa16.52■□□□□ 0.24
RPP40-204ENST00000468105 IRX5P78411 483 aaPredicted RBP16.52■□□□□ 0.24
RPP40-204ENST00000468105 CCDC158Q5M9N0 1113 aa16.52■□□□□ 0.24
RPP40-204ENST00000468105 DPP9Q86TI2 863 aa16.52■□□□□ 0.24
RPP40-204ENST00000468105 SLC44A5Q8NCS7 719 aa16.52■□□□□ 0.24
RPP40-204ENST00000468105 SSH3Q8TE77 659 aa16.52■□□□□ 0.24
RPP40-204ENST00000468105 PRKAG2Q9UGJ0 569 aa16.52■□□□□ 0.24
RPP40-204ENST00000468105 IVNS1ABPQ9Y6Y0 642 aa16.52■□□□□ 0.24
RPP40-204ENST00000468105 USP5P45974 858 aa16.51■□□□□ 0.23
RPP40-204ENST00000468105 USP14P54578 494 aa16.51■□□□□ 0.23
RPP40-204ENST00000468105 C1orf53Q5VUE5 145 aa16.51■□□□□ 0.23
RPP40-204ENST00000468105 TMEM57Q8N5G2 664 aa16.51■□□□□ 0.23
RPP40-204ENST00000468105 ARRDC4Q8NCT1 418 aa16.51■□□□□ 0.23
RPP40-204ENST00000468105 ATG4CQ96DT6 458 aa16.51■□□□□ 0.23
RPP40-204ENST00000468105 MAML3Q96JK9 1138 aa16.51■□□□□ 0.23
RPP40-204ENST00000468105 PGK1P00558 417 aa16.5■□□□□ 0.23
RPP40-204ENST00000468105 NEFLP07196 543 aa16.5■□□□□ 0.23
RPP40-204ENST00000468105 ATP8B2P98198 1209 aa16.5■□□□□ 0.23
RPP40-204ENST00000468105 COG2Q14746 738 aa16.5■□□□□ 0.23
RPP40-204ENST00000468105 SLFNL1Q499Z3 407 aa16.5■□□□□ 0.23
RPP40-204ENST00000468105 CHD7Q9P2D1 2997 aa16.5■□□□□ 0.23
RPP40-204ENST00000468105 PHF24Q9UPV7 400 aa16.5■□□□□ 0.23
RPP40-204ENST00000468105 COL11A1P12107 1806 aaPredicted RBP16.49■□□□□ 0.23
RPP40-204ENST00000468105 KBTBD13C9JR72 458 aa16.49■□□□□ 0.23
RPP40-204ENST00000468105 SURF6O75683 361 aaKnown RBP16.49■□□□□ 0.23
RPP40-204ENST00000468105 PGK2P07205 417 aa16.49■□□□□ 0.23
RPP40-204ENST00000468105 DSG3P32926 999 aa16.49■□□□□ 0.23
RPP40-204ENST00000468105 C16orf59Q7L2K0 433 aa16.49■□□□□ 0.23
RPP40-204ENST00000468105 NAV1Q8NEY1 1877 aa16.49■□□□□ 0.23
RPP40-204ENST00000468105 GRXCR1A8MXD5 290 aa16.48■□□□□ 0.23
RPP40-204ENST00000468105 KIAA0355O15063 1070 aa16.48■□□□□ 0.23
RPP40-204ENST00000468105 STRNO43815 780 aa16.48■□□□□ 0.23
RPP40-204ENST00000468105 CHGBP05060 677 aa16.48■□□□□ 0.23
RPP40-204ENST00000468105 TMEM132BQ14DG7 1078 aa16.48■□□□□ 0.23
RPP40-204ENST00000468105 SPICE1Q8N0Z3 855 aa16.48■□□□□ 0.23
RPP40-204ENST00000468105 SHCBP1Q8NEM2 672 aa16.48■□□□□ 0.23
RPP40-204ENST00000468105 DYNLL2Q96FJ2 89 aa16.48■□□□□ 0.23
RPP40-204ENST00000468105 RNPC3Q96LT9 517 aaKnown RBP16.48■□□□□ 0.23
RPP40-204ENST00000468105 TANGO6Q9C0B7 1094 aa16.48■□□□□ 0.23
RPP40-204ENST00000468105 NOP58Q9Y2X3 529 aaKnown RBP16.48■□□□□ 0.23
RPP40-204ENST00000468105 XIRP2A4UGR9 3374 aa16.47■□□□□ 0.23
RPP40-204ENST00000468105 CLTBP09497 229 aa16.47■□□□□ 0.23
RPP40-204ENST00000468105 ZNF865P0CJ78 1059 aaPredicted RBP16.47■□□□□ 0.23
RPP40-204ENST00000468105 AKR1B1P15121 316 aa16.47■□□□□ 0.23
RPP40-204ENST00000468105 COL9A1P20849 921 aa16.47■□□□□ 0.23
RPP40-204ENST00000468105 PBX2P40425 430 aa16.47■□□□□ 0.23
RPP40-204ENST00000468105 FAAP100Q0VG06 881 aa16.47■□□□□ 0.23
RPP40-204ENST00000468105 TTC6Q86TZ1 520 aa16.47■□□□□ 0.23
RPP40-204ENST00000468105 NCAPG2Q86XI2 1143 aa16.47■□□□□ 0.23
RPP40-204ENST00000468105 FTSJ3Q8IY81 847 aaKnown RBP16.47■□□□□ 0.23
RPP40-204ENST00000468105 SDR42E1Q8WUS8 393 aa16.47■□□□□ 0.23
RPP40-204ENST00000468105 FBXO28Q9NVF7 368 aa16.47■□□□□ 0.23
RPP40-204ENST00000468105 BDP1A6H8Y1 2624 aa16.46■□□□□ 0.23
RPP40-204ENST00000468105 A0A1W2PQ45 241 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms