RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 SWAP70Q9UH65 585 aa23.52■■□□□ 1.36
CCDC78-207ENST00000466708 SRPRBQ9Y5M8 271 aaKnown RBP23.52■■□□□ 1.36
CCDC78-207ENST00000466708 MYO3BQ8WXR4 1341 aa23.52■■□□□ 1.36
CCDC78-207ENST00000466708 TOP1P11387 765 aaKnown RBP23.52■■□□□ 1.36
CCDC78-207ENST00000466708 MSNP26038 577 aaKnown RBP23.52■■□□□ 1.36
CCDC78-207ENST00000466708 CHRNA5P30532 468 aa23.52■■□□□ 1.36
CCDC78-207ENST00000466708 NLRP5P59047 1200 aa23.52■■□□□ 1.36
CCDC78-207ENST00000466708 PICALMQ13492 652 aa23.52■■□□□ 1.36
CCDC78-207ENST00000466708 ZRSR1Q15695 479 aaKnown RBP23.52■■□□□ 1.36
CCDC78-207ENST00000466708 STAG2Q8N3U4 1231 aa23.52■■□□□ 1.36
CCDC78-207ENST00000466708 SUPT20HQ8NEM7 779 aa23.52■■□□□ 1.36
CCDC78-207ENST00000466708 CLIC6Q96NY7 704 aa23.52■■□□□ 1.36
CCDC78-207ENST00000466708 MXD3Q9BW11 206 aa23.52■■□□□ 1.36
CCDC78-207ENST00000466708 FBXO2Q9UK22 296 aaPredicted RBP23.52■■□□□ 1.36
CCDC78-207ENST00000466708 SCNN1DP51172 638 aa23.51■■□□□ 1.35
CCDC78-207ENST00000466708 PLCB2Q00722 1185 aa23.51■■□□□ 1.35
CCDC78-207ENST00000466708 APOBEC3HQ6NTF7 200 aaKnown RBP23.51■■□□□ 1.35
CCDC78-207ENST00000466708 ELOA2Q8IYF1 753 aaPredicted RBP23.51■■□□□ 1.35
CCDC78-207ENST00000466708 ZDHHC15Q96MV8 337 aa23.51■■□□□ 1.35
CCDC78-207ENST00000466708 NAT10Q9H0A0 1025 aaKnown RBP23.51■■□□□ 1.35
CCDC78-207ENST00000466708 FAM13BQ9NYF5 915 aa23.51■■□□□ 1.35
CCDC78-207ENST00000466708 ECE2O60344 883 aa23.5■■□□□ 1.35
CCDC78-207ENST00000466708 CRKP46108 304 aa23.5■■□□□ 1.35
CCDC78-207ENST00000466708 TRAPPC10P48553 1259 aa23.5■■□□□ 1.35
CCDC78-207ENST00000466708 GRIPAP1Q4V328 841 aa23.5■■□□□ 1.35
CCDC78-207ENST00000466708 CDC42EP5Q6NZY7 148 aa23.5■■□□□ 1.35
CCDC78-207ENST00000466708 CEP57L1Q8IYX8 460 aa23.5■■□□□ 1.35
CCDC78-207ENST00000466708 DDX4Q9NQI0 724 aaKnown RBP23.5■■□□□ 1.35
CCDC78-207ENST00000466708 SMARCA1P28370 1054 aa23.49■■□□□ 1.35
CCDC78-207ENST00000466708 IQCB1Q15051 598 aa23.49■■□□□ 1.35
CCDC78-207ENST00000466708 OSBPL5Q9H0X9 879 aaPredicted RBP23.49■■□□□ 1.35
CCDC78-207ENST00000466708 KCNH3Q9ULD8 1083 aa23.49■■□□□ 1.35
CCDC78-207ENST00000466708 DACT2Q5SW24 774 aa23.49■■□□□ 1.35
CCDC78-207ENST00000466708 CEP95Q96GE4 821 aa23.49■■□□□ 1.35
CCDC78-207ENST00000466708 SPZ1Q9BXG8 430 aa23.49■■□□□ 1.35
CCDC78-207ENST00000466708 SERPINB13Q9UIV8 391 aa23.49■■□□□ 1.35
CCDC78-207ENST00000466708 ZKSCAN5Q9Y2L8 839 aa23.49■■□□□ 1.35
CCDC78-207ENST00000466708 BAZ2BQ9UIF8 2168 aaKnown RBP23.49■■□□□ 1.35
CCDC78-207ENST00000466708 GOLGA6L19H0YKK7 550 aa23.48■■□□□ 1.35
CCDC78-207ENST00000466708 AP5Z1O43299 807 aa23.48■■□□□ 1.35
CCDC78-207ENST00000466708 HLA-DOAP06340 250 aa23.48■■□□□ 1.35
CCDC78-207ENST00000466708 BAG6P46379 1132 aa23.48■■□□□ 1.35
CCDC78-207ENST00000466708 SF3B2Q13435 895 aaKnown RBP23.48■■□□□ 1.35
CCDC78-207ENST00000466708 GALNT17Q6IS24 598 aa23.48■■□□□ 1.35
CCDC78-207ENST00000466708 C11orf57Q6ZUT1 292 aaPredicted RBP23.48■■□□□ 1.35
CCDC78-207ENST00000466708 PARP1P09874 1014 aaKnown RBP23.47■■□□□ 1.35
CCDC78-207ENST00000466708 KIAA2012Q0VF49 1180 aa23.47■■□□□ 1.35
CCDC78-207ENST00000466708 EARS2Q5JPH6 523 aaKnown RBP23.47■■□□□ 1.35
CCDC78-207ENST00000466708 CCDC148Q8NFR7 591 aa23.47■■□□□ 1.35
CCDC78-207ENST00000466708 KLRF2D3W0D1 207 aa23.47■■□□□ 1.35
CCDC78-207ENST00000466708 ATP2B1P20020 1258 aa23.47■■□□□ 1.35
CCDC78-207ENST00000466708 KCNQ5Q9NR82 932 aa23.47■■□□□ 1.35
CCDC78-207ENST00000466708 HOOK1Q9UJC3 728 aaKnown RBP23.47■■□□□ 1.35
CCDC78-207ENST00000466708 MYH8P13535 1937 aa23.47■■□□□ 1.35
CCDC78-207ENST00000466708 FAM205CA6NFA0 338 aa23.46■■□□□ 1.35
CCDC78-207ENST00000466708 KRBA2Q6ZNG9 492 aa23.46■■□□□ 1.35
CCDC78-207ENST00000466708 BLIDQ8IZY5 108 aa23.46■■□□□ 1.35
CCDC78-207ENST00000466708 PIBF1Q8WXW3 757 aa23.46■■□□□ 1.35
CCDC78-207ENST00000466708 FERMT2Q96AC1 680 aa23.46■■□□□ 1.35
CCDC78-207ENST00000466708 BPIFA3Q9BQP9 254 aa23.46■■□□□ 1.35
CCDC78-207ENST00000466708 EHD4Q9H223 541 aa23.46■■□□□ 1.35
CCDC78-207ENST00000466708 MTMR4Q9NYA4 1195 aa23.46■■□□□ 1.35
CCDC78-207ENST00000466708 ZNF219Q9P2Y4 722 aaPredicted RBP23.46■■□□□ 1.35
CCDC78-207ENST00000466708 TUBE1Q9UJT0 475 aa23.46■■□□□ 1.35
CCDC78-207ENST00000466708 PCDHA4Q9UN74 947 aa23.46■■□□□ 1.35
CCDC78-207ENST00000466708 C10orf71Q711Q0 1435 aa23.46■■□□□ 1.35
CCDC78-207ENST00000466708 BECN2A8MW95 431 aa23.45■■□□□ 1.34
CCDC78-207ENST00000466708 CYTH3O43739 400 aa23.45■■□□□ 1.34
CCDC78-207ENST00000466708 NLRP12P59046 1061 aa23.45■■□□□ 1.34
CCDC78-207ENST00000466708 TTC38Q5R3I4 469 aa23.45■■□□□ 1.34
CCDC78-207ENST00000466708 SERPINA10Q9UK55 444 aa23.45■■□□□ 1.34
CCDC78-207ENST00000466708 ZNF646O15015 1829 aaPredicted RBP23.45■■□□□ 1.34
CCDC78-207ENST00000466708 SCN9AQ15858 1988 aa23.45■■□□□ 1.34
CCDC78-207ENST00000466708 IGKV6D-41A0A0C4DH26 115 aa23.45■■□□□ 1.34
CCDC78-207ENST00000466708 NPM3O75607 178 aaKnown RBP23.45■■□□□ 1.34
CCDC78-207ENST00000466708 VEGFAP15692 232 aaPredicted RBP23.45■■□□□ 1.34
CCDC78-207ENST00000466708 PPP4R3BQ5MIZ7 849 aa23.45■■□□□ 1.34
CCDC78-207ENST00000466708 KIAA0825Q8IV33 1275 aa23.45■■□□□ 1.34
CCDC78-207ENST00000466708 DAGLBQ8NCG7 672 aa23.45■■□□□ 1.34
CCDC78-207ENST00000466708 CNNM3Q8NE01 707 aa23.45■■□□□ 1.34
CCDC78-207ENST00000466708 ERCC4Q92889 916 aaPredicted RBP23.45■■□□□ 1.34
CCDC78-207ENST00000466708 DHX36Q9H2U1 1008 aaKnown RBP23.45■■□□□ 1.34
CCDC78-207ENST00000466708 BARHL2Q9NY43 387 aa23.45■■□□□ 1.34
CCDC78-207ENST00000466708 ADAMTSL1Q8N6G6 1762 aa23.45■■□□□ 1.34
CCDC78-207ENST00000466708 GOLGA6L6A8MZA4 724 aa23.44■■□□□ 1.34
CCDC78-207ENST00000466708 TPM3P06753 285 aa23.44■■□□□ 1.34
CCDC78-207ENST00000466708 AOC3Q16853 763 aa23.44■■□□□ 1.34
CCDC78-207ENST00000466708 SLC35G1Q2M3R5 365 aa23.44■■□□□ 1.34
CCDC78-207ENST00000466708 IDI2Q9BXS1 227 aa23.44■■□□□ 1.34
CCDC78-207ENST00000466708 LONRF3Q496Y0 759 aa23.43■■□□□ 1.34
CCDC78-207ENST00000466708 SARM1Q6SZW1 724 aa23.43■■□□□ 1.34
CCDC78-207ENST00000466708 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.43■■□□□ 1.34
CCDC78-207ENST00000466708 SLC16A10Q8TF71 515 aa23.43■■□□□ 1.34
CCDC78-207ENST00000466708 CCDC12Q8WUD4 166 aaPredicted RBP23.43■■□□□ 1.34
CCDC78-207ENST00000466708 GPKOWQ92917 476 aaPredicted RBP eCLIP23.43■■□□□ 1.34
CCDC78-207ENST00000466708 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.43■■□□□ 1.34
CCDC78-207ENST00000466708 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.43■■□□□ 1.34
CCDC78-207ENST00000466708 GRIN1Q05586 938 aa23.43■■□□□ 1.34
CCDC78-207ENST00000466708 KANK3Q6NY19 840 aa23.43■■□□□ 1.34
CCDC78-207ENST00000466708 PIK3AP1Q6ZUJ8 805 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms