RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 RRAGCQ9HB90 399 aa17.66■□□□□ 0.42
SNED1-208ENST00000466618 RBM8AQ9Y5S9 174 aaKnown RBP17.66■□□□□ 0.42
SNED1-208ENST00000466618 U3KPZ7 1027 aaPredicted RBP17.66■□□□□ 0.42
SNED1-208ENST00000466618 PDCP20941 246 aa17.65■□□□□ 0.42
SNED1-208ENST00000466618 TPM4P67936 248 aa17.65■□□□□ 0.42
SNED1-208ENST00000466618 PICALMQ13492 652 aa17.65■□□□□ 0.42
SNED1-208ENST00000466618 SBK1Q52WX2 424 aa17.65■□□□□ 0.42
SNED1-208ENST00000466618 ANGEL2Q5VTE6 544 aaKnown RBP17.65■□□□□ 0.42
SNED1-208ENST00000466618 CTR9Q6PD62 1173 aa17.65■□□□□ 0.42
SNED1-208ENST00000466618 KRBA2Q6ZNG9 492 aa17.65■□□□□ 0.42
SNED1-208ENST00000466618 FAM83AQ86UY5 434 aa17.65■□□□□ 0.42
SNED1-208ENST00000466618 PNMA8AQ86V59 439 aaPredicted RBP17.65■□□□□ 0.42
SNED1-208ENST00000466618 ZC3H15Q8WU90 426 aaKnown RBP17.65■□□□□ 0.42
SNED1-208ENST00000466618 TMOD2Q9NZR1 351 aa17.65■□□□□ 0.42
SNED1-208ENST00000466618 NBPF11Q86T75 865 aa17.64■□□□□ 0.42
SNED1-208ENST00000466618 NAPBQ9H115 298 aa17.64■□□□□ 0.42
SNED1-208ENST00000466618 VEZTQ9HBM0 779 aa17.64■□□□□ 0.42
SNED1-208ENST00000466618 ORC3Q9UBD5 711 aaPredicted RBP17.64■□□□□ 0.42
SNED1-208ENST00000466618 RSPH14Q9UHP6 348 aa17.64■□□□□ 0.42
SNED1-208ENST00000466618 PITPNM2Q9BZ72 1349 aa17.64■□□□□ 0.42
SNED1-208ENST00000466618 TCP10L2B9ZVM9 353 aa17.64■□□□□ 0.41
SNED1-208ENST00000466618 USP17L12C9JPN9 530 aa17.64■□□□□ 0.41
SNED1-208ENST00000466618 USP17L21D6R901 530 aa17.64■□□□□ 0.41
SNED1-208ENST00000466618 NOP2P46087 812 aaKnown RBP17.64■□□□□ 0.41
SNED1-208ENST00000466618 TDO2P48775 406 aa17.64■□□□□ 0.41
SNED1-208ENST00000466618 STX1AQ16623 288 aa17.64■□□□□ 0.41
SNED1-208ENST00000466618 SH3BP5LQ7L8J4 393 aa17.64■□□□□ 0.41
SNED1-208ENST00000466618 FAM151AQ8WW52 585 aa17.64■□□□□ 0.41
SNED1-208ENST00000466618 RASSF4Q9H2L5 321 aa17.64■□□□□ 0.41
SNED1-208ENST00000466618 NMRK2Q9NPI5 230 aa17.64■□□□□ 0.41
SNED1-208ENST00000466618 MCM9Q9NXL9 1143 aa17.64■□□□□ 0.41
SNED1-208ENST00000466618 GGA3Q9NZ52 723 aa17.64■□□□□ 0.41
SNED1-208ENST00000466618 COL2A1P02458 1487 aaPredicted RBP17.63■□□□□ 0.41
SNED1-208ENST00000466618 ATRNL1Q5VV63 1379 aa17.63■□□□□ 0.41
SNED1-208ENST00000466618 TCP10Q12799 353 aa17.63■□□□□ 0.41
SNED1-208ENST00000466618 TMCO3Q6UWJ1 677 aa17.63■□□□□ 0.41
SNED1-208ENST00000466618 ARPP21Q9UBL0 812 aaPredicted RBP17.63■□□□□ 0.41
SNED1-208ENST00000466618 GSDMDP57764 484 aa17.63■□□□□ 0.41
SNED1-208ENST00000466618 C12orf60Q5U649 245 aa17.63■□□□□ 0.41
SNED1-208ENST00000466618 PAXIP1Q6ZW49 1069 aaPredicted RBP17.63■□□□□ 0.41
SNED1-208ENST00000466618 LCMT1Q9UIC8 334 aa17.63■□□□□ 0.41
SNED1-208ENST00000466618 DDX60LQ5H9U9 1706 aaKnown RBP17.63■□□□□ 0.41
SNED1-208ENST00000466618 SEC31AO94979 1220 aaKnown RBP17.62■□□□□ 0.41
SNED1-208ENST00000466618 CYP21A2P08686 494 aa17.62■□□□□ 0.41
SNED1-208ENST00000466618 EVX2Q03828 476 aa17.62■□□□□ 0.41
SNED1-208ENST00000466618 TNFAIP1Q13829 316 aa17.62■□□□□ 0.41
SNED1-208ENST00000466618 APOBEC3FQ8IUX4 373 aaKnown RBP17.62■□□□□ 0.41
SNED1-208ENST00000466618 SAP30BPQ9UHR5 308 aaKnown RBP17.62■□□□□ 0.41
SNED1-208ENST00000466618 ANAPC4Q9UJX5 808 aa17.62■□□□□ 0.41
SNED1-208ENST00000466618 A0A087WWV3 80 aa17.62■□□□□ 0.41
SNED1-208ENST00000466618 CYP2D7A0A087X1C5 515 aa17.62■□□□□ 0.41
SNED1-208ENST00000466618 DDTLA6NHG4 134 aaPredicted RBP17.62■□□□□ 0.41
SNED1-208ENST00000466618 SMIM22K7EJ46 135 aa17.62■□□□□ 0.41
SNED1-208ENST00000466618 MYO1CO00159 1063 aa17.62■□□□□ 0.41
SNED1-208ENST00000466618 TRIM66O15016 1216 aa17.62■□□□□ 0.41
SNED1-208ENST00000466618 SASH3O75995 380 aa17.62■□□□□ 0.41
SNED1-208ENST00000466618 CYP2D6P10635 497 aa17.62■□□□□ 0.41
SNED1-208ENST00000466618 RASA3Q14644 834 aa17.62■□□□□ 0.41
SNED1-208ENST00000466618 CREB3L3Q68CJ9 461 aa17.62■□□□□ 0.41
SNED1-208ENST00000466618 ZNF526Q8TF50 670 aaPredicted RBP17.62■□□□□ 0.41
SNED1-208ENST00000466618 NBPF3Q9H094 633 aa17.62■□□□□ 0.41
SNED1-208ENST00000466618 DHX36Q9H2U1 1008 aaKnown RBP17.62■□□□□ 0.41
SNED1-208ENST00000466618 ARGLU1Q9NWB6 273 aaPredicted RBP17.62■□□□□ 0.41
SNED1-208ENST00000466618 SCAF8Q9UPN6 1271 aaKnown RBP17.62■□□□□ 0.41
SNED1-208ENST00000466618 FOCADQ5VW36 1801 aa17.61■□□□□ 0.41
SNED1-208ENST00000466618 ECM29Q5VYK3 1845 aa17.61■□□□□ 0.41
SNED1-208ENST00000466618 SLC27A2O14975 620 aa17.61■□□□□ 0.41
SNED1-208ENST00000466618 POTEIP0CG38 1075 aa17.61■□□□□ 0.41
SNED1-208ENST00000466618 POTEJP0CG39 1038 aa17.61■□□□□ 0.41
SNED1-208ENST00000466618 PLCD1P51178 756 aa17.61■□□□□ 0.41
SNED1-208ENST00000466618 ZBTB9Q96C00 473 aa17.61■□□□□ 0.41
SNED1-208ENST00000466618 TEPSINQ96N21 525 aa17.61■□□□□ 0.41
SNED1-208ENST00000466618 DEFB129Q9H1M3 183 aa17.61■□□□□ 0.41
SNED1-208ENST00000466618 TAF6LQ9Y6J9 622 aa17.61■□□□□ 0.41
SNED1-208ENST00000466618 CDK5RAP2Q96SN8 1893 aa17.61■□□□□ 0.41
SNED1-208ENST00000466618 BECN2A8MW95 431 aa17.6■□□□□ 0.41
SNED1-208ENST00000466618 OAS2P29728 719 aaKnown RBP17.6■□□□□ 0.41
SNED1-208ENST00000466618 TNNI2P48788 182 aa17.6■□□□□ 0.41
SNED1-208ENST00000466618 PPARAQ07869 468 aa17.6■□□□□ 0.41
SNED1-208ENST00000466618 RESTQ13127 1097 aa17.6■□□□□ 0.41
SNED1-208ENST00000466618 IMMTQ16891 758 aaKnown RBP17.6■□□□□ 0.41
SNED1-208ENST00000466618 TSGA10IPQ3SY00 556 aa17.6■□□□□ 0.41
SNED1-208ENST00000466618 EAPPQ56P03 285 aaPredicted RBP17.6■□□□□ 0.41
SNED1-208ENST00000466618 TMEM39BQ9GZU3 492 aa17.6■□□□□ 0.41
SNED1-208ENST00000466618 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.6■□□□□ 0.41
SNED1-208ENST00000466618 ZNF213O14771 459 aa17.6■□□□□ 0.41
SNED1-208ENST00000466618 ATP8B1O43520 1251 aa17.6■□□□□ 0.41
SNED1-208ENST00000466618 TBC1D8O95759 1140 aa17.6■□□□□ 0.41
SNED1-208ENST00000466618 ZSCAN26Q16670 478 aa17.6■□□□□ 0.41
SNED1-208ENST00000466618 ARMCX5Q6P1M9 558 aa17.6■□□□□ 0.41
SNED1-208ENST00000466618 METTL16Q86W50 562 aaKnown RBP17.6■□□□□ 0.41
SNED1-208ENST00000466618 RGS22Q8NE09 1264 aa17.6■□□□□ 0.41
SNED1-208ENST00000466618 ZFP91Q96JP5 570 aaPredicted RBP17.6■□□□□ 0.41
SNED1-208ENST00000466618 ZCCHC17Q9NP64 241 aaKnown RBP17.6■□□□□ 0.41
SNED1-208ENST00000466618 ROBO3Q96MS0 1386 aa17.6■□□□□ 0.41
SNED1-208ENST00000466618 TADA3O75528 432 aa17.59■□□□□ 0.41
SNED1-208ENST00000466618 POLR3DP05423 398 aaPredicted RBP17.59■□□□□ 0.41
SNED1-208ENST00000466618 KCNJ6P48051 423 aa17.59■□□□□ 0.41
SNED1-208ENST00000466618 CDAN1Q8IWY9 1227 aa17.59■□□□□ 0.41
SNED1-208ENST00000466618 DCPSQ96C86 337 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms