RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 CNTNAP5Q8WYK1 1306 aa15.14■□□□□ 0.01
COL4A1-202ENST00000467182 WDR33Q9C0J8 1336 aaKnown RBP15.14■□□□□ 0.01
COL4A1-202ENST00000467182 ZSCAN22P10073 491 aaPredicted RBP15.13■□□□□ 0.01
COL4A1-202ENST00000467182 PDCP20941 246 aa15.13■□□□□ 0.01
COL4A1-202ENST00000467182 PPP4R3BQ5MIZ7 849 aa15.13■□□□□ 0.01
COL4A1-202ENST00000467182 PRAMEF18Q5VWM3 479 aa15.13■□□□□ 0.01
COL4A1-202ENST00000467182 CPLX2Q6PUV4 134 aaKnown RBP15.13■□□□□ 0.01
COL4A1-202ENST00000467182 CLEC17AQ6ZS10 378 aa15.13■□□□□ 0.01
COL4A1-202ENST00000467182 CTCFLQ8NI51 663 aaPredicted RBP15.13■□□□□ 0.01
COL4A1-202ENST00000467182 AIFM3Q96NN9 605 aa15.13■□□□□ 0.01
COL4A1-202ENST00000467182 TAF1DQ9H5J8 278 aaPredicted RBP15.13■□□□□ 0.01
COL4A1-202ENST00000467182 ZNF112Q9UJU3 913 aa15.13■□□□□ 0.01
COL4A1-202ENST00000467182 A0A1W2PRG0 241 aa15.12■□□□□ 0.01
COL4A1-202ENST00000467182 USP17L5A8MUK1 530 aa15.12■□□□□ 0.01
COL4A1-202ENST00000467182 PDHBP11177 359 aa15.12■□□□□ 0.01
COL4A1-202ENST00000467182 ICA1Q05084 483 aa15.12■□□□□ 0.01
COL4A1-202ENST00000467182 SSRP1Q08945 709 aaKnown RBP15.12■□□□□ 0.01
COL4A1-202ENST00000467182 PKN1Q16512 942 aa15.12■□□□□ 0.01
COL4A1-202ENST00000467182 DLK2Q6UY11 383 aa15.12■□□□□ 0.01
COL4A1-202ENST00000467182 CDC37L1Q7L3B6 337 aa15.12■□□□□ 0.01
COL4A1-202ENST00000467182 FAM184AQ8NB25 1140 aa15.12■□□□□ 0.01
COL4A1-202ENST00000467182 RGS22Q8NE09 1264 aa15.12■□□□□ 0.01
COL4A1-202ENST00000467182 SLC26A6Q9BXS9 759 aa15.12■□□□□ 0.01
COL4A1-202ENST00000467182 RNF26Q9BY78 433 aaPredicted RBP15.12■□□□□ 0.01
COL4A1-202ENST00000467182 CABP5Q9NP86 173 aa15.12■□□□□ 0.01
COL4A1-202ENST00000467182 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.12■□□□□ 0.01
COL4A1-202ENST00000467182 PHIPQ8WWQ0 1821 aa15.11■□□□□ 0.01
COL4A1-202ENST00000467182 ADM5C9JUS6 153 aa15.11■□□□□ 0.01
COL4A1-202ENST00000467182 PRPF3O43395 683 aaKnown RBP15.11■□□□□ 0.01
COL4A1-202ENST00000467182 F13A1P00488 732 aa15.11■□□□□ 0.01
COL4A1-202ENST00000467182 PDIA4P13667 645 aaKnown RBP15.11■□□□□ 0.01
COL4A1-202ENST00000467182 KIF5BP33176 963 aa15.11■□□□□ 0.01
COL4A1-202ENST00000467182 USP17L2Q6R6M4 530 aa15.11■□□□□ 0.01
COL4A1-202ENST00000467182 ZC3H15Q8WU90 426 aaKnown RBP15.11■□□□□ 0.01
COL4A1-202ENST00000467182 SHISA4Q96DD7 197 aa15.11■□□□□ 0.01
COL4A1-202ENST00000467182 SYNPO2Q9UMS6 1093 aa15.11■□□□□ 0.01
COL4A1-202ENST00000467182 MYH15Q9Y2K3 1946 aa15.11■□□□□ 0.01
COL4A1-202ENST00000467182 OTOFQ9HC10 1997 aa15.11■□□□□ 0.01
COL4A1-202ENST00000467182 IQCA1LA6NCM1 817 aa15.1■□□□□ 0.01
COL4A1-202ENST00000467182 CYTH3O43739 400 aa15.1■□□□□ 0.01
COL4A1-202ENST00000467182 DEXIO95424 95 aa15.1■□□□□ 0.01
COL4A1-202ENST00000467182 GOLGA8HP0CJ92 632 aa15.1■□□□□ 0.01
COL4A1-202ENST00000467182 FOXD4L5Q5VV16 416 aaPredicted RBP15.1■□□□□ 0.01
COL4A1-202ENST00000467182 DCAF15Q66K64 600 aa15.1■□□□□ 0.01
COL4A1-202ENST00000467182 CCDC82Q8N4S0 544 aa15.1■□□□□ 0.01
COL4A1-202ENST00000467182 GMCL1P1Q8NEA9 526 aa15.1■□□□□ 0.01
COL4A1-202ENST00000467182 FOXD4L4Q8WXT5 416 aaPredicted RBP15.1■□□□□ 0.01
COL4A1-202ENST00000467182 DCPSQ96C86 337 aaKnown RBP15.1■□□□□ 0.01
COL4A1-202ENST00000467182 ALG1Q9BT22 464 aa15.1■□□□□ 0.01
COL4A1-202ENST00000467182 ZNF341Q9BYN7 854 aa15.1■□□□□ 0.01
COL4A1-202ENST00000467182 GJB4Q9NTQ9 266 aa15.1■□□□□ 0.01
COL4A1-202ENST00000467182 KIF3AQ9Y496 699 aa15.1■□□□□ 0.01
COL4A1-202ENST00000467182 VPS37CA5D8V6 355 aaPredicted RBP15.09■□□□□ 0.01
COL4A1-202ENST00000467182 PARP1P09874 1014 aaKnown RBP15.09■□□□□ 0.01
COL4A1-202ENST00000467182 SMARCA1P28370 1054 aa15.09■□□□□ 0.01
COL4A1-202ENST00000467182 INPP5BP32019 993 aa15.09■□□□□ 0.01
COL4A1-202ENST00000467182 GNAQP50148 359 aa15.09■□□□□ 0.01
COL4A1-202ENST00000467182 FOSBP53539 338 aa15.09■□□□□ 0.01
COL4A1-202ENST00000467182 ATP2B2Q01814 1243 aa15.09■□□□□ 0.01
COL4A1-202ENST00000467182 RESTQ13127 1097 aa15.09■□□□□ 0.01
COL4A1-202ENST00000467182 OTUD7BQ6GQQ9 843 aa15.09■□□□□ 0.01
COL4A1-202ENST00000467182 FBXO18Q8NFZ0 1043 aa15.09■□□□□ 0.01
COL4A1-202ENST00000467182 ACER1Q8TDN7 264 aa15.09■□□□□ 0.01
COL4A1-202ENST00000467182 HOOK2Q96ED9 719 aa15.09■□□□□ 0.01
COL4A1-202ENST00000467182 CHAMP1Q96JM3 812 aa15.09■□□□□ 0.01
COL4A1-202ENST00000467182 LZTS2Q9BRK4 669 aa15.09■□□□□ 0.01
COL4A1-202ENST00000467182 SPZ1Q9BXG8 430 aa15.09■□□□□ 0.01
COL4A1-202ENST00000467182 GINM1Q9NU53 330 aa15.09■□□□□ 0.01
COL4A1-202ENST00000467182 FZD1Q9UP38 647 aa15.09■□□□□ 0.01
COL4A1-202ENST00000467182 MTMR7Q9Y216 660 aa15.09■□□□□ 0.01
COL4A1-202ENST00000467182 TMX2Q9Y320 296 aa15.09■□□□□ 0.01
COL4A1-202ENST00000467182 KLRF2D3W0D1 207 aa15.08■□□□□ 0
COL4A1-202ENST00000467182 CTNND1O60716 968 aaKnown RBP15.08■□□□□ 0
COL4A1-202ENST00000467182 BAG4O95429 457 aaKnown RBP15.08■□□□□ 0
COL4A1-202ENST00000467182 ECE1P42892 770 aa15.08■□□□□ 0
COL4A1-202ENST00000467182 GUCY1B3Q02153 619 aa15.08■□□□□ 0
COL4A1-202ENST00000467182 ZNF543Q08ER8 600 aa15.08■□□□□ 0
COL4A1-202ENST00000467182 NFKBIBQ15653 356 aa15.08■□□□□ 0
COL4A1-202ENST00000467182 ASPRV1Q53RT3 343 aa15.08■□□□□ 0
COL4A1-202ENST00000467182 KIAA1755Q5JYT7 1200 aa15.08■□□□□ 0
COL4A1-202ENST00000467182 CCDC84Q86UT8 332 aaPredicted RBP15.08■□□□□ 0
COL4A1-202ENST00000467182 TRIM22Q8IYM9 498 aa15.08■□□□□ 0
COL4A1-202ENST00000467182 DCAF4Q8WV16 495 aa15.08■□□□□ 0
COL4A1-202ENST00000467182 WASF1Q92558 559 aa15.08■□□□□ 0
COL4A1-202ENST00000467182 KLRG1Q96E93 195 aa15.08■□□□□ 0
COL4A1-202ENST00000467182 C8orf76Q96K31 380 aa15.08■□□□□ 0
COL4A1-202ENST00000467182 GLIS2Q9BZE0 524 aaPredicted RBP15.08■□□□□ 0
COL4A1-202ENST00000467182 CPVLQ9H3G5 476 aa15.08■□□□□ 0
COL4A1-202ENST00000467182 V9GY48 417 aaPredicted RBP15.08■□□□□ 0
COL4A1-202ENST00000467182 FRMPD2Q68DX3 1309 aaPredicted RBP15.08■□□□□ 0
COL4A1-202ENST00000467182 hCG_1642624A0A1W2PR95 340 aa15.07■□□□□ 0
COL4A1-202ENST00000467182 F5H6K3 240 aa15.07■□□□□ 0
COL4A1-202ENST00000467182 USP2O75604 605 aaPredicted RBP15.07■□□□□ 0
COL4A1-202ENST00000467182 ASNSP08243 561 aa15.07■□□□□ 0
COL4A1-202ENST00000467182 POTEIP0CG38 1075 aa15.07■□□□□ 0
COL4A1-202ENST00000467182 POTEJP0CG39 1038 aa15.07■□□□□ 0
COL4A1-202ENST00000467182 VEGFAP15692 232 aaPredicted RBP15.07■□□□□ 0
COL4A1-202ENST00000467182 KLRC3Q07444 240 aa15.07■□□□□ 0
COL4A1-202ENST00000467182 SUPT20HL1Q3ZLR7 823 aa15.07■□□□□ 0
COL4A1-202ENST00000467182 SLFN13Q68D06 897 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms