RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 MYH8P13535 1937 aa21.01■□□□□ 0.95
COL7A1-206ENST00000466591 MKI67P46013 3256 aaKnown RBP21.01■□□□□ 0.95
COL7A1-206ENST00000466591 SPDYE16A6NNV3 312 aaPredicted RBP21■□□□□ 0.95
COL7A1-206ENST00000466591 MINDY4BA8MYZ0 360 aa21■□□□□ 0.95
COL7A1-206ENST00000466591 ERC2O15083 957 aa21■□□□□ 0.95
COL7A1-206ENST00000466591 TSHZ3Q63HK5 1081 aa21■□□□□ 0.95
COL7A1-206ENST00000466591 UBE2Q1Q7Z7E8 422 aa21■□□□□ 0.95
COL7A1-206ENST00000466591 DPP9Q86TI2 863 aa21■□□□□ 0.95
COL7A1-206ENST00000466591 STK11IPQ8N1F8 1099 aa21■□□□□ 0.95
COL7A1-206ENST00000466591 KBTBD3Q8NAB2 608 aa21■□□□□ 0.95
COL7A1-206ENST00000466591 PUS7LQ9H0K6 701 aaKnown RBP21■□□□□ 0.95
COL7A1-206ENST00000466591 GOPCQ9HD26 462 aa21■□□□□ 0.95
COL7A1-206ENST00000466591 PCDH10Q9P2E7 1040 aa21■□□□□ 0.95
COL7A1-206ENST00000466591 A0A1W2PRG0 241 aa20.99■□□□□ 0.95
COL7A1-206ENST00000466591 SLC15A5A6NIM6 579 aa20.99■□□□□ 0.95
COL7A1-206ENST00000466591 CHGBP05060 677 aa20.99■□□□□ 0.95
COL7A1-206ENST00000466591 ZFYP08048 801 aaPredicted RBP20.99■□□□□ 0.95
COL7A1-206ENST00000466591 CNGA1P29973 690 aa20.99■□□□□ 0.95
COL7A1-206ENST00000466591 TDO2P48775 406 aa20.99■□□□□ 0.95
COL7A1-206ENST00000466591 CCL14Q16627 93 aa20.99■□□□□ 0.95
COL7A1-206ENST00000466591 MORN1Q5T089 497 aa20.99■□□□□ 0.95
COL7A1-206ENST00000466591 CLEC10AQ8IUN9 316 aa20.99■□□□□ 0.95
COL7A1-206ENST00000466591 C11orf49Q9H6J7 331 aa20.99■□□□□ 0.95
COL7A1-206ENST00000466591 BTBD7Q9P203 1132 aa20.99■□□□□ 0.95
COL7A1-206ENST00000466591 MYH7P12883 1935 aa20.99■□□□□ 0.95
COL7A1-206ENST00000466591 CNMDO75829 334 aa20.98■□□□□ 0.95
COL7A1-206ENST00000466591 PTPREP23469 700 aa20.98■□□□□ 0.95
COL7A1-206ENST00000466591 CACNB2Q08289 660 aaPredicted RBP20.98■□□□□ 0.95
COL7A1-206ENST00000466591 LBX2Q6XYB7 198 aa20.98■□□□□ 0.95
COL7A1-206ENST00000466591 C16orf86Q6ZW13 317 aa20.98■□□□□ 0.95
COL7A1-206ENST00000466591 NCAPG2Q86XI2 1143 aa20.98■□□□□ 0.95
COL7A1-206ENST00000466591 MB21D1Q8N884 522 aa20.98■□□□□ 0.95
COL7A1-206ENST00000466591 DIS3LQ8TF46 1054 aaKnown RBP20.98■□□□□ 0.95
COL7A1-206ENST00000466591 APPBP2Q92624 585 aa20.98■□□□□ 0.95
COL7A1-206ENST00000466591 KANSL2Q9H9L4 492 aa20.98■□□□□ 0.95
COL7A1-206ENST00000466591 ZNF287Q9HBT7 754 aa20.98■□□□□ 0.95
COL7A1-206ENST00000466591 SLC5A4Q9NY91 659 aa20.98■□□□□ 0.95
COL7A1-206ENST00000466591 BAZ2AQ9UIF9 1905 aaKnown RBP20.98■□□□□ 0.95
COL7A1-206ENST00000466591 RNF113AO15541 343 aaKnown RBP20.97■□□□□ 0.95
COL7A1-206ENST00000466591 GNAT2P19087 354 aa20.97■□□□□ 0.95
COL7A1-206ENST00000466591 CTR9Q6PD62 1173 aa20.97■□□□□ 0.95
COL7A1-206ENST00000466591 C7orf61Q8IZ16 206 aa20.97■□□□□ 0.95
COL7A1-206ENST00000466591 FSD1Q9BTV5 496 aa20.97■□□□□ 0.95
COL7A1-206ENST00000466591 VCPKMTQ9H867 229 aa20.97■□□□□ 0.95
COL7A1-206ENST00000466591 TMX2Q9Y320 296 aa20.97■□□□□ 0.95
COL7A1-206ENST00000466591 WDR46O15213 610 aaKnown RBP20.96■□□□□ 0.95
COL7A1-206ENST00000466591 EEF2P13639 858 aaKnown RBP20.96■□□□□ 0.95
COL7A1-206ENST00000466591 CCND3P30281 292 aaPredicted RBP20.96■□□□□ 0.95
COL7A1-206ENST00000466591 NACAP1Q9BZK3 213 aa20.96■□□□□ 0.95
COL7A1-206ENST00000466591 SPATC1LQ9H0A9 340 aa20.96■□□□□ 0.95
COL7A1-206ENST00000466591 CTDP1Q9Y5B0 961 aaPredicted RBP20.96■□□□□ 0.95
COL7A1-206ENST00000466591 PLXNB2O15031 1838 aa20.95■□□□□ 0.94
COL7A1-206ENST00000466591 MAP3K21Q5TCX8 1036 aa20.95■□□□□ 0.94
COL7A1-206ENST00000466591 USP6NLQ92738 828 aa20.95■□□□□ 0.94
COL7A1-206ENST00000466591 YTHDC1Q96MU7 727 aaKnown RBP20.95■□□□□ 0.94
COL7A1-206ENST00000466591 STRBPQ96SI9 672 aaKnown RBP20.95■□□□□ 0.94
COL7A1-206ENST00000466591 MOV10L1Q9BXT6 1211 aaKnown RBP20.95■□□□□ 0.94
COL7A1-206ENST00000466591 OGDHLQ9ULD0 1010 aa20.95■□□□□ 0.94
COL7A1-206ENST00000466591 TTC41PQ6P2S7 1318 aa20.95■□□□□ 0.94
COL7A1-206ENST00000466591 GPAA1O43292 621 aa20.94■□□□□ 0.94
COL7A1-206ENST00000466591 STRNO43815 780 aa20.94■□□□□ 0.94
COL7A1-206ENST00000466591 DSG3P32926 999 aa20.94■□□□□ 0.94
COL7A1-206ENST00000466591 RRP1P56182 461 aaKnown RBP20.94■□□□□ 0.94
COL7A1-206ENST00000466591 GRB14Q14449 540 aa20.94■□□□□ 0.94
COL7A1-206ENST00000466591 GIMAP6Q6P9H5 292 aa20.94■□□□□ 0.94
COL7A1-206ENST00000466591 ZNF444Q8N0Y2 327 aaPredicted RBP20.94■□□□□ 0.94
COL7A1-206ENST00000466591 MROH8Q9H579 483 aa20.94■□□□□ 0.94
COL7A1-206ENST00000466591 RBM27Q9P2N5 1060 aaKnown RBP20.94■□□□□ 0.94
COL7A1-206ENST00000466591 ISY1Q9ULR0 285 aaKnown RBP20.94■□□□□ 0.94
COL7A1-206ENST00000466591 SLC3A2P08195 630 aaKnown RBP20.93■□□□□ 0.94
COL7A1-206ENST00000466591 ERCC3P19447 782 aa20.93■□□□□ 0.94
COL7A1-206ENST00000466591 ADORA2AP29274 412 aa20.93■□□□□ 0.94
COL7A1-206ENST00000466591 FXR1P51114 621 aaKnown RBP eCLIP20.93■□□□□ 0.94
COL7A1-206ENST00000466591 POTEEQ6S8J3 1075 aa20.93■□□□□ 0.94
COL7A1-206ENST00000466591 ATG4CQ96DT6 458 aa20.93■□□□□ 0.94
COL7A1-206ENST00000466591 MSCO60682 206 aa20.92■□□□□ 0.94
COL7A1-206ENST00000466591 MYCNP04198 464 aaPredicted RBP20.92■□□□□ 0.94
COL7A1-206ENST00000466591 SHCBP1Q8NEM2 672 aa20.92■□□□□ 0.94
COL7A1-206ENST00000466591 OSBP2Q969R2 916 aa20.92■□□□□ 0.94
COL7A1-206ENST00000466591 SMIM22K7EJ46 135 aa20.91■□□□□ 0.94
COL7A1-206ENST00000466591 FCER1AP12319 257 aa20.91■□□□□ 0.94
COL7A1-206ENST00000466591 MX1P20591 662 aa20.91■□□□□ 0.94
COL7A1-206ENST00000466591 CYP2C19P33261 490 aa20.91■□□□□ 0.94
COL7A1-206ENST00000466591 SBK1Q52WX2 424 aa20.91■□□□□ 0.94
COL7A1-206ENST00000466591 KIAA1755Q5JYT7 1200 aa20.91■□□□□ 0.94
COL7A1-206ENST00000466591 ZMYND8Q9ULU4 1186 aaPredicted RBP20.91■□□□□ 0.94
COL7A1-206ENST00000466591 PCDHB15Q9Y5E8 787 aa20.91■□□□□ 0.94
COL7A1-206ENST00000466591 GSG1L2A8MUP6 293 aa20.9■□□□□ 0.94
COL7A1-206ENST00000466591 M0R2C6 588 aa20.9■□□□□ 0.94
COL7A1-206ENST00000466591 SLC25A27O95847 323 aa20.9■□□□□ 0.94
COL7A1-206ENST00000466591 HOXC6P09630 235 aa20.9■□□□□ 0.94
COL7A1-206ENST00000466591 FAM83BQ5T0W9 1011 aa20.9■□□□□ 0.94
COL7A1-206ENST00000466591 ANKRD45Q5TZF3 282 aa20.9■□□□□ 0.94
COL7A1-206ENST00000466591 NPLOC4Q8TAT6 608 aa20.9■□□□□ 0.94
COL7A1-206ENST00000466591 MMP19Q99542 508 aa20.9■□□□□ 0.94
COL7A1-206ENST00000466591 NAPBQ9H115 298 aa20.9■□□□□ 0.94
COL7A1-206ENST00000466591 FLRT1Q9NZU1 646 aa20.9■□□□□ 0.94
COL7A1-206ENST00000466591 DDX20Q9UHI6 824 aaKnown RBP20.9■□□□□ 0.94
COL7A1-206ENST00000466591 SLC4A3P48751 1232 aa20.89■□□□□ 0.93
COL7A1-206ENST00000466591 PDE4BQ07343 736 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms