RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 ADAMTS5Q9UNA0 930 aa6.98□□□□□ -1.29
CXXC4-202ENST00000466963 SIPA1L1O43166 1804 aa6.97□□□□□ -1.29
CXXC4-202ENST00000466963 DDTLA6NHG4 134 aaPredicted RBP6.97□□□□□ -1.29
CXXC4-202ENST00000466963 E9PSI1 815 aa6.97□□□□□ -1.29
CXXC4-202ENST00000466963 UBTFL1P0CB47 393 aaPredicted RBP6.97□□□□□ -1.29
CXXC4-202ENST00000466963 CDK7P50613 346 aa6.97□□□□□ -1.29
CXXC4-202ENST00000466963 MDM2Q00987 491 aaPredicted RBP6.97□□□□□ -1.29
CXXC4-202ENST00000466963 TCP10Q12799 353 aa6.97□□□□□ -1.29
CXXC4-202ENST00000466963 POLA2Q14181 598 aa6.97□□□□□ -1.29
CXXC4-202ENST00000466963 TTF1Q15361 905 aaPredicted RBP6.97□□□□□ -1.29
CXXC4-202ENST00000466963 TICAM2Q86XR7 235 aa6.97□□□□□ -1.29
CXXC4-202ENST00000466963 ZNF594Q96JF6 807 aaPredicted RBP6.97□□□□□ -1.29
CXXC4-202ENST00000466963 TMEM39AQ9NV64 488 aa6.97□□□□□ -1.29
CXXC4-202ENST00000466963 CCND3P30281 292 aaPredicted RBP6.97□□□□□ -1.29
CXXC4-202ENST00000466963 TMEM179Q6ZVK1 233 aa6.97□□□□□ -1.29
CXXC4-202ENST00000466963 AMOTL1Q8IY63 956 aa6.97□□□□□ -1.29
CXXC4-202ENST00000466963 JARID2Q92833 1246 aaPredicted RBP6.97□□□□□ -1.29
CXXC4-202ENST00000466963 BADQ92934 168 aa6.97□□□□□ -1.29
CXXC4-202ENST00000466963 MPHOSPH6Q99547 160 aaKnown RBP6.97□□□□□ -1.29
CXXC4-202ENST00000466963 CNPY2Q9Y2B0 182 aa6.97□□□□□ -1.29
CXXC4-202ENST00000466963 ATP11BQ9Y2G3 1177 aa6.97□□□□□ -1.29
CXXC4-202ENST00000466963 B4DLN1 442 aa6.96□□□□□ -1.29
CXXC4-202ENST00000466963 KIF28PB7ZC32 967 aa6.96□□□□□ -1.29
CXXC4-202ENST00000466963 CNMDO75829 334 aa6.96□□□□□ -1.29
CXXC4-202ENST00000466963 SYN1P17600 705 aa6.96□□□□□ -1.29
CXXC4-202ENST00000466963 PRDX5P30044 214 aa6.96□□□□□ -1.29
CXXC4-202ENST00000466963 MRPL12P52815 198 aaKnown RBP6.96□□□□□ -1.29
CXXC4-202ENST00000466963 GJA9P57773 515 aa6.96□□□□□ -1.29
CXXC4-202ENST00000466963 MECOMQ03112 1051 aa6.96□□□□□ -1.29
CXXC4-202ENST00000466963 MTMR2Q13614 643 aa6.96□□□□□ -1.29
CXXC4-202ENST00000466963 RCSD1Q6JBY9 416 aa6.96□□□□□ -1.29
CXXC4-202ENST00000466963 SPATA5Q8NB90 893 aa6.96□□□□□ -1.29
CXXC4-202ENST00000466963 GLT1D1Q96MS3 346 aa6.96□□□□□ -1.29
CXXC4-202ENST00000466963 PUS3Q9BZE2 481 aaKnown RBP6.96□□□□□ -1.29
CXXC4-202ENST00000466963 ELL2O00472 640 aaPredicted RBP6.96□□□□□ -1.3
CXXC4-202ENST00000466963 CCDC158Q5M9N0 1113 aa6.96□□□□□ -1.3
CXXC4-202ENST00000466963 NAA16Q6N069 864 aaPredicted RBP6.96□□□□□ -1.3
CXXC4-202ENST00000466963 MRPL50Q8N5N7 158 aaKnown RBP6.96□□□□□ -1.3
CXXC4-202ENST00000466963 SPATC1LQ9H0A9 340 aa6.96□□□□□ -1.3
CXXC4-202ENST00000466963 XPNPEP3Q9NQH7 507 aa6.96□□□□□ -1.3
CXXC4-202ENST00000466963 CDK5RAP2Q96SN8 1893 aa6.96□□□□□ -1.3
CXXC4-202ENST00000466963 NKRFO15226 690 aaKnown RBP eCLIP6.96□□□□□ -1.3
CXXC4-202ENST00000466963 CACNB3P54284 484 aa6.96□□□□□ -1.3
CXXC4-202ENST00000466963 GRIK5Q16478 980 aa6.96□□□□□ -1.3
CXXC4-202ENST00000466963 LRRC24Q50LG9 513 aa6.96□□□□□ -1.3
CXXC4-202ENST00000466963 BMP8AQ7Z5Y6 402 aa6.96□□□□□ -1.3
CXXC4-202ENST00000466963 CHST13Q8NET6 341 aa6.96□□□□□ -1.3
CXXC4-202ENST00000466963 FEZ1Q99689 392 aa6.96□□□□□ -1.3
CXXC4-202ENST00000466963 EMILIN3Q9NT22 766 aa6.96□□□□□ -1.3
CXXC4-202ENST00000466963 POLR3EQ9NVU0 708 aa6.96□□□□□ -1.3
CXXC4-202ENST00000466963 SERPINB13Q9UIV8 391 aa6.96□□□□□ -1.3
CXXC4-202ENST00000466963 ARVCFO00192 962 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 PLA2G6O60733 806 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 FGBP02675 491 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 BMP1P13497 986 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 TRIM60Q495X7 471 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 MAML3Q96JK9 1138 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 POP1Q99575 1024 aaKnown RBP6.95□□□□□ -1.3
CXXC4-202ENST00000466963 USP44Q9H0E7 712 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 ZNF287Q9HBT7 754 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 TRIOBPQ9H2D6 2365 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 LRRC37A2A6NM11 1700 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 GOLGB1Q14789 3259 aaKnown RBP6.95□□□□□ -1.3
CXXC4-202ENST00000466963 IPO8O15397 1037 aaKnown RBP6.95□□□□□ -1.3
CXXC4-202ENST00000466963 MYCP01106 439 aaPredicted RBP6.95□□□□□ -1.3
CXXC4-202ENST00000466963 TLE2Q04725 743 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 EXOSC9Q06265 439 aaKnown RBP6.95□□□□□ -1.3
CXXC4-202ENST00000466963 KCTD2Q14681 263 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 ERC1Q8IUD2 1116 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 RPAP2Q8IXW5 612 aaPredicted RBP6.95□□□□□ -1.3
CXXC4-202ENST00000466963 MFSD14AQ96MC6 490 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 TINF2Q9BSI4 451 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 LMAN2LQ9H0V9 348 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 ABHD16BQ9H3Z7 469 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 GOPCQ9HD26 462 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 STARD7Q9NQZ5 370 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 MYH1P12882 1939 aa6.95□□□□□ -1.3
CXXC4-202ENST00000466963 A0A1W2PQ45 241 aaPredicted RBP6.94□□□□□ -1.3
CXXC4-202ENST00000466963 A0A1W2PQY0 241 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 ASB14A6NK59 587 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 SPDYE16A6NNV3 312 aaPredicted RBP6.94□□□□□ -1.3
CXXC4-202ENST00000466963 RPLP2P05387 115 aaKnown RBP6.94□□□□□ -1.3
CXXC4-202ENST00000466963 RASGRF1Q13972 1273 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 DIXDC1Q155Q3 683 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 ABCB5Q2M3G0 1257 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 NBPF20Q3BBV1 942 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 ZNF792Q3KQV3 632 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 HSP90AB4PQ58FF6 505 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 TMEM240Q5SV17 173 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 SLC28A3Q9HAS3 691 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 FLT1P17948 1338 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 ST18O60284 1047 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 ADORA2AP29274 412 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 RBL2Q08999 1139 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 LEXMQ3ZCV2 418 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 BRDTQ58F21 947 aaPredicted RBP6.94□□□□□ -1.3
CXXC4-202ENST00000466963 GORABQ5T7V8 394 aa6.94□□□□□ -1.3
CXXC4-202ENST00000466963 CHMP4BQ9H444 224 aaKnown RBP6.94□□□□□ -1.3
CXXC4-202ENST00000466963 DDX4Q9NQI0 724 aaKnown RBP6.94□□□□□ -1.3
CXXC4-202ENST00000466963 PARP14Q460N5 1801 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms