RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 PHKBQ93100 1093 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 FBXW7Q969H0 707 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 MXD3Q9BW11 206 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 IDI2Q9BXS1 227 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 SLC26A6Q9BXS9 759 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 IL17RBQ9NRM6 502 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 USP40Q9NVE5 1235 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 RTEL1Q9NZ71 1219 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 SWAP70Q9UH65 585 aa11.06□□□□□ -0.64
APOBEC1-202ENST00000467171 PPIP5K2O43314 1243 aa11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 HRO43593 1189 aa11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 PPFIA3O75145 1194 aa11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 TSPY3P0CV98 308 aa11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 TSPY8P0CW00 308 aa11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 KIF5BP33176 963 aa11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 GNAQP50148 359 aa11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 CCDC183Q5T5S1 534 aa11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 MYSM1Q5VVJ2 828 aa11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 CTCFLQ8NI51 663 aaPredicted RBP11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 DDX27Q96GQ7 796 aaKnown RBP11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 USP28Q96RU2 1077 aa11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 OSBPL5Q9H0X9 879 aaPredicted RBP11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 EHD4Q9H223 541 aa11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 POLR3EQ9NVU0 708 aa11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 RBM27Q9P2N5 1060 aaKnown RBP11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 TFIP11Q9UBB9 837 aaKnown RBP11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 SAP30BPQ9UHR5 308 aaKnown RBP11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 MYH13Q9UKX3 1938 aa11.05□□□□□ -0.64
APOBEC1-202ENST00000467171 PLIN4Q96Q06 1357 aa11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 F8W031 263 aaPredicted RBP11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 NMT2O60551 498 aa11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 YEATS4O95619 227 aa11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 NASPP49321 788 aaPredicted RBP11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 GUCY1B3Q02153 619 aa11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 OTUD7BQ6GQQ9 843 aa11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 GAS2L3Q86XJ1 694 aa11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 FAM177A1Q8N128 213 aaPredicted RBP11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 ZNF454Q8N9F8 522 aa11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 SLC44A5Q8NCS7 719 aa11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 KCNK17Q96T54 332 aa11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 DHX36Q9H2U1 1008 aaKnown RBP11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 KAT14Q9H8E8 782 aa11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 DDX4Q9NQI0 724 aaKnown RBP11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 KCNQ5Q9NR82 932 aa11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 PIM2Q9P1W9 311 aa11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 HCSTQ9UBK5 93 aa11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 SLX4Q8IY92 1834 aa11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 CCDC88AQ3V6T2 1871 aa11.04□□□□□ -0.64
APOBEC1-202ENST00000467171 YDJCA8MPS7 323 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 KIF28PB7ZC32 967 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 MMP1P03956 469 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 HLA-DOAP06340 250 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 VIL1P09327 827 aaKnown RBP11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 XBP1P17861 261 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 GUCY1A2P33402 732 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 MMP14P50281 582 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 SCNN1DP51172 638 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 FOSBP53539 338 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 AKAP17AQ02040 695 aaKnown RBP11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 GRM4Q14833 912 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 SAFBQ15424 915 aaKnown RBP eCLIP11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 PKN1Q16512 942 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 RSBN1LQ6PCB5 846 aaPredicted RBP11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 LRSAM1Q6UWE0 723 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 KIAA0825Q8IV33 1275 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 PNMA1Q8ND90 353 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 KCNG4Q8TDN1 519 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 PGBD1Q96JS3 809 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 AIFM3Q96NN9 605 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 LZTS2Q9BRK4 669 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 FOXP1Q9H334 677 aaPredicted RBP11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 SERPINB13Q9UIV8 391 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 CD2APQ9Y5K6 639 aa11.03□□□□□ -0.64
APOBEC1-202ENST00000467171 IGKV6D-41A0A0C4DH26 115 aa11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 GOLGA6L4A6NEF3 574 aa11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 ZBTB7AO95365 584 aa11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 PLEKHA8P1O95397 391 aa11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 TOP1P11387 765 aaKnown RBP11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 SMARCA1P28370 1054 aa11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 MFSD10Q14728 455 aa11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 DALRD3Q5D0E6 543 aaKnown RBP11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 LARGE2Q8N3Y3 721 aa11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 SRBD1Q8N5C6 995 aaKnown RBP11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 LINC00301Q8NCQ3 95 aa11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 CCDC17Q96LX7 622 aa11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 GMLQ99445 158 aa11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 GRPEL1Q9HAV7 217 aa11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 GJB4Q9NTQ9 266 aa11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 DDX19AQ9NUU7 478 aaKnown RBP11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 MORC2Q9Y6X9 1032 aaPredicted RBP11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 CNTNAP5Q8WYK1 1306 aa11.02□□□□□ -0.65
APOBEC1-202ENST00000467171 A0A1W2PQ27 194 aa11.01□□□□□ -0.65
APOBEC1-202ENST00000467171 A0A1W2PQ64 194 aa11.01□□□□□ -0.65
APOBEC1-202ENST00000467171 A0A1W2PQD8 194 aa11.01□□□□□ -0.65
APOBEC1-202ENST00000467171 ENTPD3O75355 529 aa11.01□□□□□ -0.65
APOBEC1-202ENST00000467171 XRCC6P12956 609 aaKnown RBP eCLIP11.01□□□□□ -0.65
APOBEC1-202ENST00000467171 PICALMQ13492 652 aa11.01□□□□□ -0.65
APOBEC1-202ENST00000467171 SLC4A8Q2Y0W8 1093 aa11.01□□□□□ -0.65
APOBEC1-202ENST00000467171 ANO1Q5XXA6 986 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms