RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ARID1BQ8NFD5 2236 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-207ENST00000467273 MRC1P22897 1456 aa7.41□□□□□ -1.22
PTCD3-207ENST00000467273 KIAA1324LA8MWY0 1029 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-207ENST00000467273 GSC2O15499 205 aa7.4□□□□□ -1.22
PTCD3-207ENST00000467273 IGLV1-40P01703 118 aa7.4□□□□□ -1.22
PTCD3-207ENST00000467273 SRGNP10124 158 aa7.4□□□□□ -1.22
PTCD3-207ENST00000467273 GPLD1P80108 840 aa7.4□□□□□ -1.22
PTCD3-207ENST00000467273 FKBP4Q02790 459 aaKnown RBP eCLIP7.4□□□□□ -1.22
PTCD3-207ENST00000467273 DGKZQ13574 1117 aa7.4□□□□□ -1.22
PTCD3-207ENST00000467273 MAP1SQ66K74 1059 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-207ENST00000467273 B4GALNT3Q6L9W6 998 aa7.4□□□□□ -1.22
PTCD3-207ENST00000467273 DNAJC10Q8IXB1 793 aa7.4□□□□□ -1.22
PTCD3-207ENST00000467273 RTKN2Q8IZC4 609 aa7.4□□□□□ -1.22
PTCD3-207ENST00000467273 SIX5Q8N196 739 aa7.4□□□□□ -1.22
PTCD3-207ENST00000467273 MASTLQ96GX5 879 aa7.4□□□□□ -1.22
PTCD3-207ENST00000467273 SLX4Q8IY92 1834 aa7.4□□□□□ -1.23
PTCD3-207ENST00000467273 CACNA1SQ13698 1873 aa7.39□□□□□ -1.23
PTCD3-207ENST00000467273 FZD9O00144 591 aa7.39□□□□□ -1.23
PTCD3-207ENST00000467273 STARD3NLO95772 234 aa7.39□□□□□ -1.23
PTCD3-207ENST00000467273 TARSP26639 723 aaKnown RBP7.39□□□□□ -1.23
PTCD3-207ENST00000467273 GRNP28799 593 aaKnown RBP7.39□□□□□ -1.23
PTCD3-207ENST00000467273 EIF5P55010 431 aaKnown RBP7.39□□□□□ -1.23
PTCD3-207ENST00000467273 ST5P78524 1137 aa7.39□□□□□ -1.23
PTCD3-207ENST00000467273 RTN1Q16799 776 aa7.39□□□□□ -1.23
PTCD3-207ENST00000467273 GDF6Q6KF10 455 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-207ENST00000467273 PRR5LQ6MZQ0 368 aa7.39□□□□□ -1.23
PTCD3-207ENST00000467273 TTC9Q92623 222 aa7.39□□□□□ -1.23
PTCD3-207ENST00000467273 CLP1Q92989 425 aaKnown RBP7.39□□□□□ -1.23
PTCD3-207ENST00000467273 STOML1Q9UBI4 398 aa7.39□□□□□ -1.23
PTCD3-207ENST00000467273 BCORQ6W2J9 1755 aa7.38□□□□□ -1.23
PTCD3-207ENST00000467273 UBR2Q8IWV8 1755 aa7.38□□□□□ -1.23
PTCD3-207ENST00000467273 RNF123Q5XPI4 1314 aa7.38□□□□□ -1.23
PTCD3-207ENST00000467273 ZNF541Q9H0D2 1346 aa7.38□□□□□ -1.23
PTCD3-207ENST00000467273 SASH3O75995 380 aa7.38□□□□□ -1.23
PTCD3-207ENST00000467273 ARID4AP29374 1257 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-207ENST00000467273 IDH3AP50213 366 aa7.38□□□□□ -1.23
PTCD3-207ENST00000467273 MFAP1P55081 439 aaKnown RBP7.38□□□□□ -1.23
PTCD3-207ENST00000467273 AKAP4Q5JQC9 854 aa7.38□□□□□ -1.23
PTCD3-207ENST00000467273 CYP4F22Q6NT55 531 aa7.38□□□□□ -1.23
PTCD3-207ENST00000467273 USP50Q70EL3 339 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-207ENST00000467273 TMEM130Q8N3G9 435 aa7.38□□□□□ -1.23
PTCD3-207ENST00000467273 STAG2Q8N3U4 1231 aa7.38□□□□□ -1.23
PTCD3-207ENST00000467273 CNBD1Q8NA66 436 aa7.38□□□□□ -1.23
PTCD3-207ENST00000467273 SLC52A2Q9HAB3 445 aa7.38□□□□□ -1.23
PTCD3-207ENST00000467273 ZBTB1Q9Y2K1 713 aa7.38□□□□□ -1.23
PTCD3-207ENST00000467273 CASP8AP2Q9UKL3 1982 aa7.37□□□□□ -1.23
PTCD3-207ENST00000467273 KLRG2A4D1S0 409 aaPredicted RBP7.37□□□□□ -1.23
PTCD3-207ENST00000467273 LGR5O75473 907 aa7.37□□□□□ -1.23
PTCD3-207ENST00000467273 NPR1P16066 1061 aa7.37□□□□□ -1.23
PTCD3-207ENST00000467273 ATP2B4P23634 1241 aa7.37□□□□□ -1.23
PTCD3-207ENST00000467273 SEC13P55735 322 aa7.37□□□□□ -1.23
PTCD3-207ENST00000467273 SWI5Q1ZZU3 235 aa7.37□□□□□ -1.23
PTCD3-207ENST00000467273 CST9Q5W186 159 aa7.37□□□□□ -1.23
PTCD3-207ENST00000467273 TBC1D9BQ66K14 1250 aa7.37□□□□□ -1.23
PTCD3-207ENST00000467273 SAPCD2Q86UD0 394 aa7.37□□□□□ -1.23
PTCD3-207ENST00000467273 IL22RA1Q8N6P7 574 aa7.37□□□□□ -1.23
PTCD3-207ENST00000467273 JDP2Q8WYK2 163 aa7.37□□□□□ -1.23
PTCD3-207ENST00000467273 IFT43Q96FT9 208 aa7.37□□□□□ -1.23
PTCD3-207ENST00000467273 SETDB2Q96T68 719 aa7.37□□□□□ -1.23
PTCD3-207ENST00000467273 TEX13AQ9BXU3 409 aaPredicted RBP7.37□□□□□ -1.23
PTCD3-207ENST00000467273 SAGE1Q9NXZ1 904 aa7.37□□□□□ -1.23
PTCD3-207ENST00000467273 DMGDHQ9UI17 866 aaKnown RBP7.37□□□□□ -1.23
PTCD3-207ENST00000467273 GNEQ9Y223 722 aaKnown RBP7.37□□□□□ -1.23
PTCD3-207ENST00000467273 NPHP1O15259 732 aa7.36□□□□□ -1.23
PTCD3-207ENST00000467273 ADAMTS4O75173 837 aa7.36□□□□□ -1.23
PTCD3-207ENST00000467273 INPP5BP32019 993 aa7.36□□□□□ -1.23
PTCD3-207ENST00000467273 SCNN1AP37088 669 aa7.36□□□□□ -1.23
PTCD3-207ENST00000467273 GRIK1P39086 918 aa7.36□□□□□ -1.23
PTCD3-207ENST00000467273 IL6STP40189 918 aaPredicted RBP7.36□□□□□ -1.23
PTCD3-207ENST00000467273 IARSP41252 1262 aaKnown RBP7.36□□□□□ -1.23
PTCD3-207ENST00000467273 EIF6P56537 245 aaKnown RBP7.36□□□□□ -1.23
PTCD3-207ENST00000467273 NOGQ13253 232 aa7.36□□□□□ -1.23
PTCD3-207ENST00000467273 PLD4Q96BZ4 506 aa7.36□□□□□ -1.23
PTCD3-207ENST00000467273 PSMD1Q99460 953 aa7.36□□□□□ -1.23
PTCD3-207ENST00000467273 KLK14Q9P0G3 267 aa7.36□□□□□ -1.23
PTCD3-207ENST00000467273 DHX15O43143 795 aaKnown RBP7.35□□□□□ -1.23
PTCD3-207ENST00000467273 PRMT3O60678 531 aa7.35□□□□□ -1.23
PTCD3-207ENST00000467273 AOC2O75106 756 aa7.35□□□□□ -1.23
PTCD3-207ENST00000467273 ALDH1B1P30837 517 aa7.35□□□□□ -1.23
PTCD3-207ENST00000467273 ARSDP51689 593 aa7.35□□□□□ -1.23
PTCD3-207ENST00000467273 CLEC4GQ6UXB4 293 aa7.35□□□□□ -1.23
PTCD3-207ENST00000467273 Q6ZS46 218 aa7.35□□□□□ -1.23
PTCD3-207ENST00000467273 PRIMPOLQ96LW4 560 aa7.35□□□□□ -1.23
PTCD3-207ENST00000467273 ZNF277Q9NRM2 450 aaPredicted RBP7.35□□□□□ -1.23
PTCD3-207ENST00000467273 CDHR2Q9BYE9 1310 aa7.34□□□□□ -1.23
PTCD3-207ENST00000467273 J3QW42 95 aa7.34□□□□□ -1.23
PTCD3-207ENST00000467273 CANXP27824 592 aaKnown RBP7.34□□□□□ -1.23
PTCD3-207ENST00000467273 NRLP54845 237 aa7.34□□□□□ -1.23
PTCD3-207ENST00000467273 GRM1Q13255 1194 aa7.34□□□□□ -1.23
PTCD3-207ENST00000467273 ZDHHC13Q8IUH4 622 aa7.34□□□□□ -1.23
PTCD3-207ENST00000467273 RGS22Q8NE09 1264 aa7.34□□□□□ -1.23
PTCD3-207ENST00000467273 GAS2L2Q8NHY3 880 aa7.34□□□□□ -1.23
PTCD3-207ENST00000467273 CCER1Q8TC90 406 aaPredicted RBP7.34□□□□□ -1.23
PTCD3-207ENST00000467273 MTMR7Q9Y216 660 aa7.34□□□□□ -1.23
PTCD3-207ENST00000467273 SNED1Q8TER0 1413 aa7.34□□□□□ -1.23
PTCD3-207ENST00000467273 RNMTO43148 476 aaKnown RBP7.33□□□□□ -1.24
PTCD3-207ENST00000467273 CAMTA2O94983 1202 aa7.33□□□□□ -1.24
PTCD3-207ENST00000467273 GHRHP01286 108 aa7.33□□□□□ -1.24
PTCD3-207ENST00000467273 SPINK2P20155 84 aa7.33□□□□□ -1.24
PTCD3-207ENST00000467273 NFIAQ12857 509 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms